© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10622.t1 |
| Gene name | |
| Location | scaffold_148:34633..35559 |
| Strand | - |
| Gene length (bp) | 926 |
| Transcript length (bp) | 753 |
| Coding sequence length (bp) | 753 |
| Protein length (aa) | 251 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04442 | CtaG_Cox11 | Cytochrome c oxidase assembly protein CtaG/Cox11 | 2.7E-59 | 81 | 235 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005507 | copper ion binding | Yes |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0046872 | metal ion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 63 | 85 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10622.t1 MFSRPISSWGRLPWSGPGLRPSTMTNTRCVDSGRRFFTRSSCLRQNINAPFNTPQSQKRNASTMYYAASLILGTV ALAYGSVPLYKMICQQTGWNGQPVLTHRGGDNDTSSRVTPVTDSRRLRITFNGSVSDVLPWKFTPQQREVRVLPG ETALAFFTATNKGPTDIIGVATYSVTPGQVAPYFSKIQCFCFDEQKLNAGESVDMPVFFFIDPDFVKDPAMKGID TITLSYTFFKARYDDNGVLKPLPSS* |
| Coding | >Ani_SJS72_1|g10622.t1 ATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTCGGGTCCCGGCCTCCGCCCGTCCACCATGACA AATACACGATGTGTTGACTCTGGGAGGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATCAACGCACCG TTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGATGTACTATGCGGCCAGTCTTATTCTCGGAACCGTT GCGCTTGCCTATGGCTCCGTCCCTCTGTACAAAATGATCTGCCAACAAACCGGTTGGAACGGTCAACCTGTACTC ACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCGTCACTCCGGTCACCGACTCCCGTCGTTTGAGAATCACA TTCAATGGATCAGTTTCGGATGTTCTGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCGAGTTCTTCCAGGC GAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGGGCCCGACGGATATCATTGGTGTAGCGACGTACAGTGTC ACTCCCGGACAAGTTGCTCCTTACTTCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAAGCTGAATGCTGGA GAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACCCCGACTTTGTCAAAGATCCGGCCATGAAGGGCATTGAT ACGATTACGCTCTCATATACCTTCTTCAAGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTGCCGTCGAGC TAA |
| Transcript | >Ani_SJS72_1|g10622.t1 ATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTCGGGTCCCGGCCTCCGCCCGTCCACCATGACA AATACACGATGTGTTGACTCTGGGAGGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATCAACGCACCG TTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGATGTACTATGCGGCCAGTCTTATTCTCGGAACCGTT GCGCTTGCCTATGGCTCCGTCCCTCTGTACAAAATGATCTGCCAACAAACCGGTTGGAACGGTCAACCTGTACTC ACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCGTCACTCCGGTCACCGACTCCCGTCGTTTGAGAATCACA TTCAATGGATCAGTTTCGGATGTTCTGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCGAGTTCTTCCAGGC GAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGGGCCCGACGGATATCATTGGTGTAGCGACGTACAGTGTC ACTCCCGGACAAGTTGCTCCTTACTTCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAAGCTGAATGCTGGA GAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACCCCGACTTTGTCAAAGATCCGGCCATGAAGGGCATTGAT ACGATTACGCTCTCATATACCTTCTTCAAGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTGCCGTCGAGC TAA |
| Gene | >Ani_SJS72_1|g10622.t1 ATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTCGGGTCCCGGCCTCCGCCCGTCCACCATGACA AATACACGATGTGTTGACTCTGGGAGGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATCAACGCACCG TTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGATGTATGTTAAAGGAGCGCAATGGTGTCTGCAGTTC ACGTCTAATAGGTTCTAGGTACTATGCGGCCAGTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCTCCGTCCC TCTGTACAAAATGGTTCGACAAGCCTGCCCTTGAATTCTAGTCTGCGGCAGAGGCTAACGGCTCTATTCTTACAG ATCTGCCAACAAACCGGTTGGAACGGTCAACCTGTACTCACTCACCGTGGAGGCGACAATGATACCTCTTCCCGC GTCACTCCGGTCACCGACTCCCGTCGTTTGAGAATCACATTCAATGGATCAGTTTCGGATGTTCTGCCGTGGAAG TTCACACCGCAACAACGTGAAGTTCGAGTTCTTCCAGGCGAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAG GGCCCGACGGATATCATTGGTGTAGCGACGTACAGTGTCACTCCCGGACAAGTTGCTCCTTACTTCAGCAAGATC CAATGCTTTTGCTTCGACGAGCAGAAGCTGAATGCTGGAGAATCGGTTGACATGCCGGTGTTCTTCTTCATCGAC CCCGACTTTGTCAAAGATCCGGCCATGAAGGGCATTGATACGATTACGCTCTCATATACCTTCTTCAGTAAGACT CCAGAATGAACCCATGATGGGGTATGTTTGTGGCTAATGAAAGCGAAACAGAGGCGCGATATGATGACAACGGTG TCTTGAAGCCATTGCCGTCGAGCTAA |