© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10465.t1 |
| Gene name | |
| Location | scaffold_140:54115..54956 |
| Strand | - |
| Gene length (bp) | 841 |
| Transcript length (bp) | 732 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 55 | 74 | 19 |
| 3 | 87 | 109 | 22 |
| 4 | 124 | 146 | 22 |
| 5 | 158 | 177 | 19 |
| 6 | 197 | 219 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10465.t1 MGAVTYRDGIAILQLVIFPFIFAAYPATLFLIRIAGSIASLLSIDHDSKNVEIAIAVYELIGLAPFLLTYVGVLR QIDVNQVVPVRWLNLVSLVGIIGLIIGIAGVSTADDNGGSYQPTTTVKASMGIFIVLFVIYYLIAAFMFLQLCDL KASQKKLFLAIILSTPFILVRVVYAAIGDFTTIERFSIISVNGSPTIYLVMDVLEEIVAMAITMFLGMSAVLDPD FVRLTPDQMKSEPKPEVV* |
| Coding | >Ani_SJS72_1|g10465.t1 ATGGGCGCTGTAACCTACCGTGATGGCATTGCTATCTTACAACTTGTTATCTTTCCCTTTATCTTCGCCGCGTAC CCTGCTACGCTCTTTCTTATTCGGATTGCCGGCAGTATCGCATCGCTATTGTCCATCGATCATGATTCCAAGAAC GTCGAGATCGCCATTGCTGTATACGAGTTGATTGGTCTTGCCCCTTTTTTGTTGACCTACGTCGGAGTTCTAAGA CAAATTGATGTTAATCAAGTAGTACCAGTCAGATGGCTTAATCTTGTGTCTCTAGTCGGTATCATCGGTCTCATT ATTGGTATTGCTGGAGTCAGCACCGCCGATGACAACGGAGGCAGCTACCAGCCAACAACCACCGTCAAAGCTTCC ATGGGAATCTTCATTGTTCTTTTCGTGATCTATTATCTGATCGCCGCGTTCATGTTCCTCCAGCTGTGTGATTTG AAGGCGTCCCAGAAGAAGTTGTTTCTTGCTATTATCCTCTCCACGCCTTTCATCTTGGTCCGCGTGGTCTACGCA GCGATCGGCGATTTCACCACCATCGAGCGGTTCTCGATCATCAGCGTTAACGGAAGCCCCACTATCTACTTGGTC ATGGATGTGCTGGAAGAGATTGTTGCCATGGCTATCACGATGTTTCTTGGCATGTCGGCTGTGCTGGACCCTGAC TTTGTGCGCCTTACCCCGGATCAGATGAAGTCTGAGCCGAAGCCAGAGGTTGTTTGA |
| Transcript | >Ani_SJS72_1|g10465.t1 ATGGGCGCTGTAACCTACCGTGATGGCATTGCTATCTTACAACTTGTTATCTTTCCCTTTATCTTCGCCGCGTAC CCTGCTACGCTCTTTCTTATTCGGATTGCCGGCAGTATCGCATCGCTATTGTCCATCGATCATGATTCCAAGAAC GTCGAGATCGCCATTGCTGTATACGAGTTGATTGGTCTTGCCCCTTTTTTGTTGACCTACGTCGGAGTTCTAAGA CAAATTGATGTTAATCAAGTAGTACCAGTCAGATGGCTTAATCTTGTGTCTCTAGTCGGTATCATCGGTCTCATT ATTGGTATTGCTGGAGTCAGCACCGCCGATGACAACGGAGGCAGCTACCAGCCAACAACCACCGTCAAAGCTTCC ATGGGAATCTTCATTGTTCTTTTCGTGATCTATTATCTGATCGCCGCGTTCATGTTCCTCCAGCTGTGTGATTTG AAGGCGTCCCAGAAGAAGTTGTTTCTTGCTATTATCCTCTCCACGCCTTTCATCTTGGTCCGCGTGGTCTACGCA GCGATCGGCGATTTCACCACCATCGAGCGGTTCTCGATCATCAGCGTTAACGGAAGCCCCACTATCTACTTGGTC ATGGATGTGCTGGAAGAGATTGTTGCCATGGCTATCACGATGTTTCTTGGCATGTCGGCTGTGCTGGACCCTGAC TTTGTGCGCCTTACCCCGGATCAGATGAAGTCTGAGCCGAAGCCAGAGGTTGTTTGA |
| Gene | >Ani_SJS72_1|g10465.t1 ATGGGCGCTGTAACCTACCGTGATGGCATTGCTATCTTACAACTTGTTATCTTTCCCTTTATCTTCGCCGCGGTG ATTTTCATATGGAACCGGGCTGGCTGGAGGGTTGGGAGCAAGATCTGGTAGTACCCTGCTACGCTCTTTCTTATT CGGATTGCCGGCAGTATCGCATCGCTATTGTCCATCGATCATGATTCCAAGAACGTCGAGATCGCCATTGCTGTA TACGAGTTGATTGGTCTTGCCCCTTTTTTGTTGACCTACGTCGGAGTTCTAAGACAAATGTGAGTCCCCTCGAAT AAGTAGCAGATATCCACATGACGCTAACTCCTCTACCAGTGATGTTAATCAAGTAGTACCAGTCAGATGGCTTAA TCTTGTGTCTCTAGTCGGTATCATCGGTCTCATTATTGGTATTGCTGGAGTCAGCACCGCCGATGACAACGGAGG CAGCTACCAGCCAACAACCACCGTCAAAGCTTCCATGGGAATCTTCATTGTTCTTTTCGTGATCTATTATCTGAT CGCCGCGTTCATGTTCCTCCAGCTGTGTGATTTGAAGGCGTCCCAGAAGAAGTTGTTTCTTGCTATTATCCTCTC CACGCCTTTCATCTTGGTCCGCGTGGTCTACGCAGCGATCGGCGATTTCACCACCATCGAGCGGTTCTCGATCAT CAGCGTTAACGGAAGCCCCACTATCTACTTGGTCATGGATGTGCTGGAAGAGATTGTTGCCATGGCTATCACGAT GTTTCTTGGCATGTCGGCTGTGCTGGACCCTGACTTTGTGCGCCTTACCCCGGATCAGATGAAGTCTGAGCCGAA GCCAGAGGTTGTTTGA |