Protein ID | Ani_SJS72_1|g10984.t1 |
Gene name | |
Location | scaffold_173:23658..24762 |
Strand | + |
Gene length (bp) | 1104 |
Transcript length (bp) | 1104 |
Coding sequence length (bp) | 1104 |
Protein length (aa) | 368 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01040 | UbiA | UbiA prenyltransferase family | 3.3E-41 | 82 | 349 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0003824 | catalytic activity | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0003674 | molecular_function | No |
GO:0016740 | transferase activity | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 71 | 93 | 22 |
2 | 100 | 122 | 22 |
3 | 161 | 183 | 22 |
4 | 204 | 223 | 19 |
5 | 233 | 255 | 22 |
6 | 285 | 307 | 22 |
7 | 311 | 330 | 19 |
8 | 337 | 359 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 1611 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g10984.t1 MSEYSTPLRQSSPLGMHRKTQGKKQTAKDQSKSMSPMTPPTVEAQYGGNDKSGVLQVFPSAWLPYLQLIRLWPPA ALLLIFFPHAFGILHAAIKSQAPAEYVLRTSITIFGGCFFFSNAAHTWNDLIDAPLDAQVERTRKRPIPRGSITP KAAILFGATQVLGAVIFLACMPLGLWTSGLYALPNIISTTYYPFAKRHTRFPQLVLGFCLAWGVVMGELAMGVQP LAYSPDAAGITVDTSVIFLVTGTALWVLIYDTIYAHQDLQADLKVGIKSLAVLLQDRTKAVLWPVLLLMTGLLVE AGRASGLGTSYHLFAVGGASLSLGLMVWCVDLQDSRSCWWWFSNGFWWTGGTIMIGLLVEYSMQVRF* |
Coding | >Ani_SJS72_1|g10984.t1 ATGTCGGAATATTCTACACCTTTACGACAGTCAAGTCCGCTTGGGATGCATCGAAAGACCCAAGGCAAAAAGCAA ACAGCTAAGGACCAGTCAAAGTCTATGTCACCGATGACACCACCTACGGTGGAGGCTCAGTATGGAGGCAATGAC AAGTCTGGCGTCCTACAAGTATTCCCGTCCGCTTGGTTGCCATATCTACAGCTGATTCGCCTTTGGCCTCCAGCC GCTCTTCTGCTCATTTTTTTCCCGCACGCGTTTGGCATCCTGCATGCGGCAATAAAATCCCAGGCACCTGCGGAG TACGTCCTGCGAACCAGTATTACAATCTTTGGGGGTTGTTTCTTCTTCTCCAACGCAGCTCACACATGGAATGAT TTGATCGACGCACCCTTGGACGCCCAAGTGGAACGGACCCGCAAAAGACCCATTCCTCGTGGTTCCATCACACCT AAAGCAGCCATTCTCTTCGGCGCCACACAGGTGCTAGGTGCCGTCATCTTTCTCGCATGCATGCCGTTAGGACTA TGGACTTCCGGTTTATACGCCTTGCCTAACATCATCAGTACGACCTATTACCCGTTCGCTAAGCGGCATACTCGG TTCCCACAGCTCGTACTCGGGTTTTGCCTCGCATGGGGTGTGGTCATGGGGGAGCTGGCTATGGGAGTGCAGCCC TTAGCTTACTCCCCGGACGCAGCCGGTATCACTGTCGACACTTCGGTCATCTTCCTCGTAACGGGAACTGCTTTG TGGGTACTCATCTATGACACCATCTACGCACATCAGGACCTTCAAGCCGATCTGAAAGTTGGTATCAAGAGTTTA GCAGTGCTGTTGCAAGATCGTACCAAAGCGGTGTTGTGGCCCGTCCTGCTGCTTATGACCGGCCTTCTGGTGGAA GCTGGCCGAGCGAGTGGGCTGGGGACATCGTATCACCTGTTTGCCGTGGGCGGGGCCAGTTTGTCTCTCGGTCTT ATGGTGTGGTGTGTAGATCTGCAGGATAGTCGGAGCTGTTGGTGGTGGTTTAGCAACGGCTTCTGGTGGACTGGA GGGACTATCATGATCGGGCTGCTGGTGGAATATTCCATGCAGGTCAGATTTTAG |
Transcript | >Ani_SJS72_1|g10984.t1 ATGTCGGAATATTCTACACCTTTACGACAGTCAAGTCCGCTTGGGATGCATCGAAAGACCCAAGGCAAAAAGCAA ACAGCTAAGGACCAGTCAAAGTCTATGTCACCGATGACACCACCTACGGTGGAGGCTCAGTATGGAGGCAATGAC AAGTCTGGCGTCCTACAAGTATTCCCGTCCGCTTGGTTGCCATATCTACAGCTGATTCGCCTTTGGCCTCCAGCC GCTCTTCTGCTCATTTTTTTCCCGCACGCGTTTGGCATCCTGCATGCGGCAATAAAATCCCAGGCACCTGCGGAG TACGTCCTGCGAACCAGTATTACAATCTTTGGGGGTTGTTTCTTCTTCTCCAACGCAGCTCACACATGGAATGAT TTGATCGACGCACCCTTGGACGCCCAAGTGGAACGGACCCGCAAAAGACCCATTCCTCGTGGTTCCATCACACCT AAAGCAGCCATTCTCTTCGGCGCCACACAGGTGCTAGGTGCCGTCATCTTTCTCGCATGCATGCCGTTAGGACTA TGGACTTCCGGTTTATACGCCTTGCCTAACATCATCAGTACGACCTATTACCCGTTCGCTAAGCGGCATACTCGG TTCCCACAGCTCGTACTCGGGTTTTGCCTCGCATGGGGTGTGGTCATGGGGGAGCTGGCTATGGGAGTGCAGCCC TTAGCTTACTCCCCGGACGCAGCCGGTATCACTGTCGACACTTCGGTCATCTTCCTCGTAACGGGAACTGCTTTG TGGGTACTCATCTATGACACCATCTACGCACATCAGGACCTTCAAGCCGATCTGAAAGTTGGTATCAAGAGTTTA GCAGTGCTGTTGCAAGATCGTACCAAAGCGGTGTTGTGGCCCGTCCTGCTGCTTATGACCGGCCTTCTGGTGGAA GCTGGCCGAGCGAGTGGGCTGGGGACATCGTATCACCTGTTTGCCGTGGGCGGGGCCAGTTTGTCTCTCGGTCTT ATGGTGTGGTGTGTAGATCTGCAGGATAGTCGGAGCTGTTGGTGGTGGTTTAGCAACGGCTTCTGGTGGACTGGA GGGACTATCATGATCGGGCTGCTGGTGGAATATTCCATGCAGGTCAGATTTTAG |
Gene | >Ani_SJS72_1|g10984.t1 ATGTCGGAATATTCTACACCTTTACGACAGTCAAGTCCGCTTGGGATGCATCGAAAGACCCAAGGCAAAAAGCAA ACAGCTAAGGACCAGTCAAAGTCTATGTCACCGATGACACCACCTACGGTGGAGGCTCAGTATGGAGGCAATGAC AAGTCTGGCGTCCTACAAGTATTCCCGTCCGCTTGGTTGCCATATCTACAGCTGATTCGCCTTTGGCCTCCAGCC GCTCTTCTGCTCATTTTTTTCCCGCACGCGTTTGGCATCCTGCATGCGGCAATAAAATCCCAGGCACCTGCGGAG TACGTCCTGCGAACCAGTATTACAATCTTTGGGGGTTGTTTCTTCTTCTCCAACGCAGCTCACACATGGAATGAT TTGATCGACGCACCCTTGGACGCCCAAGTGGAACGGACCCGCAAAAGACCCATTCCTCGTGGTTCCATCACACCT AAAGCAGCCATTCTCTTCGGCGCCACACAGGTGCTAGGTGCCGTCATCTTTCTCGCATGCATGCCGTTAGGACTA TGGACTTCCGGTTTATACGCCTTGCCTAACATCATCAGTACGACCTATTACCCGTTCGCTAAGCGGCATACTCGG TTCCCACAGCTCGTACTCGGGTTTTGCCTCGCATGGGGTGTGGTCATGGGGGAGCTGGCTATGGGAGTGCAGCCC TTAGCTTACTCCCCGGACGCAGCCGGTATCACTGTCGACACTTCGGTCATCTTCCTCGTAACGGGAACTGCTTTG TGGGTACTCATCTATGACACCATCTACGCACATCAGGACCTTCAAGCCGATCTGAAAGTTGGTATCAAGAGTTTA GCAGTGCTGTTGCAAGATCGTACCAAAGCGGTGTTGTGGCCCGTCCTGCTGCTTATGACCGGCCTTCTGGTGGAA GCTGGCCGAGCGAGTGGGCTGGGGACATCGTATCACCTGTTTGCCGTGGGCGGGGCCAGTTTGTCTCTCGGTCTT ATGGTGTGGTGTGTAGATCTGCAGGATAGTCGGAGCTGTTGGTGGTGGTTTAGCAACGGCTTCTGGTGGACTGGA GGGACTATCATGATCGGGCTGCTGGTGGAATATTCCATGCAGGTCAGATTTTAG |