Protein ID | Ani_SJS72_1|g10672.t1 |
Gene name | |
Location | scaffold_151:44323..45509 |
Strand | + |
Gene length (bp) | 1186 |
Transcript length (bp) | 918 |
Coding sequence length (bp) | 918 |
Protein length (aa) | 306 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00153 | Mito_carr | Mitochondrial carrier protein | 1.3E-24 | 9 | 98 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.8E-16 | 117 | 194 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 7.0E-19 | 210 | 301 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 23 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 32 | 22 |
2 | 278 | 300 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g10672.t1 MSNNNTQKPLPFGYQFIAGAVAGVSEILVMYPLDVVKTRVQLQKGTAVAGEEYYNGMFDCLRKIVKNEGFSRLYR GISAPILMEAPKRATKFAANDSWGAFYRNLFGAEKQTQSLAILTGATAGATESFVVVPFELVKIRLQDRASAGKY NGMLDVVKKIVAAEGPLAMYNGLESTLWRHILWNSGYFGCIFQVRAQLPAAEPGNKSQQTRNDLIAGTIGGTAGT ILNTPMDVVKSRIQNTSKVPGQVPKYNWAWPAVGTVMKEEGFAALYKGFLPKVLRLGPGGGILLVVFTGVMDFFR NMRGE* |
Coding | >Ani_SJS72_1|g10672.t1 ATGTCGAACAACAACACCCAGAAGCCTTTGCCCTTCGGCTACCAATTCATTGCCGGTGCCGTCGCCGGTGTGTCC GAGATTCTGGTTATGTACCCCTTGGACGTGGTCAAGACCCGAGTTCAACTCCAGAAGGGCACCGCGGTCGCCGGT GAGGAATACTACAATGGCATGTTCGACTGCCTGCGCAAGATCGTCAAGAACGAGGGCTTCTCCCGCCTGTACCGC GGTATCTCCGCCCCCATCCTAATGGAAGCGCCCAAGCGTGCGACCAAATTCGCCGCCAACGACAGCTGGGGCGCC TTCTACCGCAACCTGTTCGGCGCCGAGAAGCAGACGCAATCGCTGGCGATCCTGACCGGTGCGACGGCCGGAGCG ACCGAGTCGTTCGTCGTCGTCCCCTTCGAGCTGGTCAAGATCCGTCTGCAGGACCGCGCCTCGGCCGGCAAATAC AACGGCATGCTGGACGTCGTGAAGAAGATTGTCGCCGCGGAGGGTCCCCTCGCTATGTACAACGGTCTGGAATCC ACCCTGTGGCGCCACATCCTCTGGAACTCGGGTTACTTCGGCTGTATCTTCCAGGTGCGGGCGCAGCTCCCTGCC GCGGAGCCGGGCAACAAGAGCCAGCAGACACGCAATGATCTGATCGCGGGTACGATTGGTGGTACGGCTGGTACG ATCCTCAACACGCCCATGGATGTCGTCAAGTCCCGCATTCAGAACACCTCAAAGGTCCCCGGTCAAGTGCCCAAG TATAACTGGGCTTGGCCGGCCGTCGGAACTGTCATGAAGGAGGAAGGATTCGCCGCTTTGTATAAGGGATTCTTG CCCAAGGTGCTGAGATTGGGTCCTGGTGGTGGTATCCTTCTGGTTGTGTTTACGGGAGTCATGGACTTCTTTAGG AATATGAGGGGCGAGTAA |
Transcript | >Ani_SJS72_1|g10672.t1 ATGTCGAACAACAACACCCAGAAGCCTTTGCCCTTCGGCTACCAATTCATTGCCGGTGCCGTCGCCGGTGTGTCC GAGATTCTGGTTATGTACCCCTTGGACGTGGTCAAGACCCGAGTTCAACTCCAGAAGGGCACCGCGGTCGCCGGT GAGGAATACTACAATGGCATGTTCGACTGCCTGCGCAAGATCGTCAAGAACGAGGGCTTCTCCCGCCTGTACCGC GGTATCTCCGCCCCCATCCTAATGGAAGCGCCCAAGCGTGCGACCAAATTCGCCGCCAACGACAGCTGGGGCGCC TTCTACCGCAACCTGTTCGGCGCCGAGAAGCAGACGCAATCGCTGGCGATCCTGACCGGTGCGACGGCCGGAGCG ACCGAGTCGTTCGTCGTCGTCCCCTTCGAGCTGGTCAAGATCCGTCTGCAGGACCGCGCCTCGGCCGGCAAATAC AACGGCATGCTGGACGTCGTGAAGAAGATTGTCGCCGCGGAGGGTCCCCTCGCTATGTACAACGGTCTGGAATCC ACCCTGTGGCGCCACATCCTCTGGAACTCGGGTTACTTCGGCTGTATCTTCCAGGTGCGGGCGCAGCTCCCTGCC GCGGAGCCGGGCAACAAGAGCCAGCAGACACGCAATGATCTGATCGCGGGTACGATTGGTGGTACGGCTGGTACG ATCCTCAACACGCCCATGGATGTCGTCAAGTCCCGCATTCAGAACACCTCAAAGGTCCCCGGTCAAGTGCCCAAG TATAACTGGGCTTGGCCGGCCGTCGGAACTGTCATGAAGGAGGAAGGATTCGCCGCTTTGTATAAGGGATTCTTG CCCAAGGTGCTGAGATTGGGTCCTGGTGGTGGTATCCTTCTGGTTGTGTTTACGGGAGTCATGGACTTCTTTAGG AATATGAGGGGCGAGTAA |
Gene | >Ani_SJS72_1|g10672.t1 ATGTCGAACAACAACACCCAGAAGCCTTTGCCCTTCGGCTACCAATTCATTGCCGGTGCCGTCGCCGGTGTGTCC GAGGTACGTATGGTGTGATCCCGTTGCCAGTTTACCGGAGCACGCGACTAACTCTGCAATAGATTCTGGTTATGT GCGCAATTCCTACCCTCAATCGACGCATTCCGACCAGCCAACACTAACCCTTTACCCCCCAGGTACCCCTTGGAC GTGGTCAAGACCCGAGTGTAAGCTCTACCTCTCTTATCTCTTCCCAATTGCAATCGATCAATCCCCGCCCACTAA CCCATTCCACCCTCACAGTCAACTCCAGAAGGGCACCGCGGTCGCCGGTGAGGAATACTACAATGGCATGTTCGA CTGCCTGCGCAAGATCGTCAAGAACGAGGGGTACGCCAATTGCTTTTCCCCCCACCTCCCACTCACAACAAACTA ACCCACCCTCTTCCCCCATAACAGCTTCTCCCGCCTGTACCGCGGTATCTCCGCCCCCATCCTAATGGAAGCGCC CAAGCGTGCGACCAAATTCGCCGCCAACGACAGCTGGGGCGCCTTCTACCGCAACCTGTTCGGCGCCGAGAAGCA GACGCAATCGCTGGCGATCCTGACCGGTGCGACGGCCGGAGCGACCGAGTCGTTCGTCGTCGTCCCCTTCGAGCT GGTCAAGATCCGTCTGCAGGACCGCGCCTCGGCCGGCAAATACAACGGCATGCTGGACGTCGTGAAGAAGATTGT CGCCGCGGAGGGTCCCCTCGCTATGTACAACGGTCTGGAATCCACCCTGTGGCGCCACATCCTCTGGAACTCGGG TTACTTCGGCTGTATCTTCCAGGTGCGGGCGCAGCTCCCTGCCGCGGAGCCGGGCAACAAGAGCCAGCAGACACG CAATGATCTGATCGCGGGTACGATTGGTGGTACGGCTGGTACGATCCTCAACACGCCCATGGATGTCGTCAAGTC CCGCATTCAGAACACCTCAAAGGTCCCCGGTCAAGTGCCCAAGTATAACTGGGCTTGGCCGGCCGTCGGAACTGT CATGAAGGAGGAAGGATTCGCCGCTTTGTATAAGGGATTCTTGCCCAAGGTGCTGAGATTGGGTCCTGGTGGTGG TATCCTTCTGGTTGTGTTTACGGGAGTCATGGACTTCTTTAGGAATATGAGGGGCGAGTAA |