© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g1032.t1 |
| Gene name | |
| Location | scaffold_004:696513..696993 |
| Strand | + |
| Gene length (bp) | 480 |
| Transcript length (bp) | 480 |
| Coding sequence length (bp) | 480 |
| Protein length (aa) | 160 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01040 | UbiA | UbiA prenyltransferase family | 8.3E-13 | 4 | 121 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003824 | catalytic activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 34 | 19 |
| 2 | 65 | 84 | 19 |
| 3 | 89 | 111 | 22 |
| 4 | 118 | 140 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1032.t1 MGFPALGIDLLNNGAALEAAAALYASCVTWTVLYDMIYAHMDIKDDVAAGIKSIALRHEKNTKAVLSALAAVQVP LLAAAGVAAGSGPIFFIGSCGSAAVSLGLMIWKVQLKNVQNCWWWFKNGCLLTGGGITLGMLLDYVAQTTGFYKP VEEPVSLES* |
| Coding | >Ani_SJS72_1|g1032.t1 ATGGGCTTCCCTGCGCTGGGCATCGATCTTCTCAATAATGGCGCCGCACTGGAAGCTGCTGCTGCGCTTTACGCC AGTTGTGTGACCTGGACGGTTCTGTATGACATGATATACGCGCATATGGACATTAAAGATGACGTTGCGGCTGGC ATTAAGTCTATTGCTCTTCGTCACGAAAAGAACACAAAAGCTGTGCTTTCAGCTCTCGCCGCCGTACAGGTGCCG TTACTCGCCGCTGCAGGTGTAGCAGCAGGAAGCGGGCCTATCTTCTTCATCGGCAGTTGTGGCAGTGCGGCTGTC TCCCTCGGTCTCATGATCTGGAAAGTCCAATTAAAAAATGTACAAAATTGCTGGTGGTGGTTCAAGAACGGTTGC TTGCTCACCGGTGGAGGTATTACCCTGGGAATGCTCCTTGATTATGTCGCGCAAACCACAGGGTTTTATAAACCG GTTGAGGAGCCGGTTTCCCTTGAGAGCTGA |
| Transcript | >Ani_SJS72_1|g1032.t1 ATGGGCTTCCCTGCGCTGGGCATCGATCTTCTCAATAATGGCGCCGCACTGGAAGCTGCTGCTGCGCTTTACGCC AGTTGTGTGACCTGGACGGTTCTGTATGACATGATATACGCGCATATGGACATTAAAGATGACGTTGCGGCTGGC ATTAAGTCTATTGCTCTTCGTCACGAAAAGAACACAAAAGCTGTGCTTTCAGCTCTCGCCGCCGTACAGGTGCCG TTACTCGCCGCTGCAGGTGTAGCAGCAGGAAGCGGGCCTATCTTCTTCATCGGCAGTTGTGGCAGTGCGGCTGTC TCCCTCGGTCTCATGATCTGGAAAGTCCAATTAAAAAATGTACAAAATTGCTGGTGGTGGTTCAAGAACGGTTGC TTGCTCACCGGTGGAGGTATTACCCTGGGAATGCTCCTTGATTATGTCGCGCAAACCACAGGGTTTTATAAACCG GTTGAGGAGCCGGTTTCCCTTGAGAGCTGA |
| Gene | >Ani_SJS72_1|g1032.t1 ATGGGCTTCCCTGCGCTGGGCATCGATCTTCTCAATAATGGCGCCGCACTGGAAGCTGCTGCTGCGCTTTACGCC AGTTGTGTGACCTGGACGGTTCTGTATGACATGATATACGCGCATATGGACATTAAAGATGACGTTGCGGCTGGC ATTAAGTCTATTGCTCTTCGTCACGAAAAGAACACAAAAGCTGTGCTTTCAGCTCTCGCCGCCGTACAGGTGCCG TTACTCGCCGCTGCAGGTGTAGCAGCAGGAAGCGGGCCTATCTTCTTCATCGGCAGTTGTGGCAGTGCGGCTGTC TCCCTCGGTCTCATGATCTGGAAAGTCCAATTAAAAAATGTACAAAATTGCTGGTGGTGGTTCAAGAACGGTTGC TTGCTCACCGGTGGAGGTATTACCCTGGGAATGCTCCTTGATTATGTCGCGCAAACCACAGGGTTTTATAAACCG GTTGAGGAGCCGGTTTCCCTTGAGAGCTGA |