© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g11004.t1 |
| Gene name | |
| Location | scaffold_176:6726..8409 |
| Strand | + |
| Gene length (bp) | 1683 |
| Transcript length (bp) | 1476 |
| Coding sequence length (bp) | 1476 |
| Protein length (aa) | 492 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 2.2E-104 | 1 | 448 |
| PF13520 | AA_permease_2 | Amino acid permease | 9.7E-28 | 2 | 435 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 65 | 87 | 22 |
| 3 | 108 | 126 | 18 |
| 4 | 141 | 160 | 19 |
| 5 | 220 | 239 | 19 |
| 6 | 272 | 294 | 22 |
| 7 | 315 | 337 | 22 |
| 8 | 347 | 369 | 22 |
| 9 | 393 | 415 | 22 |
| 10 | 425 | 447 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 9468 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g11004.t1 MVSLGSAIGMGMWLGSGTSLVDGGPASLFIGYLISSSMVWSVSQSIGEMAVMYPLPSAFVQWSTIFVSPAAGFAL GWGYWFSYWITIANELQGIITILNYWTDEVPKVAWISIFWVVIILINIWVVKLFAEVEVVASTVKFGWMLVIIPA LIVITAGGSPQEGPIGFRYWNEQAFRNGFKGFLSILPTCIFAMAGTESAAMVASEVANPRISVPKAVRSIWIRLG LFYILGSLMITLSVDPTDPNLFGSSGSNASPFVIAFKNAGIPVMAHITNAVIFISMLSTGSISGYGGSRMLMGLA HVGMNHRIFGKADRIGRPWAGYIATIGIGGALSYINVSNTGAQVFQWLSNLVSLLTLFGWGLISLSHLRFRYSWK VQGRDETHLPWRTMAYPYATWWALIWCIVLIGLELYLSIWPLGKSTSAKNFFASYISVIAVIIIWIGAQIWYRGP LWVDAREIDLDRWRRYYADRVDEESIPVRKSLVRRMKALIE* |
| Coding | >Ani_SJS72_1|g11004.t1 ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGCCCT GCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCCCTG GGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACTCCAGGGCATCATAACTATCCTCAACTAC TGGACCGATGAAGTCCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTC GTCAAGCTATTCGCCGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCC CTCATCGTAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATTC CGAAACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCA ATGGTAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGGG CTCTTCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCA GGAAGCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGCC GTGATCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCG CATGTGGGTATGAATCATAGGATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATCGCCACG ATCGGGATAGGAGGCGCCCTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTTATCCAAC CTAGTCTCGCTCCTCACGCTCTTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGCTGGAAG GTTCAAGGTCGGGATGAGACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGCACTGATC TGGTGTATTGTATTGATCGGGTTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCGAAGAAC TTCTTTGCGAGCTATATCAGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCGCGGCCCG CTCTGGGTGGATGCGAGGGAGATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAGGAGTCA ATTCCGGTGAGAAAGTCGCTGGTAAGGAGGATGAAGGCGCTTATTGAGTGA |
| Transcript | >Ani_SJS72_1|g11004.t1 ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGCCCT GCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCCCTG GGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACTCCAGGGCATCATAACTATCCTCAACTAC TGGACCGATGAAGTCCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTC GTCAAGCTATTCGCCGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCC CTCATCGTAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATTC CGAAACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCA ATGGTAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGGG CTCTTCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCA GGAAGCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGCC GTGATCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCG CATGTGGGTATGAATCATAGGATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATCGCCACG ATCGGGATAGGAGGCGCCCTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTTATCCAAC CTAGTCTCGCTCCTCACGCTCTTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGCTGGAAG GTTCAAGGTCGGGATGAGACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGCACTGATC TGGTGTATTGTATTGATCGGGTTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCGAAGAAC TTCTTTGCGAGCTATATCAGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCGCGGCCCG CTCTGGGTGGATGCGAGGGAGATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAGGAGTCA ATTCCGGTGAGAAAGTCGCTGGTAAGGAGGATGAAGGCGCTTATTGAGTGA |
| Gene | >Ani_SJS72_1|g11004.t1 ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGCCCT GCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCCCTG GGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACTCCAGGTATTACCTACCCTACCATTTGGA TCTATCATCCTAGGCTTATCTGTTCTGTCGAATCCAGGGCATCATAACTATCCTCAACTACTGGACCGATGAAGT CCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTCGTCAAGCTATTCGC CGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCCCTCATCGGTATGTT CTTCAATATCTATTCATTCCAGCTACATCGACATCAACATCAAAACAAATACTAACATGCAGCTACCTTCAAACT CAGTAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATTCCGAA ACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCAATGG TAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGGGCTCT TCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCAGGAA GCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGCCGTGA TCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCGCATG TGGGTATGAATCATAGGGTATGTGTGCTTGGTTTGCAGTAATGAGCTCGTTCGTCAAATCGACTAATAGATTGCC CAGATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATCGCCACGATCGGGATAGGAGGCGCC CTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTTATCCAACCTAGTCTCGCTCCTCACG CTCTTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGCTGGAAGGTTCAAGGTCGGGATGAG ACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGCACTGATCTGGTGTATTGTATTGATC GGGTTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCGAAGAACTTCTTTGCGAGCTATATC AGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCGCGGCCCGCTCTGGGTGGATGCGAGG GAGATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAGGAGTCAATTCCGGTGAGAAAGTCG CTGGTAAGGAGGATGAAGGCGCTTATTGAGTGA |