© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g10830.t1 |
| Gene name | |
| Location | scaffold_162:802..2357 |
| Strand | - |
| Gene length (bp) | 1555 |
| Transcript length (bp) | 1302 |
| Coding sequence length (bp) | 1302 |
| Protein length (aa) | 434 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.4E-16 | 45 | 304 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.3E-09 | 272 | 429 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 43 | 62 | 19 |
| 2 | 69 | 91 | 22 |
| 3 | 101 | 123 | 22 |
| 4 | 130 | 152 | 22 |
| 5 | 162 | 184 | 22 |
| 6 | 191 | 213 | 22 |
| 7 | 246 | 268 | 22 |
| 8 | 281 | 303 | 22 |
| 9 | 313 | 332 | 19 |
| 10 | 339 | 358 | 19 |
| 11 | 373 | 395 | 22 |
| 12 | 402 | 424 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10830.t1 MSTVDSPLLGHRPQHQPQADVEHPLYHGKRREVSGSIIIKVLAVFWTFLIMGAVDAAYGPLIPYLEKYYNISHAT VSLLFLSPVCGYTLAALLNSEIHVRVGRRGIAFISAICHFLTFSIVALHPRYPIVVVSFALSGFGTGLADSGWNA WISSLPRSNELLGMLHGLYGLGAVLSPLIVSGLVTRAKVPWFYFYTIMAACATLEVVVCTIAFWGDGPITREEGD NHHESEHGSLKHALFQQPYARVTWICALFLLIYVGIEVALGGWTVVFMMQVRHGSPFASGMAVTGFWLGITCGRI FLGFVTPLIGEEPAVTTYSVLAIISGFIYWLVPNFNVSAVAVSLQGFFLGPLFPVLIAVATKLLPQSLHVSSIGF ASAIGGAGAALMPSAIGAVAEAKGVQILQPFILGLSGVALVLWMSLWWISKESSRTSS* |
| Coding | >Ani_SJS72_1|g10830.t1 ATGTCCACGGTCGACAGCCCCTTGCTAGGGCACAGGCCTCAGCACCAGCCTCAAGCGGATGTTGAGCATCCACTG TACCACGGTAAACGACGGGAGGTTTCCGGCTCTATTATTATCAAGGTTCTAGCTGTCTTCTGGACGTTCTTGATC ATGGGAGCGGTCGATGCAGCATATGGGCCTTTGATTCCGTACCTTGAAAAATACTACAACATCTCCCACGCCACC GTTTCGCTTTTATTCCTATCCCCCGTTTGTGGCTACACGCTTGCCGCACTGCTGAACAGCGAAATCCACGTTCGG GTGGGCCGTCGTGGCATCGCTTTCATTTCAGCGATCTGCCACTTTCTAACGTTTAGCATCGTTGCCCTGCATCCT CGATACCCTATTGTTGTGGTGTCTTTTGCGCTGTCTGGGTTCGGAACCGGGCTGGCAGACTCGGGATGGAACGCT TGGATAAGCAGCCTGCCTCGCTCGAACGAACTACTGGGGATGCTGCATGGCTTGTATGGACTGGGAGCTGTGCTA AGCCCATTGATTGTGTCTGGACTGGTAACTAGGGCTAAAGTTCCATGGTTTTACTTTTACACTATCATGGCTGCG TGCGCTACTCTTGAAGTAGTTGTCTGCACAATCGCCTTTTGGGGTGATGGACCGATTACCCGAGAGGAGGGGGAT AATCACCATGAGAGTGAACATGGTAGCCTGAAACATGCTCTTTTCCAACAGCCATATGCTCGGGTGACTTGGATC TGCGCTCTCTTCCTGCTTATTTACGTTGGGATTGAAGTCGCTTTGGGTGGATGGACGGTGGTTTTCATGATGCAG GTACGCCATGGTAGCCCTTTTGCCAGCGGCATGGCTGTTACGGGATTTTGGCTGGGCATCACCTGTGGCCGCATA TTTCTCGGATTCGTTACACCGCTGATAGGCGAAGAACCGGCAGTTACAACATATTCTGTGCTGGCGATAATCTCT GGCTTCATCTACTGGCTCGTTCCGAATTTCAACGTCTCGGCAGTTGCAGTATCGCTACAAGGCTTCTTCCTGGGT CCTCTGTTCCCGGTCCTCATCGCAGTGGCCACCAAGTTGCTTCCGCAATCCTTGCACGTGAGCTCTATTGGATTT GCCTCGGCCATTGGAGGGGCTGGAGCTGCATTGATGCCATCTGCAATCGGTGCAGTTGCAGAAGCGAAAGGAGTC CAGATTCTGCAGCCCTTCATTCTGGGGCTTTCAGGTGTGGCGCTGGTGTTGTGGATGTCTTTGTGGTGGATTTCG AAAGAGAGTTCAAGGACGTCGAGTTAG |
| Transcript | >Ani_SJS72_1|g10830.t1 ATGTCCACGGTCGACAGCCCCTTGCTAGGGCACAGGCCTCAGCACCAGCCTCAAGCGGATGTTGAGCATCCACTG TACCACGGTAAACGACGGGAGGTTTCCGGCTCTATTATTATCAAGGTTCTAGCTGTCTTCTGGACGTTCTTGATC ATGGGAGCGGTCGATGCAGCATATGGGCCTTTGATTCCGTACCTTGAAAAATACTACAACATCTCCCACGCCACC GTTTCGCTTTTATTCCTATCCCCCGTTTGTGGCTACACGCTTGCCGCACTGCTGAACAGCGAAATCCACGTTCGG GTGGGCCGTCGTGGCATCGCTTTCATTTCAGCGATCTGCCACTTTCTAACGTTTAGCATCGTTGCCCTGCATCCT CGATACCCTATTGTTGTGGTGTCTTTTGCGCTGTCTGGGTTCGGAACCGGGCTGGCAGACTCGGGATGGAACGCT TGGATAAGCAGCCTGCCTCGCTCGAACGAACTACTGGGGATGCTGCATGGCTTGTATGGACTGGGAGCTGTGCTA AGCCCATTGATTGTGTCTGGACTGGTAACTAGGGCTAAAGTTCCATGGTTTTACTTTTACACTATCATGGCTGCG TGCGCTACTCTTGAAGTAGTTGTCTGCACAATCGCCTTTTGGGGTGATGGACCGATTACCCGAGAGGAGGGGGAT AATCACCATGAGAGTGAACATGGTAGCCTGAAACATGCTCTTTTCCAACAGCCATATGCTCGGGTGACTTGGATC TGCGCTCTCTTCCTGCTTATTTACGTTGGGATTGAAGTCGCTTTGGGTGGATGGACGGTGGTTTTCATGATGCAG GTACGCCATGGTAGCCCTTTTGCCAGCGGCATGGCTGTTACGGGATTTTGGCTGGGCATCACCTGTGGCCGCATA TTTCTCGGATTCGTTACACCGCTGATAGGCGAAGAACCGGCAGTTACAACATATTCTGTGCTGGCGATAATCTCT GGCTTCATCTACTGGCTCGTTCCGAATTTCAACGTCTCGGCAGTTGCAGTATCGCTACAAGGCTTCTTCCTGGGT CCTCTGTTCCCGGTCCTCATCGCAGTGGCCACCAAGTTGCTTCCGCAATCCTTGCACGTGAGCTCTATTGGATTT GCCTCGGCCATTGGAGGGGCTGGAGCTGCATTGATGCCATCTGCAATCGGTGCAGTTGCAGAAGCGAAAGGAGTC CAGATTCTGCAGCCCTTCATTCTGGGGCTTTCAGGTGTGGCGCTGGTGTTGTGGATGTCTTTGTGGTGGATTTCG AAAGAGAGTTCAAGGACGTCGAGTTAG |
| Gene | >Ani_SJS72_1|g10830.t1 ATGTCCACGGTCGACAGCCCCTTGCTAGGGCACAGGCCTCAGCACCAGCCTCAAGCGGATGTTGAGCATCCACTG TACCACGGTAAACGACGGGAGGTTTCCGGCTCTATTATTATCAAGGTTCTAGCTGTCTTCTGGACGTTCTTGATC ATGGGAGCGGTCGATGCAGCATATGGGGTAAGGAACTGTAGAGAAGAACAGACCTGCCACTTTTGAAACTAACCC TCGACCAGCCTTTGATTCCGTACGTAAGTGCAATCTCACCATCTTGTTGTCGATAGGCTGTTGAGTATAAAAGCT TGAAAAATACTACAACATCTCCCACGCCACCGTTTCGCTTTTATTCCTATCCCCCGTTTGTGGCTACACGCTTGC CGCACTGCTGAACAGCGAAATCCACGTTCGGGTGGGCCGTCGTGGCATCGCTTTCATTTCAGCGATCTGCCACTT TCTAACGTTTAGCATCGTTGCCCTGCATCCTCGATACCCTATTGTTGTGGTGTCTTTTGCGCTGTCTGGGTTCGG AACCGGGCTGGCAGACTCGGGATGGAACGCTTGGATAAGCAGCCTGCCTCGCTCGAACGAACTACTGGGGATGCT GCATGGCTTGTATGGACTGGGAGCTGTGCTAAGCCCATTGATTGTGTCTGGACTGGTAACTAGGGCTAAAGTTCC ATGGTTTTACTTTTACACTATCATGGTACCGCTTCTCTGATGTCCATGCCCCCTCAGTTGCTCATGTATGACCTA GGCTGCGTGCGCTACTCTTGAAGTAGTTGTCTGCACAATCGCCTTTTGGGGTGATGGACCGATTACCCGAGAGGA GGGGGATAATCACCATGAGAGTGAACATGGTAGCCTGAAACATGCTCTTTTCCAACAGCCATATGCTCGGGTGAC TTGGATCTGCGCTCTCTTCCTGCTTATTTACGTTGGGATTGAAGTCGCTTTGGGTGGATGGACGGTGGTTTTCAT GATGCAGGTACGCCATGGTAGCCCTTTTGCCAGCGGCATGGCTGTTACGGGATTTTGGCTGGGCATCACCTGTGG CCGCATATTTCTCGGATTCGTTACACCGCTGATAGGCGAAGAACCGGCAGTTACAGTATGTCATTCCCCCCCTTT CAGATTGTTCCTTACTTTGACCCCTTCTGCGCAATGGTTAATTCCCCCTTAACAAACCGATGCTCAATATCCGCA GACATATTCTGTGCTGGCGATAATCTCTGGCTTCATCTACTGGCTCGTTCCGAATTTCAACGTCTCGGCAGTTGC AGTATCGCTACAAGGCTTCTTCCTGGGTCCTCTGTTCCCGGTCCTCATCGCAGTGGCCACCAAGTTGCTTCCGCA ATCCTTGCACGTGAGCTCTATTGGATTTGCCTCGGCCATTGGAGGGGCTGGAGCTGCATTGATGCCATCTGCAAT CGGTGCAGTTGCAGAAGCGAAAGGAGTCCAGATTCTGCAGCCCTTCATTCTGGGGCTTTCAGGTGTGGCGCTGGT GTTGTGGATGTCTTTGTGGTGGATTTCGAAAGAGAGTTCAAGGACGTCGAGTTAG |