© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g10969.t1 |
| Gene name | |
| Location | scaffold_172:11257..13141 |
| Strand | + |
| Gene length (bp) | 1884 |
| Transcript length (bp) | 1470 |
| Coding sequence length (bp) | 1470 |
| Protein length (aa) | 490 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.0E-34 | 43 | 412 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 60 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| 2 | 76 | 98 | 22 |
| 3 | 105 | 127 | 22 |
| 4 | 131 | 153 | 22 |
| 5 | 165 | 187 | 22 |
| 6 | 197 | 219 | 22 |
| 7 | 267 | 289 | 22 |
| 8 | 304 | 326 | 22 |
| 9 | 333 | 351 | 18 |
| 10 | 361 | 383 | 22 |
| 11 | 396 | 418 | 22 |
| 12 | 428 | 450 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10969.t1 MTVDEKQPVADNGESSPVPSQYATVNERKLMAKIDWHVVPCLCVMYLLAFLDRVNVSNAAILGLKSDLNIETGTK YNTALTIFFVPYIIFEIPSNVLMKKLKPHTWLSLCMFGFGLVMVCQGLVQNWGGLMTTRWFLGMFETGLFPGCFY LLGMWYKRSEAQKRFSFFFSSTTLAGAFGGLLAYGLGQMDGLRGYSGWRWVFIIEGVLTCVVAIGCFFVVPDFPE DAKWLTEEERAFLRDKLAKDVGKSAVDVSMSWRDIAAVFKDYKIFIGGLMYFGQVVTAYGYAYFAPTIIQTYGYS SVKTQLYSIPPWAASFGFSMLIAYLSDKFRHRFLFTIIPMLVAMAGFGILLNIHDTAQYHVQYGALFLVTSGCYS AMPVLVCWFAMNLGGHRRRSIGTAWQIGFGNIGGIISTYSFLSKDAPFYRPGYSIGVSFLAFSAAMSILYFLAVW NDNRKRDRAIAEGRIDPSTITEEDEELLGDMSPTYRYAY* |
| Coding | >Ani_SJS72_1|g10969.t1 ATGACCGTTGACGAGAAACAGCCGGTGGCTGACAATGGCGAGTCCTCGCCAGTACCGTCGCAATACGCCACTGTC AACGAGCGCAAATTGATGGCCAAAATTGACTGGCATGTAGTGCCGTGCCTTTGTGTCATGTACCTGCTCGCGTTC TTGGATCGTGTCAATGTCAGTAACGCAGCCATTCTGGGTCTCAAATCCGACTTGAATATCGAGACCGGCACCAAG TATAATACTGCCCTTACCATCTTTTTCGTCCCCTACATCATCTTCGAAATCCCATCCAATGTGCTGATGAAGAAG TTGAAGCCGCACACATGGTTGTCGCTGTGTATGTTCGGCTTCGGCCTGGTCATGGTCTGCCAGGGCTTGGTGCAG AATTGGGGAGGATTGATGACAACGCGCTGGTTCTTGGGCATGTTTGAGACGGGCTTGTTTCCTGGCTGCTTCTAC CTGCTGGGTATGTGGTATAAGCGCAGTGAAGCTCAGAAGCGCTTCAGTTTCTTCTTCAGTTCGACGACTCTGGCC GGTGCCTTTGGTGGCTTGCTCGCCTACGGTTTGGGACAGATGGACGGCCTCCGGGGGTACAGTGGATGGCGATGG GTGTTTATCATCGAGGGTGTTCTGACCTGCGTGGTGGCCATTGGCTGTTTCTTTGTGGTTCCCGACTTCCCCGAA GACGCCAAGTGGCTGACGGAGGAGGAGCGCGCATTCCTGCGCGACAAGCTGGCGAAGGACGTTGGAAAGTCGGCT GTCGATGTCAGCATGAGCTGGCGTGATATTGCCGCTGTCTTCAAGGACTACAAGATCTTCATCGGTGGCTTGATG TACTTTGGGCAGGTGGTTACGGCTTATGGCTATGCCTACTTTGCGCCGACCATTATCCAGACCTACGGCTACAGT TCCGTCAAAACCCAGCTCTACTCCATCCCACCCTGGGCCGCTTCGTTCGGCTTTTCCATGCTCATCGCATACCTC TCTGATAAATTCCGTCATCGCTTCCTATTCACTATCATCCCAATGCTCGTGGCCATGGCCGGATTTGGCATCTTG CTCAACATCCACGACACCGCACAATACCATGTCCAGTACGGCGCGCTCTTCCTGGTGACCAGCGGCTGCTACAGC GCGATGCCAGTGTTAGTCTGCTGGTTCGCGATGAACCTCGGTGGACATCGTCGACGCAGTATAGGAACGGCGTGG CAGATTGGTTTTGGCAACATTGGCGGAATCATCTCCACCTACTCCTTCCTCTCGAAAGACGCCCCCTTCTACCGG CCCGGATACAGCATCGGCGTATCCTTCCTGGCCTTTTCCGCCGCCATGTCGATTCTGTACTTTTTAGCGGTGTGG AACGACAACCGGAAACGCGACCGAGCGATCGCCGAGGGTCGCATCGATCCGTCCACCATCACAGAGGAAGACGAA GAATTGCTGGGCGATATGTCGCCGACGTACCGTTACGCTTATTGA |
| Transcript | >Ani_SJS72_1|g10969.t1 ATGACCGTTGACGAGAAACAGCCGGTGGCTGACAATGGCGAGTCCTCGCCAGTACCGTCGCAATACGCCACTGTC AACGAGCGCAAATTGATGGCCAAAATTGACTGGCATGTAGTGCCGTGCCTTTGTGTCATGTACCTGCTCGCGTTC TTGGATCGTGTCAATGTCAGTAACGCAGCCATTCTGGGTCTCAAATCCGACTTGAATATCGAGACCGGCACCAAG TATAATACTGCCCTTACCATCTTTTTCGTCCCCTACATCATCTTCGAAATCCCATCCAATGTGCTGATGAAGAAG TTGAAGCCGCACACATGGTTGTCGCTGTGTATGTTCGGCTTCGGCCTGGTCATGGTCTGCCAGGGCTTGGTGCAG AATTGGGGAGGATTGATGACAACGCGCTGGTTCTTGGGCATGTTTGAGACGGGCTTGTTTCCTGGCTGCTTCTAC CTGCTGGGTATGTGGTATAAGCGCAGTGAAGCTCAGAAGCGCTTCAGTTTCTTCTTCAGTTCGACGACTCTGGCC GGTGCCTTTGGTGGCTTGCTCGCCTACGGTTTGGGACAGATGGACGGCCTCCGGGGGTACAGTGGATGGCGATGG GTGTTTATCATCGAGGGTGTTCTGACCTGCGTGGTGGCCATTGGCTGTTTCTTTGTGGTTCCCGACTTCCCCGAA GACGCCAAGTGGCTGACGGAGGAGGAGCGCGCATTCCTGCGCGACAAGCTGGCGAAGGACGTTGGAAAGTCGGCT GTCGATGTCAGCATGAGCTGGCGTGATATTGCCGCTGTCTTCAAGGACTACAAGATCTTCATCGGTGGCTTGATG TACTTTGGGCAGGTGGTTACGGCTTATGGCTATGCCTACTTTGCGCCGACCATTATCCAGACCTACGGCTACAGT TCCGTCAAAACCCAGCTCTACTCCATCCCACCCTGGGCCGCTTCGTTCGGCTTTTCCATGCTCATCGCATACCTC TCTGATAAATTCCGTCATCGCTTCCTATTCACTATCATCCCAATGCTCGTGGCCATGGCCGGATTTGGCATCTTG CTCAACATCCACGACACCGCACAATACCATGTCCAGTACGGCGCGCTCTTCCTGGTGACCAGCGGCTGCTACAGC GCGATGCCAGTGTTAGTCTGCTGGTTCGCGATGAACCTCGGTGGACATCGTCGACGCAGTATAGGAACGGCGTGG CAGATTGGTTTTGGCAACATTGGCGGAATCATCTCCACCTACTCCTTCCTCTCGAAAGACGCCCCCTTCTACCGG CCCGGATACAGCATCGGCGTATCCTTCCTGGCCTTTTCCGCCGCCATGTCGATTCTGTACTTTTTAGCGGTGTGG AACGACAACCGGAAACGCGACCGAGCGATCGCCGAGGGTCGCATCGATCCGTCCACCATCACAGAGGAAGACGAA GAATTGCTGGGCGATATGTCGCCGACGTACCGTTACGCTTATTGA |
| Gene | >Ani_SJS72_1|g10969.t1 ATGACCGTTGACGGTACGTCCGACCGCGACCGGAATTATTCTTTGCGCTGGAACTTGATCGGCGCTCGAGTGTCC CAGATTTGACTGACTCGACTACAGAGAAACAGCCGGTGGCTGACAATGGCGAGTCCTCGCCAGTACCGTCGCAAT ACGCCACTGTCAACGAGCGCAAATTGATGGCCAAAATTGACTGGCATGTAGTGCCGTGCCTTTGTGTCATGTACC TGCTCGCGTTCTTGGATCGGTACGAATAATTTCATTTAAACTGGGAGTTTGACATTGGAACGCGTGAAGCTCATG GATTGCGCAGTGTCAATGTCAGTAACGCAGCCATTCTGGGTCTCAAATCCGACTTGAATATCGAGACCGGCACCA AGTATAATACTGCCCTTACCATCTTTTTCGTCCCCTACATCATCTTCGAAATCCCATCCAATGTGCTGATGAAGA AGTTGAAGCCGCACACATGGTGTACGTATTGCGCTGCGATGTTTAGGGCCACACTGACGAGCGTCTAGTGTCGCT GTGTATGTTCGGCTTCGGCCTGGTCATGGTCTGCCAGGGCTTGGTGCAGAATTGGGGAGGATTGATGACAACGCG CTGGTTCTTGGGCATGTTTGAGACGGGCTTGTTTCCTGGCTGTACGTGAGATTCAACACGATTCCATGGTCGCAT ACTGACTTGATAGGCTTCTACCTGCTGGGTATGTGGTATAAGCGCAGTGAAGCTCAGAAGCGCTTCAGTTTCTTC TTCAGTTCGACGACTCTGGCCGGTGCCTTTGGTGGCTTGCTCGCCTACGGTTTGGGACAGATGGACGGCCTCCGG GGGTACAGTGGATGGCGATGGGTGTTTATCATCGAGGGTGTTCTGACCTGCGTGGTGGCCATTGGCTGTTTCTTT GTGGTTCCCGACTTCCCCGAAGACGCCAAGTGGCTGACGGAGGAGGAGCGCGCATTCCTGCGCGACAAGCTGGCG AAGGACGTTGGAAAGTCGGCTGTCGATGTCAGCATGAGCTGGCGTGATATTGCCGCTGTCTTCAAGGACTGTAGG TTATCGGTGGCTGCGACGGCGATACAGCGCTAATGGTTTCGTGTGCAGACAAGATCTTCATCGGTGGCTTGATGT ACTTTGGGCAGGTGGTTACGGCTTATGGCTATGCCTACTTTGCGCCGACCATTATCCAGACCTACGGCTACAGTT GTATGTTCTTACCCTCAGAGCCCGGCTAACGGTGCAGTCGCTAACTTCCTCTCAGCCGTCAAAACCCAGCTCTAC TCCATCCCACCCTGGGCCGCTTCGTTCGGCTTTTCCATGCTCATCGCATACCTCTCTGATAAATTCCGTCATCGC TTCCTATTCACTATCATCCCAATGCTCGTGGCCATGGCCGGATTTGGCATCTTGCTCAACATCCACGACACCGCA CAATACCATGTCCAGTACGGCGCGCTCTTCCTGGTGACCAGCGGCTGCTACAGCGCGATGCCAGTGTTAGTCTGC TGGTTCGCGATGAACCTCGGTGGACATCGTCGACGCAGTATAGGAACGGCGTGGCAGATTGGTTTTGGCAACAGT AAGCACGGTCCTTATGCTCAGGCCCAATCGACCACTAACCAACCCTTTCACATCACAGTTGGCGGAATCATCTCC ACCTACTCCTTCCTCTCGAAAGACGCCCCCTTCTACCGGCCCGGATACAGCATCGGCGTATCCTTCCTGGCCTTT TCCGCCGCCATGTCGATTCTGTACTTTTTAGCGGTGTGGAACGACAACCGGAAACGCGACCGAGCGATCGCCGAG GGTCGCATCGATCCGTCCACCATCACAGAGGAAGACGAAGAATTGCTGGGCGATATGTCGCCGACGTACCGTTAC GCTTATTGA |