© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10840.t1 |
| Gene name | |
| Location | scaffold_162:22825..24765 |
| Strand | + |
| Gene length (bp) | 1940 |
| Transcript length (bp) | 1680 |
| Coding sequence length (bp) | 1680 |
| Protein length (aa) | 560 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 3.2E-100 | 36 | 489 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 47 | 69 | 22 |
| 2 | 74 | 96 | 22 |
| 3 | 134 | 156 | 22 |
| 4 | 171 | 193 | 22 |
| 5 | 200 | 222 | 22 |
| 6 | 242 | 264 | 22 |
| 7 | 277 | 299 | 22 |
| 8 | 333 | 355 | 22 |
| 9 | 375 | 397 | 22 |
| 10 | 401 | 423 | 22 |
| 11 | 444 | 466 | 22 |
| 12 | 481 | 503 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10840.t1 MSSMLEGIHERLLVKSVDQNGNIRPVGVLDNDSIRPTPTRDRKWTRLTYFFFWFSATANVSNLYASSTGVSMGLT MWEAIACSFAGQFLAGCLMALNGRAGAVYRIPFPVLCRSSFGPWGAFWPTFNRAAMSIVWNGVNVTQGAQCLYVF LHAIFPSIARIPDKMGPKSALSSAQMICFLVYWLINCAFLVVPVPKMKKLIYIKVVVYYGGAFAMLAWVVRQAGG NPPALHEASAIHGRAKSWLICKFLFLGLASCGTFISNAADLQRYARKPNDVILAQLISFPLSGLLVAVIGNIIAG CSRSIFGELIWNPLTFLDKLMEGERYTPGNRAACAFISLAFVYSTVFSAIFENSIPAGNDIAALLPRYITVKRGF FICAILSYAICPWYLLATAAVFINFLSSYQIFLSAIAGVLICDYYLIRRGWLDIPALYTSRTDGVYYFFHGFNLR GFGAYLVAVAPNFYGFLHEMGVKAPLGIQRFYFVAYPVGLLIAFGVYYLACLAWPPAKMEKTSGWKEPKEYWDEF DPDRMDGVEAVTVLPVAVKDENGAKTALDIPCKV* |
| Coding | >Ani_SJS72_1|g10840.t1 ATGAGTTCCATGTTGGAAGGGATCCATGAGCGCTTGCTTGTGAAAAGTGTGGACCAGAATGGTAACATCCGACCT GTGGGAGTTCTTGATAATGATTCGATCCGACCAACACCAACTAGAGACCGGAAGTGGACGCGTCTAACGTACTTC TTCTTCTGGTTCTCTGCCACTGCCAATGTGAGCAACTTGTACGCTTCAAGCACGGGCGTATCCATGGGATTGACT ATGTGGGAGGCCATTGCCTGCTCGTTTGCCGGCCAGTTCCTCGCAGGGTGCCTGATGGCACTCAATGGGCGTGCT GGTGCTGTGTACCGAATCCCATTCCCAGTCTTGTGTCGATCTAGCTTTGGTCCTTGGGGAGCCTTCTGGCCAACT TTTAATCGAGCGGCAATGAGTATAGTCTGGAACGGCGTCAATGTTACGCAAGGAGCTCAGTGTCTATATGTTTTC CTGCATGCGATCTTCCCATCAATTGCTCGCATCCCCGACAAGATGGGGCCAAAGTCAGCGTTGTCCTCTGCCCAG ATGATATGCTTTCTCGTCTACTGGCTTATCAACTGCGCATTCCTTGTGGTTCCTGTGCCGAAAATGAAGAAGCTA ATCTATATCAAAGTAGTTGTCTACTATGGTGGCGCTTTTGCGATGTTAGCCTGGGTAGTACGCCAGGCTGGAGGT AACCCTCCCGCCCTGCACGAAGCTTCGGCCATCCATGGAAGGGCCAAGAGCTGGCTTATATGCAAGTTTCTGTTC CTGGGACTGGCCAGCTGCGGGACCTTCATTTCCAATGCCGCGGACCTTCAGCGATACGCAAGGAAGCCTAACGAC GTAATCCTAGCACAGCTCATCAGCTTTCCGCTCTCTGGGTTGTTAGTGGCCGTCATCGGCAATATCATTGCTGGG TGTAGCAGAAGTATATTTGGGGAGCTGATATGGAATCCCCTGACCTTCTTGGACAAACTGATGGAGGGAGAAAGA TACACGCCGGGAAACCGGGCTGCTTGTGCGTTCATTTCATTGGCATTTGTGTACTCAACTGTCTTTTCCGCTATT TTCGAGAACTCGATTCCTGCTGGAAATGACATTGCAGCTTTACTGCCTCGCTACATAACCGTTAAGCGTGGCTTC TTCATTTGTGCTATTCTCTCCTACGCTATCTGTCCATGGTACCTCCTTGCCACAGCGGCCGTATTCATCAACTTT CTCTCTTCCTATCAAATATTTCTCTCTGCTATAGCTGGAGTTCTGATATGCGACTACTACCTGATTCGAAGAGGA TGGCTCGACATTCCGGCTTTATATACATCGCGCACCGATGGCGTGTACTATTTCTTTCACGGATTCAATTTACGC GGATTCGGTGCCTATCTTGTAGCAGTTGCGCCGAACTTCTATGGTTTTTTGCACGAGATGGGCGTCAAGGCACCT TTGGGAATACAGCGGTTTTACTTTGTCGCGTACCCTGTCGGCCTTCTCATTGCATTCGGGGTGTATTATCTCGCA TGTCTGGCGTGGCCTCCCGCCAAAATGGAAAAGACAAGCGGGTGGAAGGAGCCCAAGGAGTACTGGGACGAATTC GATCCTGATCGAATGGACGGGGTTGAGGCGGTGACCGTGCTACCCGTGGCCGTCAAAGATGAGAATGGTGCGAAG ACTGCGTTAGACATTCCATGCAAAGTTTGA |
| Transcript | >Ani_SJS72_1|g10840.t1 ATGAGTTCCATGTTGGAAGGGATCCATGAGCGCTTGCTTGTGAAAAGTGTGGACCAGAATGGTAACATCCGACCT GTGGGAGTTCTTGATAATGATTCGATCCGACCAACACCAACTAGAGACCGGAAGTGGACGCGTCTAACGTACTTC TTCTTCTGGTTCTCTGCCACTGCCAATGTGAGCAACTTGTACGCTTCAAGCACGGGCGTATCCATGGGATTGACT ATGTGGGAGGCCATTGCCTGCTCGTTTGCCGGCCAGTTCCTCGCAGGGTGCCTGATGGCACTCAATGGGCGTGCT GGTGCTGTGTACCGAATCCCATTCCCAGTCTTGTGTCGATCTAGCTTTGGTCCTTGGGGAGCCTTCTGGCCAACT TTTAATCGAGCGGCAATGAGTATAGTCTGGAACGGCGTCAATGTTACGCAAGGAGCTCAGTGTCTATATGTTTTC CTGCATGCGATCTTCCCATCAATTGCTCGCATCCCCGACAAGATGGGGCCAAAGTCAGCGTTGTCCTCTGCCCAG ATGATATGCTTTCTCGTCTACTGGCTTATCAACTGCGCATTCCTTGTGGTTCCTGTGCCGAAAATGAAGAAGCTA ATCTATATCAAAGTAGTTGTCTACTATGGTGGCGCTTTTGCGATGTTAGCCTGGGTAGTACGCCAGGCTGGAGGT AACCCTCCCGCCCTGCACGAAGCTTCGGCCATCCATGGAAGGGCCAAGAGCTGGCTTATATGCAAGTTTCTGTTC CTGGGACTGGCCAGCTGCGGGACCTTCATTTCCAATGCCGCGGACCTTCAGCGATACGCAAGGAAGCCTAACGAC GTAATCCTAGCACAGCTCATCAGCTTTCCGCTCTCTGGGTTGTTAGTGGCCGTCATCGGCAATATCATTGCTGGG TGTAGCAGAAGTATATTTGGGGAGCTGATATGGAATCCCCTGACCTTCTTGGACAAACTGATGGAGGGAGAAAGA TACACGCCGGGAAACCGGGCTGCTTGTGCGTTCATTTCATTGGCATTTGTGTACTCAACTGTCTTTTCCGCTATT TTCGAGAACTCGATTCCTGCTGGAAATGACATTGCAGCTTTACTGCCTCGCTACATAACCGTTAAGCGTGGCTTC TTCATTTGTGCTATTCTCTCCTACGCTATCTGTCCATGGTACCTCCTTGCCACAGCGGCCGTATTCATCAACTTT CTCTCTTCCTATCAAATATTTCTCTCTGCTATAGCTGGAGTTCTGATATGCGACTACTACCTGATTCGAAGAGGA TGGCTCGACATTCCGGCTTTATATACATCGCGCACCGATGGCGTGTACTATTTCTTTCACGGATTCAATTTACGC GGATTCGGTGCCTATCTTGTAGCAGTTGCGCCGAACTTCTATGGTTTTTTGCACGAGATGGGCGTCAAGGCACCT TTGGGAATACAGCGGTTTTACTTTGTCGCGTACCCTGTCGGCCTTCTCATTGCATTCGGGGTGTATTATCTCGCA TGTCTGGCGTGGCCTCCCGCCAAAATGGAAAAGACAAGCGGGTGGAAGGAGCCCAAGGAGTACTGGGACGAATTC GATCCTGATCGAATGGACGGGGTTGAGGCGGTGACCGTGCTACCCGTGGCCGTCAAAGATGAGAATGGTGCGAAG ACTGCGTTAGACATTCCATGCAAAGTTTGA |
| Gene | >Ani_SJS72_1|g10840.t1 ATGAGTTCCATGTTGGAAGGGATCCATGAGCGCTTGCTTGTGAAAAGTGTGGACCAGAATGGTAACATCCGACCT GTGGGAGTTCTTGATAATGATTCGATCCGACCAACACCAACTAGAGACCGGAAGTGGACGCGTCTAACGTACTTC TTCTTCTGGTTCTCTGCCACTGCCAATGTGAGCAACTTGTACGCTTCAAGCACGGGCGTATCCATGGGATTGACT ATGTGGGAGGCCATTGCCTGCTCGTTTGCCGGCCAGTTCCTCGCAGGGTGCCTGATGGCACTCAATGGGCGTGCT GGTGCTGTGTACCGAATCCCATTCCCAGTCTTGTGTCGATCTAGCTTTGGTCCTTGGGGAGCCTTCTGGCCAACT TTTAATCGAGCGGCAATGAGTATAGTCTGGAACGGCGTCAATGTTACGCAAGGAGCTCAGTGTCTATAGTAAGTA TTACGACTTTTTCCAATGCACATGACTGACATTGACCCAGTGTTTTCCTGCATGCGATCTTCCCATCAATTGCTC GCATCCCCGACAAGATGGGGCCAAAGTCAGCGTTGTCCTCTGCCCAGATGATATGCTTTCTCGTCTACTGGTAAG TGCCGAGTCCACTCGAGAGCTATGGGACGCTAATAGGTTACAGGCTTATCAACTGCGCATTCCTTGTGGTTCCTG TGCCGAAAATGAAGAAGCTAATCTATATCAAAGTAGTTGTCTACTATGGTGGCGCTTTTGCGATGTTAGCCTGGG TAGTACGCCAGGCTGGAGGTAACCCTCCCGCCCTGCACGAAGCTTCGGCCATCCATGGAAGGGCCAAGAGCTGGC TTATATGCAAGTTTCTGTTCCTGGGACTGGCCAGCTGCGGGACCTTCATTTCCAATGCCGCGGACCTTCAGCGAT ACGCAAGGAAGCCTAACGACGTAATCCTAGCACAGCTCATCAGCTTTCCGCTCTCTGGGTTGTTAGTGGCCGTCA TCGGCAATATCATTGCTGGGTGTAGCAGAAGTATATTTGGGGAGGTACGTGTCACAATTCCTAATGCCTCTGCAT ATAGGCCATATACTAAGGAAAGCAGCTGATATGGAATCCCCTGACCTTCTTGGACAAACTGATGGAGGGAGAAAG ATACACGCCGGGAAACCGGGCTGCTTGTGCGTTCATTTCATTGGCATTTGTGTACTCAACTGTCTTTTCCGCTAT TTTCGAGAACTCGATTCCGTAAGTATCCTGGAGCTCTGATGCAGTATCTTTGACTGATTATTCTTGCTATTATGC AGTGCTGGAAATGACATTGCAGCTTTACTGCCTCGCTACATAACCGTTAAGCGTGGCTTCTTCATTTGTGCTAGT GAGTATCGACCCATTAAGTCAAGTCTTGCGGTCACTAATATCATCTAGTTCTCTCCTACGCTATCTGTCCATGGT ACCTCCTTGCCACAGCGGCCGTATTCATCAACTTTCTCTCTTCCTATCAAATATTTCTCTCTGCTATAGCTGGAG TTCTGATATGCGACTACTACCTGATTCGAAGAGGATGGCTCGACATTCCGGCTTTATATACATCGCGCACCGATG GCGTGTACTATTTCTTTCACGGATTCAATTTACGCGGATTCGGTGCCTATCTTGTAGCAGTTGCGCCGAACTTCT ATGGTTTTTTGCACGAGATGGGCGTCAAGGCACCTTTGGGAATACAGCGGTTTTACTTTGTCGCGTACCCTGTCG GCCTTCTCATTGCATTCGGGGTGTATTATCTCGCATGTCTGGCGTGGCCTCCCGCCAAAATGGAAAAGACAAGCG GGTGGAAGGAGCCCAAGGAGTACTGGGACGAATTCGATCCTGATCGAATGGACGGGGTTGAGGCGGTGACCGTGC TACCCGTGGCCGTCAAAGATGAGAATGGTGCGAAGACTGCGTTAGACATTCCATGCAAAGTTTGA |