© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10897.t1 |
| Gene name | |
| Location | scaffold_166:14446..15616 |
| Strand | - |
| Gene length (bp) | 1170 |
| Transcript length (bp) | 1170 |
| Coding sequence length (bp) | 1170 |
| Protein length (aa) | 390 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01048 | PNP_UDP_1 | Phosphorylase superfamily | 1.9E-07 | 19 | 116 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009116 | nucleoside metabolic process | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:1901657 | glycosyl compound metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 219 | 241 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10897.t1 MPQSTETNQNLPPLHTYTIAYITALPKEQTAVLATLDTIHHQHIPTPASDKNTYTLGSISPHNIVLICLPTMGTT AAASAVTSLLHMFPSIRFVLLVGVAGGIPSNGVRLGDVVVSVPVSGGYGGMVGWDRGMLVGDGRVVVQNGGGVGR RSEVGVGPAVKSVIDGLKHDGDNLIKMRIKECLDDVEERFPRLVPRWTRCDGLRDPLLGRWWVFSDSCLCLVGWV LWKVVVAGVIGLLGLWRLRMVEFGFGREMWKEKVMRTEKKERNVRVHYGLIASGNFVVKDAKARDALGKEFEEDI LCVEMEAAGVVDLVPCIVVRGICDYADSQKNKDWQEYAAMVAAAYARILLESLSPGDGDMIADAQDILGDNHEVG YPNDPVVLDLGIRL* |
| Coding | >Ani_SJS72_1|g10897.t1 ATGCCCCAGTCCACAGAAACAAATCAGAACCTTCCACCCCTCCACACCTACACCATCGCCTACATCACCGCCCTC CCCAAAGAACAAACCGCCGTCCTCGCCACCCTCGACACCATCCACCACCAGCACATCCCTACTCCCGCAAGCGAC AAAAACACCTACACCCTCGGCTCCATATCACCGCACAACATCGTCTTAATCTGCCTCCCCACCATGGGAACAACC GCCGCCGCAAGCGCAGTGACATCTCTTCTTCACATGTTCCCGTCCATCAGGTTCGTTCTGCTCGTTGGCGTGGCG GGCGGTATTCCGAGCAATGGAGTACGATTGGGTGATGTGGTTGTTAGTGTGCCGGTTAGTGGTGGGTATGGGGGT ATGGTGGGGTGGGATAGGGGGATGCTGGTTGGGGATGGGAGGGTTGTTGTTCAGAATGGAGGTGGGGTTGGTAGG AGGTCAGAGGTGGGTGTGGGACCGGCTGTGAAGAGTGTGATTGATGGGTTAAAGCATGACGGCGATAACTTGATT AAAATGAGAATCAAAGAGTGTCTGGATGATGTGGAGGAGAGGTTTCCACGATTAGTACCGAGGTGGACGCGGTGT GATGGGCTGAGGGATCCGCTGTTGGGACGGTGGTGGGTGTTTTCAGATTCATGTTTATGCTTGGTGGGGTGGGTA TTGTGGAAGGTGGTTGTTGCGGGTGTTATAGGGTTGCTTGGGTTATGGCGTTTGCGAATGGTGGAGTTCGGGTTT GGACGGGAGATGTGGAAGGAGAAGGTTATGAGAACAGAGAAGAAAGAACGGAACGTCCGAGTTCATTACGGTCTT ATTGCCTCTGGGAATTTTGTTGTCAAGGATGCTAAGGCTCGCGATGCTCTTGGCAAGGAGTTTGAGGAAGATATA CTCTGTGTCGAGATGGAGGCAGCTGGGGTAGTGGATCTGGTTCCGTGTATTGTTGTCAGAGGCATCTGTGATTAT GCGGACTCGCAGAAGAATAAGGATTGGCAGGAGTATGCTGCTATGGTTGCTGCGGCGTATGCGAGGATTCTTTTG GAATCTTTGTCGCCTGGGGATGGGGATATGATTGCTGATGCGCAGGATATACTTGGGGATAATCATGAGGTGGGA TACCCTAATGATCCAGTTGTGCTGGACTTGGGTATTCGACTATAA |
| Transcript | >Ani_SJS72_1|g10897.t1 ATGCCCCAGTCCACAGAAACAAATCAGAACCTTCCACCCCTCCACACCTACACCATCGCCTACATCACCGCCCTC CCCAAAGAACAAACCGCCGTCCTCGCCACCCTCGACACCATCCACCACCAGCACATCCCTACTCCCGCAAGCGAC AAAAACACCTACACCCTCGGCTCCATATCACCGCACAACATCGTCTTAATCTGCCTCCCCACCATGGGAACAACC GCCGCCGCAAGCGCAGTGACATCTCTTCTTCACATGTTCCCGTCCATCAGGTTCGTTCTGCTCGTTGGCGTGGCG GGCGGTATTCCGAGCAATGGAGTACGATTGGGTGATGTGGTTGTTAGTGTGCCGGTTAGTGGTGGGTATGGGGGT ATGGTGGGGTGGGATAGGGGGATGCTGGTTGGGGATGGGAGGGTTGTTGTTCAGAATGGAGGTGGGGTTGGTAGG AGGTCAGAGGTGGGTGTGGGACCGGCTGTGAAGAGTGTGATTGATGGGTTAAAGCATGACGGCGATAACTTGATT AAAATGAGAATCAAAGAGTGTCTGGATGATGTGGAGGAGAGGTTTCCACGATTAGTACCGAGGTGGACGCGGTGT GATGGGCTGAGGGATCCGCTGTTGGGACGGTGGTGGGTGTTTTCAGATTCATGTTTATGCTTGGTGGGGTGGGTA TTGTGGAAGGTGGTTGTTGCGGGTGTTATAGGGTTGCTTGGGTTATGGCGTTTGCGAATGGTGGAGTTCGGGTTT GGACGGGAGATGTGGAAGGAGAAGGTTATGAGAACAGAGAAGAAAGAACGGAACGTCCGAGTTCATTACGGTCTT ATTGCCTCTGGGAATTTTGTTGTCAAGGATGCTAAGGCTCGCGATGCTCTTGGCAAGGAGTTTGAGGAAGATATA CTCTGTGTCGAGATGGAGGCAGCTGGGGTAGTGGATCTGGTTCCGTGTATTGTTGTCAGAGGCATCTGTGATTAT GCGGACTCGCAGAAGAATAAGGATTGGCAGGAGTATGCTGCTATGGTTGCTGCGGCGTATGCGAGGATTCTTTTG GAATCTTTGTCGCCTGGGGATGGGGATATGATTGCTGATGCGCAGGATATACTTGGGGATAATCATGAGGTGGGA TACCCTAATGATCCAGTTGTGCTGGACTTGGGTATTCGACTATAA |
| Gene | >Ani_SJS72_1|g10897.t1 ATGCCCCAGTCCACAGAAACAAATCAGAACCTTCCACCCCTCCACACCTACACCATCGCCTACATCACCGCCCTC CCCAAAGAACAAACCGCCGTCCTCGCCACCCTCGACACCATCCACCACCAGCACATCCCTACTCCCGCAAGCGAC AAAAACACCTACACCCTCGGCTCCATATCACCGCACAACATCGTCTTAATCTGCCTCCCCACCATGGGAACAACC GCCGCCGCAAGCGCAGTGACATCTCTTCTTCACATGTTCCCGTCCATCAGGTTCGTTCTGCTCGTTGGCGTGGCG GGCGGTATTCCGAGCAATGGAGTACGATTGGGTGATGTGGTTGTTAGTGTGCCGGTTAGTGGTGGGTATGGGGGT ATGGTGGGGTGGGATAGGGGGATGCTGGTTGGGGATGGGAGGGTTGTTGTTCAGAATGGAGGTGGGGTTGGTAGG AGGTCAGAGGTGGGTGTGGGACCGGCTGTGAAGAGTGTGATTGATGGGTTAAAGCATGACGGCGATAACTTGATT AAAATGAGAATCAAAGAGTGTCTGGATGATGTGGAGGAGAGGTTTCCACGATTAGTACCGAGGTGGACGCGGTGT GATGGGCTGAGGGATCCGCTGTTGGGACGGTGGTGGGTGTTTTCAGATTCATGTTTATGCTTGGTGGGGTGGGTA TTGTGGAAGGTGGTTGTTGCGGGTGTTATAGGGTTGCTTGGGTTATGGCGTTTGCGAATGGTGGAGTTCGGGTTT GGACGGGAGATGTGGAAGGAGAAGGTTATGAGAACAGAGAAGAAAGAACGGAACGTCCGAGTTCATTACGGTCTT ATTGCCTCTGGGAATTTTGTTGTCAAGGATGCTAAGGCTCGCGATGCTCTTGGCAAGGAGTTTGAGGAAGATATA CTCTGTGTCGAGATGGAGGCAGCTGGGGTAGTGGATCTGGTTCCGTGTATTGTTGTCAGAGGCATCTGTGATTAT GCGGACTCGCAGAAGAATAAGGATTGGCAGGAGTATGCTGCTATGGTTGCTGCGGCGTATGCGAGGATTCTTTTG GAATCTTTGTCGCCTGGGGATGGGGATATGATTGCTGATGCGCAGGATATACTTGGGGATAATCATGAGGTGGGA TACCCTAATGATCCAGTTGTGCTGGACTTGGGTATTCGACTATAA |