© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10938.t1 |
| Gene name | |
| Location | scaffold_169:25747..26789 |
| Strand | + |
| Gene length (bp) | 1042 |
| Transcript length (bp) | 873 |
| Coding sequence length (bp) | 873 |
| Protein length (aa) | 291 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 70 | 87 | 17 |
| 4 | 108 | 130 | 22 |
| 5 | 150 | 169 | 19 |
| 6 | 182 | 204 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10938.t1 MPSAGQRPTDPDILVVEAWGQGFLVGSLIVMIAITAANMKKGVLLHRLIVAELALALGHGTFIFLHAPAYGWYLS VTAVGLTISHSLHNVIAWMKIRGFFPPWGTRLYLITLLAAQPYWVVEIYANFAFFNRGQALYTTTRPLEPLFRDP WWIFTTCFLLYIIQRGYGCSLMQLIRISPRFGVMLLFMVISVVFAMVDMCAIRVENRLGYPPGMEPFWKLAFVFK CLSDTIILDDFRSALNRLRYHYHPDAPPPQETTHARGRSTNRLVDCVPEASIKRPDPVCRPPDMV* |
| Coding | >Ani_SJS72_1|g10938.t1 ATGCCAAGTGCTGGCCAGCGTCCTACAGACCCGGACATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGCACAGACTCATCGTG GCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCGTATGGCTGGTATCTCTCG GTCACGGCCGTGGGTCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATCCGCGGCTTTTTC CCACCCTGGGGCACGCGGCTCTATTTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTATGCC AATTTTGCCTTTTTCAACCGGGGCCAGGCCTTGTACACCACCACTCGGCCACTCGAGCCGCTTTTCCGGGACCCT TGGTGGATCTTCACCACCTGCTTTCTCCTGTACATCATCCAGCGTGGGTATGGGTGTTCGCTGATGCAGCTGATC CGCATCAGCCCACGGTTCGGCGTCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCAATGGTGGACATGTGT GCGATCCGGGTCGAGAATCGCCTAGGTTATCCTCCGGGCATGGAGCCGTTCTGGAAGTTAGCGTTTGTTTTCAAG TGCCTAAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGAACCGACTGCGCTATCACTATCACCCGGAC GCGCCCCCACCGCAGGAGACCACGCACGCTCGCGGTCGGAGCACAAACCGGCTTGTGGACTGTGTGCCCGAGGCA TCTATCAAACGCCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAA |
| Transcript | >Ani_SJS72_1|g10938.t1 ATGCCAAGTGCTGGCCAGCGTCCTACAGACCCGGACATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGCACAGACTCATCGTG GCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCGTATGGCTGGTATCTCTCG GTCACGGCCGTGGGTCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATCCGCGGCTTTTTC CCACCCTGGGGCACGCGGCTCTATTTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTATGCC AATTTTGCCTTTTTCAACCGGGGCCAGGCCTTGTACACCACCACTCGGCCACTCGAGCCGCTTTTCCGGGACCCT TGGTGGATCTTCACCACCTGCTTTCTCCTGTACATCATCCAGCGTGGGTATGGGTGTTCGCTGATGCAGCTGATC CGCATCAGCCCACGGTTCGGCGTCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCAATGGTGGACATGTGT GCGATCCGGGTCGAGAATCGCCTAGGTTATCCTCCGGGCATGGAGCCGTTCTGGAAGTTAGCGTTTGTTTTCAAG TGCCTAAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGAACCGACTGCGCTATCACTATCACCCGGAC GCGCCCCCACCGCAGGAGACCACGCACGCTCGCGGTCGGAGCACAAACCGGCTTGTGGACTGTGTGCCCGAGGCA TCTATCAAACGCCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAA |
| Gene | >Ani_SJS72_1|g10938.t1 ATGCCAAGTGCTGGCCAGCGTCCTACAGACCCGGACATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGCACAGACTCATCGTG GCAGAGGTAAGTTGTGCTGTGTCTTTGGGGCGAAAGGGACGCTATCCCCTGCTGACGTGGACGCTTAGCTCGCCC TGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCGTATGGCTGGTATCTCTCGGTCACGGCCGTGG GTCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATCCGCGGCTTTTTCCCACCCTGGGGCA CGCGGCTCTATTTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTATGCCAATTTTGCCTTTT TCAACCGGGGCCAGGCCTTGTACACCACCACTCGGCCACTCGAGCCGCTTTTCCGGTGCGGTGTTCGAGCGCAAT TCTTTCCACGCCCGGCGTTGCTAATCCGAATATAGGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTAC ATCATCCAGCGTGGGTATGGGTGTTCGCTGATGCAGCTGATCCGCATCAGCCCACGGTTCGGCGTCATGCTCCTG TTCATGGTGATCTCCGTCGTGTTTGCAATGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGTTATCCT CCGGGCATGGAGCCGTTCTGGAAGGTAAACAGCCGCCACTGACGAGAAAAAGATCAGCATGCTGACCCTGCTGTA GTTAGCGTTTGTTTTCAAGTGCCTAAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGAACCGACTGCG CTATCACTATCACCCGGACGCGCCCCCACCGCAGGAGACCACGCACGCTCGCGGTCGGAGCACAAACCGGCTTGT GGACTGTGTGCCCGAGGCATCTATCAAACGCCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAA |