© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10614.t1 |
| Gene name | |
| Location | scaffold_148:16180..17426 |
| Strand | - |
| Gene length (bp) | 1246 |
| Transcript length (bp) | 975 |
| Coding sequence length (bp) | 975 |
| Protein length (aa) | 325 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03388 | Lectin_leg-like | Legume-like lectin family | 1.9E-66 | 36 | 258 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 291 | 313 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10614.t1 MLLPRLSSLLCWAGLASVPLASAYDGDDNVKSIPLRTHSLSPPYLDSDFQSRWFDFGGDTIIRADKYIRLTSDRP SQQGWIFSRVPLTATNWEIEVEFKIEGSGNLHGDGFAMWLTKQRATQGPVFGSTDNFEGLGIFFDTYKNNRPGTS FPYVMAMMGDGQTTYDQAHDGKANELAGCSARGLRGASIPTKARLTYFQDKSLTLDLQYKSEDSWIPCFELTAPE YNIAIPSVAYLGFSAETGELSDNHDIISVKAQNLYSVGGGSSGSSSRSGKGRDTGRVKRRKQKGSWGWFLFKTVL FFAVVVGGYVGYTAYRTKHRYSRF* |
| Coding | >Ani_SJS72_1|g10614.t1 ATGCTACTTCCGCGGCTTTCGTCCCTTTTGTGCTGGGCTGGCTTGGCCAGCGTGCCTCTGGCCAGCGCCTACGAT GGTGATGACAATGTCAAGAGCATTCCGCTTCGCACGCACAGTCTTTCACCGCCATACTTGGATTCCGACTTCCAA AGCCGCTGGTTCGATTTTGGTGGTGACACGATAATTCGCGCCGACAAATACATCCGTCTTACGTCTGATCGCCCG TCGCAGCAGGGATGGATCTTTTCTCGTGTGCCTCTGACCGCGACAAACTGGGAGATCGAGGTTGAATTCAAGATC GAAGGGTCCGGCAACTTGCACGGCGATGGCTTCGCCATGTGGCTCACCAAGCAGCGCGCCACCCAGGGCCCTGTC TTCGGTTCGACGGATAACTTTGAGGGTCTGGGTATCTTCTTTGACACGTACAAGAACAACCGTCCCGGCACTTCG TTCCCCTACGTCATGGCCATGATGGGCGATGGCCAGACTACCTACGACCAGGCTCACGATGGAAAGGCCAATGAA CTGGCGGGCTGTTCTGCTCGTGGTCTCCGTGGTGCCTCCATCCCTACCAAGGCCCGCTTGACTTACTTCCAGGAC AAGTCCTTGACCCTGGACCTGCAGTACAAGTCCGAGGACAGCTGGATTCCCTGCTTCGAGCTGACTGCCCCCGAG TACAACATCGCTATTCCCTCCGTTGCCTACCTGGGCTTCTCTGCCGAGACTGGTGAGCTCAGCGATAACCATGAC ATCATCTCCGTCAAGGCCCAGAACCTGTACAGCGTTGGTGGCGGCAGCAGTGGCAGCTCTTCCCGCTCGGGCAAG GGCCGTGACACTGGCCGTGTCAAGCGCCGTAAGCAGAAGGGCAGCTGGGGATGGTTCTTGTTCAAGACTGTTCTG TTCTTTGCTGTGGTTGTGGGAGGTTATGTCGGGTACACTGCGTACCGCACCAAGCACCGCTACTCGCGGTTCTAG |
| Transcript | >Ani_SJS72_1|g10614.t1 ATGCTACTTCCGCGGCTTTCGTCCCTTTTGTGCTGGGCTGGCTTGGCCAGCGTGCCTCTGGCCAGCGCCTACGAT GGTGATGACAATGTCAAGAGCATTCCGCTTCGCACGCACAGTCTTTCACCGCCATACTTGGATTCCGACTTCCAA AGCCGCTGGTTCGATTTTGGTGGTGACACGATAATTCGCGCCGACAAATACATCCGTCTTACGTCTGATCGCCCG TCGCAGCAGGGATGGATCTTTTCTCGTGTGCCTCTGACCGCGACAAACTGGGAGATCGAGGTTGAATTCAAGATC GAAGGGTCCGGCAACTTGCACGGCGATGGCTTCGCCATGTGGCTCACCAAGCAGCGCGCCACCCAGGGCCCTGTC TTCGGTTCGACGGATAACTTTGAGGGTCTGGGTATCTTCTTTGACACGTACAAGAACAACCGTCCCGGCACTTCG TTCCCCTACGTCATGGCCATGATGGGCGATGGCCAGACTACCTACGACCAGGCTCACGATGGAAAGGCCAATGAA CTGGCGGGCTGTTCTGCTCGTGGTCTCCGTGGTGCCTCCATCCCTACCAAGGCCCGCTTGACTTACTTCCAGGAC AAGTCCTTGACCCTGGACCTGCAGTACAAGTCCGAGGACAGCTGGATTCCCTGCTTCGAGCTGACTGCCCCCGAG TACAACATCGCTATTCCCTCCGTTGCCTACCTGGGCTTCTCTGCCGAGACTGGTGAGCTCAGCGATAACCATGAC ATCATCTCCGTCAAGGCCCAGAACCTGTACAGCGTTGGTGGCGGCAGCAGTGGCAGCTCTTCCCGCTCGGGCAAG GGCCGTGACACTGGCCGTGTCAAGCGCCGTAAGCAGAAGGGCAGCTGGGGATGGTTCTTGTTCAAGACTGTTCTG TTCTTTGCTGTGGTTGTGGGAGGTTATGTCGGGTACACTGCGTACCGCACCAAGCACCGCTACTCGCGGTTCTAG |
| Gene | >Ani_SJS72_1|g10614.t1 ATGCTACTTCCGCGGCTTTCGTCCCTTTTGTGCTGGGCTGGCTTGGCCAGCGTGCCTCTGGCCAGCGCCTACGAT GGTGATGACAATGTCAAGAGCATTCCGGTGTGTATGCTGCTGTCATAGGCTATAGGATGGTCTGCTAACTGGTCT CGGGATAGCTTCGCACGCACAGTCTTTCACCGGTGGGTCGCTTATAGCTGCAGCCATGCTTGCGCATCATGTTAA TGTCATTTCGCAGCCATACTTGGATTCCGACTTCCAAAGCCGCTGGTTCGATTTTGGTGGTGACACGATAATTCG CGCCGACAAGTATGTTCGCCTGTCTCGTGGTTAGATGGGAGTGAGCTTATGCTGAACAACATCTTAGATACATCC GTCTTACGTCTGATCGCCCGTCGCAGCAGGGATGGATCTTTTCTCGTGTGCCTCTGACCGCGACAAACTGGGAGG TTAGTTGATACACTTTCTATGGGTTCGGGGCAATTCTGATATGTGCAGATCGAGGTTGAATTCAAGATCGAAGGG TCCGGCAACTTGCACGGCGATGGCTTCGCCATGTGGCTCACCAAGCAGCGCGCCACCCAGGGCCCTGTCTTCGGT TCGACGGATAACTTTGAGGGTCTGGGTATCTTCTTTGACACGTACAAGAACAACCGTCCCGGCACTTCGTTCCCC TACGTCATGGCCATGATGGGCGATGGCCAGACTACCTACGACCAGGCTCACGATGGAAAGGCCAATGAACTGGCG GGCTGTTCTGTAAGTATAGTGTGTAGAGGTGCTATGAATGTTGATCTGACTATTGCTATAGGCTCGTGGTCTCCG TGGTGCCTCCATCCCTACCAAGGCCCGCTTGACTTACTTCCAGGACAAGTCCTTGACCCTGGACCTGCAGTACAA GTCCGAGGACAGCTGGATTCCCTGCTTCGAGCTGACTGCCCCCGAGTACAACATCGCTATTCCCTCCGTTGCCTA CCTGGGCTTCTCTGCCGAGACTGGTGAGCTCAGCGATAACCATGACATCATCTCCGTCAAGGCCCAGAACCTGTA CAGCGTTGGTGGCGGCAGCAGTGGCAGCTCTTCCCGCTCGGGCAAGGGCCGTGACACTGGCCGTGTCAAGCGCCG TAAGCAGAAGGGCAGCTGGGGATGGTTCTTGTTCAAGACTGTTCTGTTCTTTGCTGTGGTTGTGGGAGGTTATGT CGGGTACACTGCGTACCGCACCAAGCACCGCTACTCGCGGTTCTAG |