Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g10940.t1
Gene name
Locationscaffold_169:31236..32100
Strand-
Gene length (bp)864
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 77 99 22
3 109 131 22
4 136 158 22
5 173 195 22
6 204 221 17
7 234 251 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g10940.t1
MPPALSDLYEQATQTQPVDWYGIWVAALLGVWLLTRLAYQLGRWTVQRHIAASIGRRLGRELPWLLQAIDIAIAL
EAILVGVLLGANIVLLLVSAHGWADVQQRAVKLAVLNLLALGTGLTFGLPAYLLGISYSAVAWSHCWVGRVMAAH
SLLHGAIAIARAENPIASLRHDWVPLLAAAAVLLMIPVTLHAVVRQHCQVAMKIHYSLAVTAMVALAYHTWDQGS
ESCWQVVDVGILWIMLSAVAVSYAVFI*
Coding >Ani_SJS72_1|g10940.t1
ATGCCTCCAGCACTCTCAGACCTGTATGAACAGGCTACCCAAACCCAGCCCGTTGACTGGTACGGGATATGGGTT
GCTGCTTTGCTGGGCGTCTGGCTTCTCACGCGGTTAGCGTACCAGCTTGGTCGGTGGACTGTCCAACGCCACATC
GCGGCCTCTATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATTGACATTGCTATCGCTCTC
GAGGCGATCTTGGTTGGGGTGCTCCTGGGTGCCAACATTGTTCTTCTACTCGTGTCTGCCCATGGCTGGGCCGAC
GTCCAGCAACGCGCGGTGAAGCTCGCTGTTTTGAACCTATTGGCGCTCGGTACGGGCCTCACCTTTGGCCTCCCA
GCCTATCTGCTCGGAATCAGCTACTCTGCCGTTGCGTGGTCGCATTGTTGGGTTGGGCGGGTGATGGCCGCCCAT
TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTGAGGCATGACTGGGTGCCT
TTACTGGCAGCTGCTGCTGTTCTTCTCATGATCCCCGTGACCTTGCATGCGGTCGTCCGACAGCACTGTCAGGTG
GCCATGAAAATCCACTATTCTCTGGCGGTCACGGCAATGGTGGCCCTGGCATATCATACGTGGGACCAAGGATCA
GAATCCTGCTGGCAAGTGGTTGATGTTGGGATTCTATGGATTATGCTGAGTGCCGTCGCCGTCTCCTATGCAGTT
TTTATTTAA
Transcript >Ani_SJS72_1|g10940.t1
ATGCCTCCAGCACTCTCAGACCTGTATGAACAGGCTACCCAAACCCAGCCCGTTGACTGGTACGGGATATGGGTT
GCTGCTTTGCTGGGCGTCTGGCTTCTCACGCGGTTAGCGTACCAGCTTGGTCGGTGGACTGTCCAACGCCACATC
GCGGCCTCTATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATTGACATTGCTATCGCTCTC
GAGGCGATCTTGGTTGGGGTGCTCCTGGGTGCCAACATTGTTCTTCTACTCGTGTCTGCCCATGGCTGGGCCGAC
GTCCAGCAACGCGCGGTGAAGCTCGCTGTTTTGAACCTATTGGCGCTCGGTACGGGCCTCACCTTTGGCCTCCCA
GCCTATCTGCTCGGAATCAGCTACTCTGCCGTTGCGTGGTCGCATTGTTGGGTTGGGCGGGTGATGGCCGCCCAT
TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTGAGGCATGACTGGGTGCCT
TTACTGGCAGCTGCTGCTGTTCTTCTCATGATCCCCGTGACCTTGCATGCGGTCGTCCGACAGCACTGTCAGGTG
GCCATGAAAATCCACTATTCTCTGGCGGTCACGGCAATGGTGGCCCTGGCATATCATACGTGGGACCAAGGATCA
GAATCCTGCTGGCAAGTGGTTGATGTTGGGATTCTATGGATTATGCTGAGTGCCGTCGCCGTCTCCTATGCAGTT
TTTATTTAA
Gene >Ani_SJS72_1|g10940.t1
ATGCCTCCAGCACTCTCAGACCTGTATGAACAGGCTACCCAAACCCAGCCCGTTGACTGGTACGGGATATGGGTT
GCTGCTTTGCTGGGCGTCTGGCTTCTCACGCGGTTAGCGTACCAGCTTGGTCGGTGGACTGTCCAACGCCACATC
GCGGCCTCTATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATTGACATTGCTATCGCTCTC
GAGGCGATCTTGGTTGGGGTGCTCCTGGGTGCCAACATTGTTCTTCTACTCGTGTCTGCCCATGGCTGGGCCGAC
GTCCAGCAACGCGCGGTGAAGCTCGCTGTTTTGAACCTATTGGCGCTCGGTACGGGCCTCACCTTTGGCCTCCCA
GCCTATCTGCTCGGAATCAGCTACTCTGCCGTTGCGTGGTCGCATTGTTGGGTTGGGCGGGTGATGGCCGCCCAT
TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTGAGGCATGACTGGGTGCCT
TTACTGGTCAGTCCACCACGCTGCCCCTCGATGATGATGATGATGATGATGATGATGATGATGATGATAATTATT
ATTGTGATCCGAGAGCATACCACTAACTAGGGCTAGGCAGCTGCTGCTGTTCTTCTCATGATCCCCGTGACCTTG
CATGCGGTCGTCCGACAGCACTGTCAGGTGGCCATGAAAATCCACTATTCTCTGGCGGTCACGGCAATGGTGGCC
CTGGCATATCATACGTGGGACCAAGGATCAGAATCCTGCTGGCAAGTGGTTGATGTTGGGATTCTATGGATTATG
CTGAGTGCCGTCGCCGTCTCCTATGCAGTTTTTATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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