© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g10509.t1 |
| Gene name | |
| Location | scaffold_143:20659..21700 |
| Strand | + |
| Gene length (bp) | 1041 |
| Transcript length (bp) | 885 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 2.4E-22 | 131 | 251 |
| PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 2.4E-21 | 155 | 286 |
| PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 9.3E-09 | 31 | 131 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 203 | 225 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10509.t1 MQQMKAVRAVTAGGNKLMTELREEPLPSPGQHEVLIRVHAVSLNYRDAVLLRGDFPVNSKEEVIPVSDGAGEVIA VGPGVKRVKPNDRVAVGCFTTWIGGPFIPEYFRTSAGFSIDGMLAEYVLFHEDALITKIYGARVLAITSSDTKAA RLKALGADAVVNYNTSPDWNREILTLTDGKGVDRTLDIAGEKTIQKAAACTKIGGVIILIGFASGLGGGIPPIDI MARTLTLTGSIIGSRLDFEAMLAAMARHELRPVIDQVYPFAEYKEAYQRLESGQQVGKVVIEIVNQTAD* |
| Coding | >Ani_SJS72_1|g10509.t1 ATGCAGCAAATGAAAGCAGTCCGCGCTGTTACCGCAGGAGGTAATAAGCTTATGACCGAGCTTCGTGAGGAACCT TTGCCCAGCCCAGGTCAACACGAAGTTTTGATCCGGGTTCACGCCGTCTCACTCAACTACCGAGATGCAGTGCTA CTGCGAGGCGACTTTCCTGTCAATAGCAAGGAGGAGGTGATTCCTGTTTCCGACGGCGCCGGCGAGGTTATCGCG GTCGGGCCAGGAGTAAAACGGGTTAAACCCAATGATCGGGTTGCAGTCGGTTGTTTTACAACCTGGATTGGCGGC CCATTTATTCCAGAATATTTCCGCACGAGCGCTGGGTTTAGCATCGATGGAATGCTCGCAGAGTACGTGCTCTTT CATGAAGATGCACTTATTACGAAAATCTATGGCGCTCGTGTGCTGGCTATTACCTCGTCTGATACCAAAGCTGCT AGGCTGAAGGCACTCGGTGCAGATGCTGTAGTAAACTACAACACTTCTCCAGACTGGAATCGCGAGATCTTGACT CTAACTGATGGCAAGGGGGTGGACAGGACCCTTGATATTGCTGGAGAGAAGACTATTCAGAAAGCCGCGGCATGT ACTAAGATAGGTGGTGTAATTATTCTAATCGGCTTTGCAAGTGGTCTTGGTGGCGGTATCCCGCCTATTGATATC ATGGCTCGGACCCTGACGTTAACTGGATCAATTATCGGGTCACGACTAGATTTTGAGGCAATGCTTGCGGCAATG GCAAGACATGAGTTGAGGCCGGTTATTGATCAGGTGTACCCCTTTGCGGAATACAAGGAGGCTTATCAAAGACTG GAGAGCGGACAGCAGGTTGGCAAAGTTGTTATTGAAATTGTTAATCAGACTGCTGATTAG |
| Transcript | >Ani_SJS72_1|g10509.t1 ATGCAGCAAATGAAAGCAGTCCGCGCTGTTACCGCAGGAGGTAATAAGCTTATGACCGAGCTTCGTGAGGAACCT TTGCCCAGCCCAGGTCAACACGAAGTTTTGATCCGGGTTCACGCCGTCTCACTCAACTACCGAGATGCAGTGCTA CTGCGAGGCGACTTTCCTGTCAATAGCAAGGAGGAGGTGATTCCTGTTTCCGACGGCGCCGGCGAGGTTATCGCG GTCGGGCCAGGAGTAAAACGGGTTAAACCCAATGATCGGGTTGCAGTCGGTTGTTTTACAACCTGGATTGGCGGC CCATTTATTCCAGAATATTTCCGCACGAGCGCTGGGTTTAGCATCGATGGAATGCTCGCAGAGTACGTGCTCTTT CATGAAGATGCACTTATTACGAAAATCTATGGCGCTCGTGTGCTGGCTATTACCTCGTCTGATACCAAAGCTGCT AGGCTGAAGGCACTCGGTGCAGATGCTGTAGTAAACTACAACACTTCTCCAGACTGGAATCGCGAGATCTTGACT CTAACTGATGGCAAGGGGGTGGACAGGACCCTTGATATTGCTGGAGAGAAGACTATTCAGAAAGCCGCGGCATGT ACTAAGATAGGTGGTGTAATTATTCTAATCGGCTTTGCAAGTGGTCTTGGTGGCGGTATCCCGCCTATTGATATC ATGGCTCGGACCCTGACGTTAACTGGATCAATTATCGGGTCACGACTAGATTTTGAGGCAATGCTTGCGGCAATG GCAAGACATGAGTTGAGGCCGGTTATTGATCAGGTGTACCCCTTTGCGGAATACAAGGAGGCTTATCAAAGACTG GAGAGCGGACAGCAGGTTGGCAAAGTTGTTATTGAAATTGTTAATCAGACTGCTGATTAG |
| Gene | >Ani_SJS72_1|g10509.t1 ATGCAGCAAATGAAAGCAGTCCGCGCTGTTACCGCAGGAGGTAATAAGCTTATGACCGAGCTTCGTGAGGAACCT TTGCCCAGCCCAGGTCAACACGAAGTTTTGATCCGGGTTCACGCCGTCTCACTCAACTACCGAGATGCAGTGCTA CTGCGAGGCGACTTTCCTGTCAATAGCAAGGAGGAGGTGATTCCTGTTTCCGACGGCGCCGGCGAGGTTATCGCG GTCGGGCCAGGAGTAAAACGGGTTAAACCCAATGATCGGGTTGCAGTCGGTTGTTTTACAACCTGGATTGGCGGC CCATTTATTCCAGAATATTTCCGCACGAGCGCTGGGTTTAGCATCGATGGAATGCTCGCAGAGTACGTGCTCTTT CATGAAGATGCACTTGTATACATTCCCGATTATATGTCCTATGCTGAAGCTGCTTCGCTTCCCTGTGCAGCAGTC ACAGCGTGGACAGCACTGGATTAAATTGAGCCTCTTCAGCCTGGCCAGACGGTACTGATTCAAGGAACCGGGGGC GTTTCACTATTCGCGCTACAGATTACGAAAATCTATGGCGCTCGTGTGCTGGCTATTACCTCGTCTGATACCAAA GCTGCTAGGCTGAAGGCACTCGGTGCAGATGCTGTAGTAAACTACAACACTTCTCCAGACTGGAATCGCGAGATC TTGACTCTAACTGATGGCAAGGGGGTGGACAGGACCCTTGATATTGCTGGAGAGAAGACTATTCAGAAAGCCGCG GCATGTACTAAGATAGGTGGTGTAATTATTCTAATCGGCTTTGCAAGTGGTCTTGGTGGCGGTATCCCGCCTATT GATATCATGGCTCGGACCCTGACGTTAACTGGATCAATTATCGGGTCACGACTAGATTTTGAGGCAATGCTTGCG GCAATGGCAAGACATGAGTTGAGGCCGGTTATTGATCAGGTGTACCCCTTTGCGGAATACAAGGAGGCTTATCAA AGACTGGAGAGCGGACAGCAGGTTGGCAAAGTTGTTATTGAAATTGTTAATCAGACTGCTGATTAG |