Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g10429.t1
Gene name
Location	scaffold_138:61341..62141
Strand	+
Gene length (bp)	800
Transcript length (bp)	747
Coding sequence length (bp)	747
Protein length (aa)	249

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12348	CLASP_N	CLASP N terminal	8.0E-59	57	248
PF02985	HEAT	HEAT repeat	1.7E-03	148	175

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g10429.t1 MLFRFEITLGPAELSFVLVFLAFFGILRLFLFALCFLCTFYLIEKYASSVKDWIKSMEPKATELVATLKNLNLAI DAKVSFLNSVKSDIKQKNVSEGAIPPIFESLRLSIASSHSTLLSAGFSTLGHFLKRLFIQEQHSIVASQARHLYP LLLERLGDHKERVRAQAAQAFTDFWPAASHEVEQHVLGTALVGKNNRAREMSMIWLANMAKQYGLLFRPYVPSLV ACLEDADSAVRDTAKATIVELFQ*
Coding	>Ani_SJS72_1\|g10429.t1 ATGTTGTTCAGATTTGAGATTACTCTCGGCCCTGCTGAGCTGAGCTTTGTGCTTGTCTTTCTCGCGTTTTTCGGT ATTCTGCGGCTGTTTTTGTTTGCTTTGTGCTTCCTGTGTACCTTTTATCTCATCGAAAAGTATGCTTCCAGTGTG AAAGACTGGATTAAGAGTATGGAACCGAAGGCTACCGAGTTGGTAGCAACTTTGAAAAACCTGAACCTGGCCATA GATGCCAAGGTCAGCTTCTTAAATTCTGTTAAGTCAGACATCAAGCAGAAGAATGTTTCAGAGGGCGCAATTCCA CCGATCTTTGAATCGTTGCGTCTGTCAATTGCCTCTTCTCACTCCACACTTCTGTCTGCTGGTTTCTCCACCTTG GGTCACTTTTTGAAGCGACTGTTCATTCAAGAACAGCATAGTATAGTTGCTTCGCAGGCTCGCCACCTTTACCCG TTGCTCCTGGAACGCCTGGGCGATCACAAGGAGCGAGTCAGAGCACAGGCGGCCCAAGCGTTCACTGACTTTTGG CCTGCAGCTAGCCATGAAGTTGAACAACATGTCCTGGGAACGGCCCTTGTCGGCAAAAACAACAGAGCTAGGGAA ATGAGCATGATCTGGCTAGCTAATATGGCTAAGCAGTATGGCTTGCTCTTCCGTCCGTATGTCCCTAGTCTTGTG GCATGTCTCGAGGACGCCGATAGTGCCGTCAGAGATACAGCCAAGGCGACCATTGTCGAGCTGTTCCAGTAA
Transcript	>Ani_SJS72_1\|g10429.t1 ATGTTGTTCAGATTTGAGATTACTCTCGGCCCTGCTGAGCTGAGCTTTGTGCTTGTCTTTCTCGCGTTTTTCGGT ATTCTGCGGCTGTTTTTGTTTGCTTTGTGCTTCCTGTGTACCTTTTATCTCATCGAAAAGTATGCTTCCAGTGTG AAAGACTGGATTAAGAGTATGGAACCGAAGGCTACCGAGTTGGTAGCAACTTTGAAAAACCTGAACCTGGCCATA GATGCCAAGGTCAGCTTCTTAAATTCTGTTAAGTCAGACATCAAGCAGAAGAATGTTTCAGAGGGCGCAATTCCA CCGATCTTTGAATCGTTGCGTCTGTCAATTGCCTCTTCTCACTCCACACTTCTGTCTGCTGGTTTCTCCACCTTG GGTCACTTTTTGAAGCGACTGTTCATTCAAGAACAGCATAGTATAGTTGCTTCGCAGGCTCGCCACCTTTACCCG TTGCTCCTGGAACGCCTGGGCGATCACAAGGAGCGAGTCAGAGCACAGGCGGCCCAAGCGTTCACTGACTTTTGG CCTGCAGCTAGCCATGAAGTTGAACAACATGTCCTGGGAACGGCCCTTGTCGGCAAAAACAACAGAGCTAGGGAA ATGAGCATGATCTGGCTAGCTAATATGGCTAAGCAGTATGGCTTGCTCTTCCGTCCGTATGTCCCTAGTCTTGTG GCATGTCTCGAGGACGCCGATAGTGCCGTCAGAGATACAGCCAAGGCGACCATTGTCGAGCTGTTCCAGTAA
Gene	>Ani_SJS72_1\|g10429.t1 ATGTTGTTCAGATTTGAGATTACTCTCGGCCCTGCTGAGCTGAGCTTTGTGCTTGTCTTTCTCGCGTTTTTCGGT ATTCTGCGGCTGTTTTTGTTTGCTTTGTGCTTCCTGTGTACCTTTTATCTCATCGAAAAGTATGCTTCCAGTGTG AAAGACTGGATTAAGAGTATGGAACCGAAGGCTACCGAGTTGGTAGCAACTTTGAAAAACCTGAACCTGGCCATA GATGCCAAGGTCAGCTTCTTAAATTCTGTTAAGTCAGACATCAAGCAGAAGAATGTTTCAGAGGGCGCAATTCCA CCGATCTTTGAATCGTTGCGTCTGTCAATTGCCTCTTCTCACTCCACACTTCTGTCTGCTGGTTTCTCCACCTTG GGTCACTTTTTGAAGCGACTGTTCATTCAAGAACAGCATAGTATAGTTGCTTCGCAGGCTCGCCACCTTTACCCG TTGCTCCTGGAACGCCTGGGCGATCACAAGGAGCGAGTCAGAGCACAGGCGGCCCAAGCGTTCACTGACTTTTGG CCTGCAGCTAGCCATGAAGTTGAACAACATGTCCTGGGAACGGCCCTTGTCGGCAAAAACAACAGAGCTAGGGAA ATGAGCATGATCTGGCTAGCTAATGTAAGTCTCACTCCTATCGATCCTGAGCAAAGCTGACCGAACTCCACTGGC AGATGGCTAAGCAGTATGGCTTGCTCTTCCGTCCGTATGTCCCTAGTCTTGTGGCATGTCTCGAGGACGCCGATA GTGCCGTCAGAGATACAGCCAAGGCGACCATTGTCGAGCTGTTCCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail