© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g110.t1 |
| Gene name | |
| Location | scaffold_001:325019..326110 |
| Strand | - |
| Gene length (bp) | 1091 |
| Transcript length (bp) | 747 |
| Coding sequence length (bp) | 747 |
| Protein length (aa) | 249 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04750 | Far-17a_AIG1 | FAR-17a/AIG1-like protein | 1.1E-72 | 26 | 224 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 62 | 81 | 19 |
| 3 | 94 | 116 | 22 |
| 4 | 131 | 153 | 22 |
| 5 | 160 | 178 | 18 |
| 6 | 202 | 224 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g110.t1 MASSATIRSLQRKHPLQRLSSPSRGFSALVHSLGLASFFFSFKYMHENPNRANEAYGWHFQYLTVIGLTLATLTF TAGLLADMTLSARLFLAKNLLSVCSAPMEVLISILYWGLRLIDKRLVVPDWVILPMHADVGFHAVPSIVLLIDLL FLSPPWTITVLPALALSSTIAFGYWFWIERCFQFNGWYPYPVFDAVGFEGRVGLFALSAVVMALSTGTLKWLYGR VNGYGTSAKAQSRPGAIKSNGSI* |
| Coding | >Ani_SJS72_1|g110.t1 ATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATCCCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGC TTCTCGGCCTTGGTCCATTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGTTCAAGTACATGCACGAGAACCCCAAT AGGGCTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCTGACGCTGGCCACGCTCACCTTT ACCGCCGGTCTGCTGGCGGATATGACGTTATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGC GCTCCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGATCGACAAGCGTTTGGTTGTTCCTGAT TGGGTGATACTTCCTATGCATGCCGACGTCGGCTTCCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTT TTTCTTTCCCCTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATCGCTTTTGGATACTGG TTTTGGATCGAACGTTGCTTCCAGTTCAACGGATGGTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGT CGCGTTGGACTCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAATGGCTCTATGGCCGC GTGAACGGATACGGAACGAGCGCCAAAGCCCAGTCTCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTAA |
| Transcript | >Ani_SJS72_1|g110.t1 ATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATCCCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGC TTCTCGGCCTTGGTCCATTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGTTCAAGTACATGCACGAGAACCCCAAT AGGGCTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCTGACGCTGGCCACGCTCACCTTT ACCGCCGGTCTGCTGGCGGATATGACGTTATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGC GCTCCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGATCGACAAGCGTTTGGTTGTTCCTGAT TGGGTGATACTTCCTATGCATGCCGACGTCGGCTTCCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTT TTTCTTTCCCCTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATCGCTTTTGGATACTGG TTTTGGATCGAACGTTGCTTCCAGTTCAACGGATGGTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGT CGCGTTGGACTCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAATGGCTCTATGGCCGC GTGAACGGATACGGAACGAGCGCCAAAGCCCAGTCTCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTAA |
| Gene | >Ani_SJS72_1|g110.t1 ATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATCCCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGC TTCTCGGCCTTGGTCCATGTGAGCACTTATCCGTGTCGGTCGCTCGTTCCTTGGGCTGATGTTTCTTTCCCCCAT GGCAGTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGTTCAAGTAGTACGTTGAGTTCCGCTACAGCTCGTGCTCCC CGGTGCTCGGCCCGCCCACTAACCAACCGTTCTCTAGCATGCACGAGAACCCCAATAGGGCGTAAGCTCCCCATG TCCTTGGCCTGGAGTAACCAGGATGCTGATTGACCCTTCCTGACAGTAATGAAGCATATGGCTGGCATTTCCAGT ACCTGACCGTCATTGGGCTGACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGTTATCGG CTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCTCCAATGGAAGTGTTGATCAGCATCCTATACT GGGGGCTCCGTCTGGTAATTACTTTCCTCATGGTCGATTAGAATGCCATCTAATTGTCCAACAGATCGACAAGCG TTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGCCGGTAAGCCGGACTCGGATCTACTTGAAGTCTCATC TTGCTAATATCGAGTGCAAGACGTCGGCTTCCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCT TTCCCCTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATCGCTTTTGGATACTGGTTTTG GATCGAACGTTGCTTCCAGTTCAACGGATGGTACGTCTTGTATTTGCCTTTATGGAGATGCGACTTACTGACCGC ACAGGTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGACTCTTCGCCTTGAGCGCCGTTG TCATGGCGCTGAGCACGGGAACCCTCAAATGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCC AGTCTCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTAA |