© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10190.t1 |
| Gene name | |
| Location | scaffold_128:33866..36128 |
| Strand | - |
| Gene length (bp) | 2262 |
| Transcript length (bp) | 1782 |
| Coding sequence length (bp) | 1782 |
| Protein length (aa) | 594 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 4.7E-38 | 20 | 412 |
| PF13520 | AA_permease_2 | Amino acid permease | 2.5E-27 | 18 | 492 |
| PF03845 | Spore_permease | Spore germination protein | 8.9E-09 | 18 | 249 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0009847 | spore germination | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0048869 | cellular developmental process | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| GO:0032502 | developmental process | No |
| GO:0030154 | cell differentiation | No |
| GO:0009987 | cellular process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 34 | 19 |
| 2 | 41 | 63 | 22 |
| 3 | 101 | 123 | 22 |
| 4 | 130 | 152 | 22 |
| 5 | 157 | 176 | 19 |
| 6 | 231 | 253 | 22 |
| 7 | 300 | 322 | 22 |
| 8 | 357 | 379 | 22 |
| 9 | 394 | 416 | 22 |
| 10 | 443 | 465 | 22 |
| 11 | 475 | 497 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 9141 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10190.t1 MTTQVDTSEKLKQELFGFQIFFITLSVVIGSGIFTNNGMALAIAGPMGLIVAVLIISIVILAVNECIAELTQQFP VYNSIVEYVRTFVDEDLGWVIGLAYWYAYAATFASQTSMAATLLEYWGLPTAWRVLICYVFVPAILFLLNMTGVF WYGVVETIGGFLKLVMIVAISIYLYTIADNVSSPSFEHGQSYSSNGQAQCYAIPLTAYAFQGIEVYAMTAYEARD GHALRWPARWTAYAAVVVYIMCTLGEVINVKWNDSALPQLHDGVSNSTLSATSNPGSSSSMIIIAALNANNRSMA GFLNGCLLFSVFSAANTSLYVASRTLWGMAKHFPASSKGQEVWIKRKLAILSEGTKVPVVSLLVSLLAFCWVPFL QLAHSSAVQQVVQVISISSSTAIMIVWAAICLAFLRYYYWLKKCEPRLRYHDRPQYIRLHEKYTPRGSLLILQPL QAWIGLIGCITIFAFSSATWWNEDATVTEVAMAYGPHMVLLLIFIISKVFSKNKGWVKLTNDEWVLRKALDRLWV RKIDHHEETATKRLRSVMASLLPQPWVKLINGQNNQQANENVHHRSESSTSVETNSQELLTISNDQPV* |
| Coding | >Ani_SJS72_1|g10190.t1 ATGACGACTCAAGTGGACACTTCAGAGAAGCTTAAACAGGAGCTCTTTGGGTTTCAGATCTTTTTCATCACGCTC AGTGTTGTCATCGGAAGTGGCATTTTCACCAACAATGGAATGGCCCTCGCCATTGCGGGGCCCATGGGCTTGATT GTTGCGGTCCTCATCATCAGCATAGTGATTCTAGCAGTTAACGAATGTATTGCGGAGTTGACTCAGCAATTTCCG GTCTACAATTCGATCGTTGAATATGTTCGCACATTCGTCGACGAGGATCTTGGCTGGGTTATCGGACTGGCTTAT TGGTATGCATATGCCGCAACATTTGCCAGCCAAACCTCTATGGCTGCGACTCTCCTAGAGTATTGGGGCCTGCCA ACTGCGTGGAGAGTTCTTATCTGCTATGTTTTTGTTCCAGCCATTCTTTTTCTTCTCAACATGACTGGAGTTTTT TGGTACGGTGTCGTGGAAACCATTGGTGGTTTCCTAAAGCTGGTGATGATCGTGGCAATCTCGATCTATCTCTAC ACAATTGCGGACAATGTCTCTTCGCCCAGCTTTGAACATGGACAAAGTTATAGCAGTAATGGCCAAGCCCAGTGC TATGCTATTCCGCTCACGGCATACGCTTTCCAGGGCATCGAAGTATACGCCATGACTGCGTATGAAGCTCGAGAC GGTCATGCACTTCGTTGGCCGGCTCGTTGGACTGCGTACGCGGCGGTAGTCGTGTACATCATGTGCACGTTGGGG GAGGTTATCAACGTGAAGTGGAATGACTCTGCCCTACCGCAGCTCCATGATGGAGTTTCAAACAGCACGTTATCG GCTACTTCCAACCCTGGTTCGTCGAGTAGCATGATCATAATAGCGGCGCTGAATGCCAATAACCGGTCAATGGCT GGATTCCTCAACGGTTGTTTACTCTTCAGTGTCTTTTCTGCCGCTAACACTTCACTGTACGTTGCTTCCCGAACC TTATGGGGTATGGCCAAGCACTTTCCCGCATCTTCCAAGGGTCAAGAAGTATGGATCAAGAGGAAGCTAGCGATT CTAAGTGAGGGCACCAAGGTTCCAGTTGTATCCTTGCTGGTGTCACTGCTAGCATTCTGCTGGGTCCCGTTTCTA CAGCTCGCGCATAGCTCTGCAGTACAGCAGGTGGTCCAAGTTATATCTATCTCGTCCAGCACCGCTATAATGATC GTATGGGCAGCTATCTGTCTCGCCTTCCTTCGCTACTATTATTGGCTGAAAAAATGCGAACCCCGACTTCGGTAC CACGACCGTCCTCAATACATCCGACTGCATGAAAAATACACTCCTAGGGGCAGTCTTCTTATTCTCCAACCACTT CAGGCCTGGATAGGACTAATTGGGTGTATCACCATTTTTGCATTTTCCAGCGCGACATGGTGGAATGAAGACGCA ACCGTCACCGAAGTTGCCATGGCGTACGGGCCGCATATGGTCCTCTTACTCATTTTCATAATCTCGAAAGTGTTC AGTAAAAACAAGGGGTGGGTCAAATTGACAAACGACGAGTGGGTCCTGCGGAAAGCTTTGGATAGACTATGGGTT CGCAAGATCGATCATCATGAGGAAACCGCCACAAAGCGCCTGCGCAGTGTTATGGCTTCGCTGCTTCCACAGCCT TGGGTAAAACTCATTAATGGGCAGAACAACCAGCAAGCGAATGAGAACGTTCATCATCGGAGTGAGAGTTCCACG TCTGTGGAGACAAACAGTCAAGAGTTGCTTACTATATCGAATGACCAGCCTGTATGA |
| Transcript | >Ani_SJS72_1|g10190.t1 ATGACGACTCAAGTGGACACTTCAGAGAAGCTTAAACAGGAGCTCTTTGGGTTTCAGATCTTTTTCATCACGCTC AGTGTTGTCATCGGAAGTGGCATTTTCACCAACAATGGAATGGCCCTCGCCATTGCGGGGCCCATGGGCTTGATT GTTGCGGTCCTCATCATCAGCATAGTGATTCTAGCAGTTAACGAATGTATTGCGGAGTTGACTCAGCAATTTCCG GTCTACAATTCGATCGTTGAATATGTTCGCACATTCGTCGACGAGGATCTTGGCTGGGTTATCGGACTGGCTTAT TGGTATGCATATGCCGCAACATTTGCCAGCCAAACCTCTATGGCTGCGACTCTCCTAGAGTATTGGGGCCTGCCA ACTGCGTGGAGAGTTCTTATCTGCTATGTTTTTGTTCCAGCCATTCTTTTTCTTCTCAACATGACTGGAGTTTTT TGGTACGGTGTCGTGGAAACCATTGGTGGTTTCCTAAAGCTGGTGATGATCGTGGCAATCTCGATCTATCTCTAC ACAATTGCGGACAATGTCTCTTCGCCCAGCTTTGAACATGGACAAAGTTATAGCAGTAATGGCCAAGCCCAGTGC TATGCTATTCCGCTCACGGCATACGCTTTCCAGGGCATCGAAGTATACGCCATGACTGCGTATGAAGCTCGAGAC GGTCATGCACTTCGTTGGCCGGCTCGTTGGACTGCGTACGCGGCGGTAGTCGTGTACATCATGTGCACGTTGGGG GAGGTTATCAACGTGAAGTGGAATGACTCTGCCCTACCGCAGCTCCATGATGGAGTTTCAAACAGCACGTTATCG GCTACTTCCAACCCTGGTTCGTCGAGTAGCATGATCATAATAGCGGCGCTGAATGCCAATAACCGGTCAATGGCT GGATTCCTCAACGGTTGTTTACTCTTCAGTGTCTTTTCTGCCGCTAACACTTCACTGTACGTTGCTTCCCGAACC TTATGGGGTATGGCCAAGCACTTTCCCGCATCTTCCAAGGGTCAAGAAGTATGGATCAAGAGGAAGCTAGCGATT CTAAGTGAGGGCACCAAGGTTCCAGTTGTATCCTTGCTGGTGTCACTGCTAGCATTCTGCTGGGTCCCGTTTCTA CAGCTCGCGCATAGCTCTGCAGTACAGCAGGTGGTCCAAGTTATATCTATCTCGTCCAGCACCGCTATAATGATC GTATGGGCAGCTATCTGTCTCGCCTTCCTTCGCTACTATTATTGGCTGAAAAAATGCGAACCCCGACTTCGGTAC CACGACCGTCCTCAATACATCCGACTGCATGAAAAATACACTCCTAGGGGCAGTCTTCTTATTCTCCAACCACTT CAGGCCTGGATAGGACTAATTGGGTGTATCACCATTTTTGCATTTTCCAGCGCGACATGGTGGAATGAAGACGCA ACCGTCACCGAAGTTGCCATGGCGTACGGGCCGCATATGGTCCTCTTACTCATTTTCATAATCTCGAAAGTGTTC AGTAAAAACAAGGGGTGGGTCAAATTGACAAACGACGAGTGGGTCCTGCGGAAAGCTTTGGATAGACTATGGGTT CGCAAGATCGATCATCATGAGGAAACCGCCACAAAGCGCCTGCGCAGTGTTATGGCTTCGCTGCTTCCACAGCCT TGGGTAAAACTCATTAATGGGCAGAACAACCAGCAAGCGAATGAGAACGTTCATCATCGGAGTGAGAGTTCCACG TCTGTGGAGACAAACAGTCAAGAGTTGCTTACTATATCGAATGACCAGCCTGTATGA |
| Gene | >Ani_SJS72_1|g10190.t1 ATGACGACTCAAGTGGACACTTCAGAGAAGCTTAAGTATGTAAAAATTCCGAAACTTTGACAATATGCTGACGGG TGTAGACAGGAGCTCTTTGGGTTTCAGATCTTTGTATGCATGATGCCTCAGTTGGCTTGGTCGTTGCTAACGTGG CCCAGTTCATCACGCTCAGTGTTGTCATCGGAAGTGGCATTTTCACCAACAATGGAATGGCCCTCGCCATTGCGG GGCCCATGGGCTTGATTGTTGCGGTCCTCATCATCAGCATAGTGATTCTAGCAGTTAACGAATGTATTGCGGAGT TGACTCAGCAATTTCCGGTCTACAATTCGATCGTTGAATATGTTCGCACATTCGTCGACGAGGATCTTGGCTGGG TTATCGGACTGGCTTATTGGTAATAGCTTTCGATTCGGCACAAAGCACCATTTGCAGCTAATAGGGAAATAGGTA TGCATATGCCGCAACATTTGCCAGCCAAACCTCTATGGCTGCGACTCTCCTAGAGTATTGGGGCCTGCCAACTGC GTGGAGAGTTCTTATCTGCTATGTTTTTGTTCCAGCCATTCTTTTTCTTCTCAACATGACTGGAGTTTTTGTGGG TTGTCTCGTCGCATTGATGGATACATGGCTAATAGAATCTCAGTGGTACGGTGTCGTGGAAACCATTGGTGGTTT CCTAAAGCTGGTGATGATCGTGGCAATCTCGATCTATCTCTACACAATTGCGGACAATGGTGAGTGGCAGTCCCA GATTGCACAATTATATAATCGTTACTATTATTGAGTTACCAGCATAAACTTACCTATTGCAGTCTCTTCGCCCAG CTTTGAACATGGACAAAGTTATAGCAGTAATGGCCAAGCCCAGTGGTCAGCTCGCCACTCCCTCATCTATTAATC TGGCATGCTAACATGATATCAGCTATGCTATTCCGCTCACGGCATACGCTTTCCAGGGCATCGAAGTATACGCCA TGACTGCGTATGAAGCTCGAGACGGTCATGCACTTCGTTGGCCGGCTCGTTGGACTGCGTACGCGGCGGTAGTCG TGTACATCATGTGCACGTTGGGGGAGGTTATCAACGTGAAGTGGAATGACTCTGCCCTACCGCAGCTCCATGATG GAGTTTCAAACAGCACGTTATCGGCTACTTCCAACCCTGGTTCGTCGAGTAGCATGATCATAATAGCGGCGCTGA ATGCCAATAACCGGTCAATGGCTGGATTCCTCAACGGTTGTTTACTCTTCAGTGTCTTTTCTGCCGCTAACACTT CACTGTACGTTGCTTCCCGAACCTTATGGGGTATGGCCAAGCACTTTCCCGCATCTTCCAAGGGTCAAGAAGTAT GGATCAAGAGGAAGCTAGCGATTCTAAGTGAGGGCACCAAGGTTCCAGTTGTATCCTTGCTGGTGTCACTGCTAG CATTCTGCTGGGTCCCGTTTCTACAGCTCGCGCATAGCTCTGCAGTACAGCAGGTGTGTAGGTGTGATACATTTG CTCTGTTTATCTGCTAATGGAGGCAGGTGGTCCAAGTTATATCTATCTCGTCCAGCACCGCTATAATGATCGTAT GGGCAGCTATCTGTCTCGCCTTCCTTCGCTACTATTATTGGTTCGTGTGTCTGCTCAATATGCAACTAGTGTTGA GGTACTCATTGCTGGCGCAGGCTGAAAAAATGCGAACCCCGACTTCGGTACCACGACCGTCCTCAATACATCCGA CTGCATGAAAAATACACTCCTAGGGGCAGTCTTCTTATTCTCCAACCACTTCAGGCCTGGATAGGACTAATTGGG TGTATCACCATTTTTGCATTTTCCAGCGCGACATGGTGGAATGAAGACGCAACCGTCACCGAAGTTGCCATGGCG TACGGGCCGGTAAGCCAGCGCAACAGCTAAGCACATCTACTCATTCTAATCAAGTTCCGATAGCATATGGTCCTC TTACTCATTTTCATAATCTCGAAAGTGTTCAGTAAAAACAAGGGGTGGGTCAAATTGACAAACGACGAGTGGGTC CTGCGGAAAGCTTTGGATAGACTATGGGTTCGCAAGATCGATCATCATGAGGAAACCGCCACAAAGCGCCTGCGC AGTGTTATGGCTTCGCTGCTTCCACAGCCTTGGGTAAAACTCATTAATGGGCAGAACAACCAGCAAGCGAATGAG AACGTTCATCATCGGAGTGAGAGTTCCACGTCTGTGGAGACAAACAGTCAAGAGTTGCTTACTATATCGAATGAC CAGCCTGTATGA |