Protein ID | Ani_SJS72_1|g11004.t1 |
Gene name | |
Location | scaffold_176:6726..8409 |
Strand | + |
Gene length (bp) | 1683 |
Transcript length (bp) | 1476 |
Coding sequence length (bp) | 1476 |
Protein length (aa) | 492 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00324 | AA_permease | Amino acid permease | 2.2E-104 | 1 | 448 |
PF13520 | AA_permease_2 | Amino acid permease | 9.7E-28 | 2 | 435 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016020 | membrane | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005215 | transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
2 | 65 | 87 | 22 |
3 | 108 | 126 | 18 |
4 | 141 | 160 | 19 |
5 | 220 | 239 | 19 |
6 | 272 | 294 | 22 |
7 | 315 | 337 | 22 |
8 | 347 | 369 | 22 |
9 | 393 | 415 | 22 |
10 | 425 | 447 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g11004.t1 MVSLGSAIGMGMWLGSGTSLVDGGPASLFIGYLISSSMVWSVSQSIGEMAVMYPLPSAFVQWSTIFVSPAAGFAL GWGYWFSYWITIANELQGIITILNYWTDEVPKVAWISIFWVVIILINIWVVKLFAEVEVVASTVKFGWMLVIIPA LIVITAGGSPQEGPIGFRYWNEQAFRNGFKGFLSILPTCIFAMAGTESAAMVASEVANPRISVPKAVRSIWIRLG LFYILGSLMITLSVDPTDPNLFGSSGSNASPFVIAFKNAGIPVMAHITNAVIFISMLSTGSISGYGGSRMLMGLA HVGMNHRIFGKADRIGRPWAGYIATIGIGGALSYINVSNTGAQVFQWLSNLVSLLTLFGWGLISLSHLRFRYSWK VQGRDETHLPWRTMAYPYATWWALIWCIVLIGLELYLSIWPLGKSTSAKNFFASYISVIAVIIIWIGAQIWYRGP LWVDAREIDLDRWRRYYADRVDEESIPVRKSLVRRMKALIE* |
Coding | >Ani_SJS72_1|g11004.t1 ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGCCCT GCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCCCTG GGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACTCCAGGGCATCATAACTATCCTCAACTAC TGGACCGATGAAGTCCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTC GTCAAGCTATTCGCCGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCC CTCATCGTAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATTC CGAAACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCA ATGGTAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGGG CTCTTCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCA GGAAGCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGCC GTGATCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCG CATGTGGGTATGAATCATAGGATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATCGCCACG ATCGGGATAGGAGGCGCCCTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTTATCCAAC CTAGTCTCGCTCCTCACGCTCTTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGCTGGAAG GTTCAAGGTCGGGATGAGACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGCACTGATC TGGTGTATTGTATTGATCGGGTTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCGAAGAAC TTCTTTGCGAGCTATATCAGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCGCGGCCCG CTCTGGGTGGATGCGAGGGAGATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAGGAGTCA ATTCCGGTGAGAAAGTCGCTGGTAAGGAGGATGAAGGCGCTTATTGAGTGA |
Transcript | >Ani_SJS72_1|g11004.t1 ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGCCCT GCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCCCTG GGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACTCCAGGGCATCATAACTATCCTCAACTAC TGGACCGATGAAGTCCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTC GTCAAGCTATTCGCCGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCC CTCATCGTAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATTC CGAAACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCA ATGGTAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGGG CTCTTCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCA GGAAGCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGCC GTGATCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCG CATGTGGGTATGAATCATAGGATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATCGCCACG ATCGGGATAGGAGGCGCCCTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTTATCCAAC CTAGTCTCGCTCCTCACGCTCTTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGCTGGAAG GTTCAAGGTCGGGATGAGACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGCACTGATC TGGTGTATTGTATTGATCGGGTTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCGAAGAAC TTCTTTGCGAGCTATATCAGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCGCGGCCCG CTCTGGGTGGATGCGAGGGAGATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAGGAGTCA ATTCCGGTGAGAAAGTCGCTGGTAAGGAGGATGAAGGCGCTTATTGAGTGA |
Gene | >Ani_SJS72_1|g11004.t1 ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGCCCT GCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCCCTG GGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACTCCAGGTATTACCTACCCTACCATTTGGA TCTATCATCCTAGGCTTATCTGTTCTGTCGAATCCAGGGCATCATAACTATCCTCAACTACTGGACCGATGAAGT CCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTCGTCAAGCTATTCGC CGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCCCTCATCGGTATGTT CTTCAATATCTATTCATTCCAGCTACATCGACATCAACATCAAAACAAATACTAACATGCAGCTACCTTCAAACT CAGTAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATTCCGAA ACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCAATGG TAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGGGCTCT TCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCAGGAA GCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGCCGTGA TCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCGCATG TGGGTATGAATCATAGGGTATGTGTGCTTGGTTTGCAGTAATGAGCTCGTTCGTCAAATCGACTAATAGATTGCC CAGATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATCGCCACGATCGGGATAGGAGGCGCC CTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTTATCCAACCTAGTCTCGCTCCTCACG CTCTTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGCTGGAAGGTTCAAGGTCGGGATGAG ACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGCACTGATCTGGTGTATTGTATTGATC GGGTTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCGAAGAACTTCTTTGCGAGCTATATC AGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCGCGGCCCGCTCTGGGTGGATGCGAGG GAGATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAGGAGTCAATTCCGGTGAGAAAGTCG CTGGTAAGGAGGATGAAGGCGCTTATTGAGTGA |