© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10386.t1 |
| Gene name | |
| Location | scaffold_137:12985..15935 |
| Strand | + |
| Gene length (bp) | 2950 |
| Transcript length (bp) | 2889 |
| Coding sequence length (bp) | 2889 |
| Protein length (aa) | 963 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 1.2E-09 | 909 | 954 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 127 | 149 | 22 |
| 2 | 170 | 187 | 17 |
| 3 | 386 | 408 | 22 |
| 4 | 428 | 450 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 8811 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10386.t1 MSILPSAASAATASLTAAQSLNTTSSIAAHSSLSSSSRELLSLPFRGLYQAEAFTFSTVPKQIAKLVGLQDMATR FWGAAPGTGLEPEAVLATQTAAEAVRDGVVDAAAQADSSLHFSDILQAVMKFSGFFSYLTSRWSLTCFTVALILN RITIYASTRRHLNLDWTRRLALRIVPIVLFITQIYALLRSIRCQTSPEYSTIRYGTPGKRLLFDHSGGGGFLHSL SSTLLPWETDEQSCSAVHMGRPVNASDISYGSFRLLWPVFIRLCLSHFVETVSCALQGRAVVTEAGMSIFEHSLA FAEAESVISQTLGLGIFGLSKQSSSKDIAGEGGQSTLHILTRAQALERMNVTPELLLIAMISCCNSLTSNVLDVI GRQSRYRLVNTAFWGLCFMSAMAWGLFGSSAVGSDNVVLKFPTVCIVGFVPHLLILLGIIACVFIYAFALIITAF SLPTQTSGPLSLRERFSLAHENMQGASQIQNIRLNWHEDFYSTLLRIGYTALTAASEAVFLNEGRRVSARRMTWL EQDRLAEIESHRKQSSWNLRSDPSGDMCSENGELDFDIPESTVEWESGYSREKKIEKPKPGSRPVRPQNDAGGVG TFRGVVRCYHGFAFFRGIFYLVLKWISYGLDKLLSRMGITARPQWLKSAVGSPKDSQKKRKGNRMDTLDFWILTD DGVLEMPDDHEFDVEREMRKRERNQAAGWEESDERRLDEKLYGWWKVGGSWGNQDQTSDYTPSVGDWEDTTSVIS MSTTADSEWEGYESDGRRTPTQEDPFPGRFSRESTPAHEPLVDIGALARLLDPRDQESRHEARILSAHLAAGREG RIMTRRQFQKHVERDRAQILLSSRLARPSTYESTNGKRKPTSEEEAELLENLILSRRAEMSSARSTDEQTWESGA SGLGPSGPPCVICQTNPRSIITWPCRCLCICEDCRVSLAMNNFGNCVTCRQDVAGYVRLWVP* |
| Coding | >Ani_SJS72_1|g10386.t1 ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCCTGAACACCACTTCA TCGATCGCCGCCCATTCCTCATTGTCCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAGATATGGCGACACGA TTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCCTCCAGGCAGTCATG AAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGCTCTCATATTGAAC AGGATTACCATATATGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTT CCCATTGTCCTCTTTATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCT ACGATACGCTATGGTACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTA AGCTCCACCCTTTTGCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCC TCGGACATATCATATGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAG ACCGTGTCTTGCGCTTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCA TTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCT AAAGATATCGCTGGGGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAAT GTCACCCCCGAGTTATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACGTTCTAGATGTCATT GGCAGACAAAGTCGTTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGC TTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGTGGTTCTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTT CCGCACCTTCTAATCCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTT TCGCTACCTACGCAGACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATGAGAATATGCAGGGC GCCAGCCAGATTCAGAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACG GCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTA GAACAGGACAGGCTGGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGG GATATGTGCTCTGAGAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCG CGCGAAAAGAAGATCGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGT ACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGG ATTTCTTACGGTTTGGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTA GGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTTGGATTTTGACAGAT GATGGAGTTTTAGAGATGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAG GCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCC TGGGGCAATCAGGACCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCG ATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCC TTTCCAGGTCGTTTCTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTG CTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGT CGGATAATGACCCGTCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTG GCACGGCCTTCCACATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAA AACCTCATCCTTTCGCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCC TCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCATCACCTGGCCATGT CGGTGTCTCTGTATTTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGC CAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCCATAA |
| Transcript | >Ani_SJS72_1|g10386.t1 ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCCTGAACACCACTTCA TCGATCGCCGCCCATTCCTCATTGTCCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAGATATGGCGACACGA TTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCCTCCAGGCAGTCATG AAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGCTCTCATATTGAAC AGGATTACCATATATGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTT CCCATTGTCCTCTTTATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCT ACGATACGCTATGGTACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTA AGCTCCACCCTTTTGCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCC TCGGACATATCATATGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAG ACCGTGTCTTGCGCTTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCA TTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCT AAAGATATCGCTGGGGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAAT GTCACCCCCGAGTTATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACGTTCTAGATGTCATT GGCAGACAAAGTCGTTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGC TTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGTGGTTCTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTT CCGCACCTTCTAATCCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTT TCGCTACCTACGCAGACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATGAGAATATGCAGGGC GCCAGCCAGATTCAGAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACG GCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTA GAACAGGACAGGCTGGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGG GATATGTGCTCTGAGAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCG CGCGAAAAGAAGATCGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGT ACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGG ATTTCTTACGGTTTGGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTA GGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTTGGATTTTGACAGAT GATGGAGTTTTAGAGATGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAG GCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCC TGGGGCAATCAGGACCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCG ATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCC TTTCCAGGTCGTTTCTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTG CTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGT CGGATAATGACCCGTCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTG GCACGGCCTTCCACATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAA AACCTCATCCTTTCGCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCC TCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCATCACCTGGCCATGT CGGTGTCTCTGTATTTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGC CAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCCATAA |
| Gene | >Ani_SJS72_1|g10386.t1 ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCCTGAACACCACTTCA TCGATCGCCGCCCATTCCTCATTGTCCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAGATATGGCGACACGA TTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCCTCCAGGCAGTCATG AAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGTAAATACCCACTGG CCCCGGCTAGTCGTTGTTGTGAAAATGGTCAGGCTAACCTATCAAGGCTCTCATATTGAACAGGATTACCATATA TGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTTCCCATTGTCCTCTT TATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCTACGATACGCTATGG TACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTAAGCTCCACCCTTTT GCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCCTCGGACATATCATA TGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAGACCGTGTCTTGCGC TTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCATTTGCAGAGGCGGA ATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCTAAAGATATCGCTGG GGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAATGTCACCCCCGAGTT ATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACGTTCTAGATGTCATTGGCAGACAAAGTCG TTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGCTTGTTCGGTAGTTC GGCAGTTGGAAGCGACAATGTGGTTCTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTTCCGCACCTTCTAAT CCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTTTCGCTACCTACGCA GACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATGAGAATATGCAGGGCGCCAGCCAGATTCA GAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACGGCTTTAACGGCTGC TAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTAGAACAGGACAGGCT GGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGGGATATGTGCTCTGA GAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCGCGCGAAAAGAAGAT CGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGTACCTTCAGGGGCGT GGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGGATTTCTTACGGTTT GGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTAGGGTCACCAAAGGA CTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTTGGATTTTGACAGATGATGGAGTTTTAGA GATGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAGGCCGCTGGCTGGGA GGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCCTGGGGCAATCAGGA CCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCGATGTCGACAACGGC CGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCCTTTCCAGGTCGTTT CTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTGCTGGATCCTCGCGA TCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGTCGGATAATGACCCG TCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTGGCACGGCCTTCCAC ATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAAAACCTCATCCTTTC GCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCCTCGGGTCTTGGTCC TAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCATCACCTGGCCATGTCGGTGTCTCTGTAT TTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGCCAGGACGTTGCAGG CTATGTCCGGCTATGGGTCCCATAA |