© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10811.t1 |
| Gene name | |
| Location | scaffold_160:32150..34105 |
| Strand | - |
| Gene length (bp) | 1955 |
| Transcript length (bp) | 1692 |
| Coding sequence length (bp) | 1692 |
| Protein length (aa) | 564 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01061 | ABC2_membrane | ABC-2 type transporter | 2.5E-19 | 16 | 202 |
| PF00005 | ABC_tran | ABC transporter | 3.1E-15 | 297 | 405 |
| PF19055 | ABC2_membrane_7 | ABC-2 type transporter | 1.1E-05 | 434 | 498 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0140359 | ABC-type transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0000166 | nucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0015399 | primary active transmembrane transporter activity | No |
| GO:0043168 | anion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0005575 | cellular_component | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 11 | 30 | 19 |
| 2 | 45 | 67 | 22 |
| 3 | 123 | 145 | 22 |
| 4 | 150 | 172 | 22 |
| 5 | 184 | 206 | 22 |
| 6 | 247 | 269 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10811.t1 MVVCIRDIQSLIGIGCTIAVLAAILGWVFWHLDGSLAGIRSRQGSLWDATGLYGYLMLISEICRLLGDVKYFDHE RREQLVGPVIFILSRRAVKLILEDLSLPTLFTLIYYPMVGYRDSKSQVFFFWLMMFLTHINAVGFATVSVATTRN FYGAIFIGNMYFTLQTAASGYFLQANQIPLYVQWLKWLTTTFYTFSALCTLEYVGYNGSNPGYLYDCPYSHDVRD PQCKEYTGAFIMDSLWLPSGGIWKHVLVLCAFAIFYQGSAIAIFRVKTAGRLCWETRHIFEVIVGVPGIYYIEGS PISSQKLRGLVSYVPQDDYNLLPTLTVRETLYFATELRCSGSVPSHERKRRVEDMVKRFGLESCANTIVGSTSNK EINGGEKRRLSIACEVVTEPRVLVLDEPTSGLDSRTALSVLELLHQLSSDGCTVILSIHQPSSAMWALISACLLL SPDGRPVYAADASQMASYFDCLGYTCPHTASLADFVIDITAGSSSRELESLIDKWTHWQSSEMSTASETPTLWHL DPSGPQTKCRRFIPTTRVLLHRAYLNMLRSPILSVLTA* |
| Coding | >Ani_SJS72_1|g10811.t1 ATGGTGGTATGTATAAGAGATATCCAGTCGCTTATTGGAATCGGTTGTACGATTGCCGTGCTGGCTGCCATCCTT GGATGGGTATTTTGGCACTTGGATGGATCCCTTGCAGGAATCCGTTCCCGGCAAGGAAGCCTCTGGGATGCTACG GGTCTTTATGGGTATCTGATGTTGATCAGCGAGATCTGTCGATTGTTAGGAGATGTAAAATACTTTGACCACGAA CGGAGGGAACAGCTCGTTGGTCCCGTCATCTTCATTCTCAGTCGCCGAGCAGTGAAGCTAATACTGGAGGACCTC AGCTTGCCGACGTTGTTCACTCTCATATACTATCCCATGGTGGGCTACCGAGACAGCAAATCGCAAGTCTTCTTC TTCTGGTTAATGATGTTTCTTACGCATATCAATGCTGTTGGGTTTGCCACTGTATCTGTCGCCACGACTCGAAAC TTTTACGGAGCTATATTCATAGGGAATATGTACTTCACGTTGCAGACAGCGGCCTCGGGGTACTTTTTGCAGGCG AATCAGATACCGCTATATGTGCAGTGGCTGAAATGGTTAACGACAACGTTTTATACCTTCAGCGCCCTTTGTACC CTTGAATATGTTGGATACAATGGTTCCAATCCCGGGTATCTATACGATTGCCCCTATTCTCATGATGTGCGTGAT CCTCAATGCAAAGAGTACACGGGTGCCTTTATCATGGACAGCCTATGGCTTCCAAGTGGTGGGATCTGGAAACAT GTTCTAGTCTTGTGCGCATTTGCTATATTTTATCAAGGCTCTGCGATTGCGATATTCCGTGTTAAAACAGCTGGC CGACTTTGCTGGGAGACTCGCCACATCTTTGAGGTCATCGTGGGAGTCCCTGGGATCTATTACATTGAAGGCTCT CCAATAAGCAGCCAGAAACTCCGTGGTTTAGTATCATATGTTCCGCAGGATGACTATAATCTTCTTCCCACTCTG ACAGTTCGAGAAACATTGTACTTTGCTACTGAATTGAGATGTTCTGGGTCCGTCCCCTCACACGAGCGGAAAAGG CGGGTGGAGGACATGGTCAAGCGGTTTGGGTTAGAATCCTGCGCCAATACGATTGTGGGATCGACCTCCAATAAA GAAATCAACGGTGGTGAGAAGCGACGCCTGTCAATAGCCTGTGAAGTCGTAACAGAACCAAGAGTGCTGGTTCTT GACGAGCCAACCTCTGGCCTGGACTCGCGTACTGCTCTCTCCGTTCTTGAGCTGCTTCATCAACTATCGTCCGAT GGATGTACCGTCATCCTCTCCATTCATCAACCATCCTCCGCCATGTGGGCACTGATTTCGGCCTGTCTCCTTCTC AGCCCGGACGGCCGTCCCGTGTACGCGGCGGATGCGAGCCAGATGGCTTCCTACTTTGACTGTCTCGGATACACC TGTCCCCATACCGCAAGCCTGGCTGACTTCGTTATTGATATAACAGCTGGCTCTTCTTCTCGGGAATTAGAAAGC CTAATAGATAAGTGGACGCATTGGCAGTCATCAGAAATGTCGACAGCTTCAGAAACCCCTACCCTCTGGCATCTT GACCCCTCTGGCCCCCAAACCAAATGCCGCCGCTTCATTCCTACTACCCGCGTCCTCCTGCACCGCGCCTACCTC AACATGCTCCGCAGCCCTATATTATCTGTTTTGACAGCATAA |
| Transcript | >Ani_SJS72_1|g10811.t1 ATGGTGGTATGTATAAGAGATATCCAGTCGCTTATTGGAATCGGTTGTACGATTGCCGTGCTGGCTGCCATCCTT GGATGGGTATTTTGGCACTTGGATGGATCCCTTGCAGGAATCCGTTCCCGGCAAGGAAGCCTCTGGGATGCTACG GGTCTTTATGGGTATCTGATGTTGATCAGCGAGATCTGTCGATTGTTAGGAGATGTAAAATACTTTGACCACGAA CGGAGGGAACAGCTCGTTGGTCCCGTCATCTTCATTCTCAGTCGCCGAGCAGTGAAGCTAATACTGGAGGACCTC AGCTTGCCGACGTTGTTCACTCTCATATACTATCCCATGGTGGGCTACCGAGACAGCAAATCGCAAGTCTTCTTC TTCTGGTTAATGATGTTTCTTACGCATATCAATGCTGTTGGGTTTGCCACTGTATCTGTCGCCACGACTCGAAAC TTTTACGGAGCTATATTCATAGGGAATATGTACTTCACGTTGCAGACAGCGGCCTCGGGGTACTTTTTGCAGGCG AATCAGATACCGCTATATGTGCAGTGGCTGAAATGGTTAACGACAACGTTTTATACCTTCAGCGCCCTTTGTACC CTTGAATATGTTGGATACAATGGTTCCAATCCCGGGTATCTATACGATTGCCCCTATTCTCATGATGTGCGTGAT CCTCAATGCAAAGAGTACACGGGTGCCTTTATCATGGACAGCCTATGGCTTCCAAGTGGTGGGATCTGGAAACAT GTTCTAGTCTTGTGCGCATTTGCTATATTTTATCAAGGCTCTGCGATTGCGATATTCCGTGTTAAAACAGCTGGC CGACTTTGCTGGGAGACTCGCCACATCTTTGAGGTCATCGTGGGAGTCCCTGGGATCTATTACATTGAAGGCTCT CCAATAAGCAGCCAGAAACTCCGTGGTTTAGTATCATATGTTCCGCAGGATGACTATAATCTTCTTCCCACTCTG ACAGTTCGAGAAACATTGTACTTTGCTACTGAATTGAGATGTTCTGGGTCCGTCCCCTCACACGAGCGGAAAAGG CGGGTGGAGGACATGGTCAAGCGGTTTGGGTTAGAATCCTGCGCCAATACGATTGTGGGATCGACCTCCAATAAA GAAATCAACGGTGGTGAGAAGCGACGCCTGTCAATAGCCTGTGAAGTCGTAACAGAACCAAGAGTGCTGGTTCTT GACGAGCCAACCTCTGGCCTGGACTCGCGTACTGCTCTCTCCGTTCTTGAGCTGCTTCATCAACTATCGTCCGAT GGATGTACCGTCATCCTCTCCATTCATCAACCATCCTCCGCCATGTGGGCACTGATTTCGGCCTGTCTCCTTCTC AGCCCGGACGGCCGTCCCGTGTACGCGGCGGATGCGAGCCAGATGGCTTCCTACTTTGACTGTCTCGGATACACC TGTCCCCATACCGCAAGCCTGGCTGACTTCGTTATTGATATAACAGCTGGCTCTTCTTCTCGGGAATTAGAAAGC CTAATAGATAAGTGGACGCATTGGCAGTCATCAGAAATGTCGACAGCTTCAGAAACCCCTACCCTCTGGCATCTT GACCCCTCTGGCCCCCAAACCAAATGCCGCCGCTTCATTCCTACTACCCGCGTCCTCCTGCACCGCGCCTACCTC AACATGCTCCGCAGCCCTATATTATCTGTTTTGACAGCATAA |
| Gene | >Ani_SJS72_1|g10811.t1 ATGGTGGTATGTATAAGAGATATCCAGTCGCTTATTGGAATCGGTTGTACGATTGCCGTGCTGGCTGCCATCCTT GGATGGGTATTTTGGCACTTGGATGGATCCCTTGCAGGAATCCGTTCCCGGCAAGGAAGCCTCTGGGATGCTACG GGTCTTTATGGGTATCTGATGTTGATCAGCGAGATCTGTCGATTGTTAGGAGATGTAAAATACTTTGACCACGAA CGGAGGGAACAGCTCGTTGGTCCCGTCATCTTCATTCTCAGTCGCCGAGCAGTGAAGCTAATACTGGAGGACCTC AGCTTGCCGACGTTGTTCACTCTCATATACTATCCCATGGTGGGCTACCGAGACAGCAAATCGCAAGTCTTCTTC TTCTGGTTAATGATGTTTCTTACGCATATCAATGCTGTTGGGTTTGCCACTGTATCTGTCGCCACGACTCGAAAC TTTTACGGAGCTATATTCATAGGGAATATGTACTTCACGTTGCAGACAGCGGCCTCGGGGTACTTTTTGCAGGCG AATCAGATACCGCTATATGTGCAGTGGCTGAAATGGTTAACGACAACGTTTTATACCTTCAGCGCCCTTTGTACC CTTGAATATGTTGGATACAATGGTTCCAATCCCGGGTATCTATACGATTGCCCCTATTCTCATGATGTGCGTGAT CCTCAATGCAAAGAGTACACGGGTGCCTTTATCATGGACAGCCTATGGCTTCCAAGTGGTGGGATCTGGAAACAT GTTCTAGTCTTGTGCGCATTTGCTATATTTTATCAAGGCTCTGCGATTGCGATATTCCGTGTTAAAACAGCTGGC CGACTTTGGTACGTGGCAGGCGCAGAAAATAAGGGAAGCGAAGCATCTCCACGCGAGAAGCCATCTGTTCCTTAT CCAACTCAATCCCACCACAGCTATATACAATTTCATGAGCTAGAGCTCTACAAGACATATTCGCCGACATGGACA CGGCCTAGGCGAAGATCGGCTCGGATCATTGGTCCAGTATCACTCTTTTTTCGCTCCGGAAGACTGAATGTAATT ATGGGGGCTTCGGGAAGCGGCAAGACGACCTTACTGAATGCCCTAGCTGGGAGACTCGCCACATCTTTGAGGTCA TCGTGGGAGTCCCTGGGATCTATTACATTGAAGGCTCTCCAATAAGCAGCCAGAAACTCCGTGGTTTAGTATCAT ATGTTCCGCAGGATGACTATAATCTTCTTCCCACTCTGACAGTTCGAGAAACATTGTACTTTGCTACTGAATTGA GATGTTCTGGGTCCGTCCCCTCACACGAGCGGAAAAGGCGGGTGGAGGACATGGTCAAGCGGTTTGGGTTAGAAT CCTGCGCCAATACGATTGTGGGATCGACCTCCAATAAAGAAATCAACGGTGGTGAGAAGCGACGCCTGTCAATAG CCTGTGAAGTCGTAACAGAACCAAGAGTGCTGGTTCTTGACGAGCCAACCTCTGGCCTGGACTCGCGTACTGCTC TCTCCGTTCTTGAGCTGCTTCATCAACTATCGTCCGATGGATGTACCGTCATCCTCTCCATTCATCAACCATCCT CCGCCATGTGGGCACTGATTTCGGCCTGTCTCCTTCTCAGCCCGGACGGCCGTCCCGTGTACGCGGCGGATGCGA GCCAGATGGCTTCCTACTTTGACTGTCTCGGATACACCTGTCCCCATACCGCAAGCCTGGCTGACTTCGTTATTG ATATAACAGCTGGCTCTTCTTCTCGGGAATTAGAAAGCCTAATAGATAAGTGGACGCATTGGCAGTCATCAGAAA TGTCGACAGCTTCAGAAACCCCTACCCTCTGGCATCTTGACCCCTCTGGCCCCCAAACCAAATGCCGCCGCTTCA TTCCTACTACCCGCGTCCTCCTGCACCGCGCCTACCTCAACATGCTCCGCAGCCCTATATTATCTGTTTTGACAG CATAA |