Protein ID | Ani_SJS72_1|g10177.t1 |
Gene name | |
Location | scaffold_127:70240..71915 |
Strand | + |
Gene length (bp) | 1675 |
Transcript length (bp) | 1620 |
Coding sequence length (bp) | 1620 |
Protein length (aa) | 540 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00487 | FA_desaturase | Fatty acid desaturase | 9.4E-25 | 226 | 498 |
PF00173 | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | 2.9E-11 | 24 | 81 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006629 | lipid metabolic process | Yes |
GO:0044238 | primary metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 217 | 239 | 22 |
2 | 254 | 276 | 22 |
3 | 336 | 358 | 22 |
4 | 373 | 395 | 22 |
5 | 402 | 421 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g10177.t1 MAQSRKDQILSSREIEGLIAAGQSIVIVDQKVLRVDSWIPYHPGGHKTIQHMVGKDATDEFTVFHSEETIKMADR YQIGRVEGRWRNFVPPIQGGQFRPYPDKEAPPNTKQNAHSSSVTDENSPNDNEDGRLNPVHQAATELNTKEAMTF LDSQTKEEISLTLTRYPSLDEATQGDIIKKYQRLHDQIQAEGLYNCNYIAYAKEFARCSLIFSTMLLFLHYGWYC TSAIFLGFFWSQLVFSAHDAAHIAITHNFTIDSLIGMIIAAPIGGLSLGWWKRTHNVHHIVTNAPEHDPDNQHLP FFAVNHRFLGNLFSSYHERLMPYTRAASRLVAYQAYLYYPVLMFGRFNLYVQSWIFLIQGQGPRKGPAWWHRHFE IVGNLLFWLWFGYGLVYRSIPTAWDRFLFVMISHMVTMPLHVQFTLSHFAMSTMDLGPSESFAQRMLRTTMDIDC PEWLDFIHGGLQFQAIHHLFPRVPRHNLRRTQKLVLEFCRDVGIPYALYGFVDGNQKVVGSLAEVSRQAAILAKC QRTIAERGDLLYGR* |
Coding | >Ani_SJS72_1|g10177.t1 ATGGCCCAGTCCCGAAAAGACCAGATCCTCTCATCCCGAGAAATCGAGGGCCTGATTGCTGCAGGACAATCCATT GTGATTGTCGATCAGAAAGTGCTACGTGTCGATTCATGGATCCCTTACCATCCGGGAGGTCACAAAACCATCCAA CACATGGTCGGCAAGGACGCAACAGATGAATTCACCGTATTCCACTCAGAGGAGACTATCAAAATGGCCGATCGG TACCAGATCGGCCGGGTTGAGGGGCGATGGCGGAACTTTGTGCCTCCCATCCAGGGTGGACAGTTCAGACCGTAT CCGGACAAGGAGGCACCTCCCAACACCAAGCAAAATGCACACAGTTCATCTGTTACGGACGAGAACTCACCGAAC GACAATGAAGACGGCCGCCTCAATCCAGTGCACCAAGCGGCAACCGAGCTCAACACCAAAGAAGCAATGACCTTT CTAGACAGTCAAACCAAGGAAGAAATCAGCCTCACCCTAACCCGCTACCCATCCCTTGACGAAGCAACCCAAGGC GACATCATAAAGAAGTACCAACGTCTCCACGACCAAATCCAAGCCGAGGGCCTCTACAATTGCAACTACATAGCC TACGCCAAAGAATTCGCACGCTGCTCACTAATCTTCAGCACCATGCTTCTCTTCCTCCACTACGGCTGGTATTGC ACCAGCGCCATCTTCCTCGGCTTCTTCTGGTCTCAACTTGTATTCTCCGCCCACGACGCTGCCCACATAGCCATC ACCCACAACTTCACCATCGACAGCCTCATCGGCATGATAATCGCCGCCCCCATCGGCGGCCTCTCCTTGGGCTGG TGGAAACGCACCCACAACGTCCACCACATCGTAACGAACGCCCCCGAACACGACCCAGACAACCAACACCTCCCC TTCTTCGCCGTCAACCACCGCTTCCTCGGAAACCTCTTCTCCAGCTACCACGAGCGCCTCATGCCCTACACACGC GCAGCCAGCCGTCTCGTCGCCTACCAGGCCTACCTCTACTACCCCGTCCTCATGTTCGGCCGCTTCAACCTCTAT GTCCAGTCCTGGATCTTCCTCATCCAGGGCCAAGGGCCCCGCAAAGGCCCAGCCTGGTGGCACCGCCACTTCGAA ATCGTCGGCAACCTTCTTTTCTGGCTCTGGTTCGGCTACGGCCTCGTATACCGCAGTATCCCAACAGCCTGGGAT CGCTTCCTCTTCGTCATGATAAGCCATATGGTCACCATGCCGCTGCATGTGCAATTCACCCTATCCCACTTCGCC ATGTCAACGATGGACCTCGGACCCAGTGAATCCTTCGCCCAGCGCATGCTCCGCACAACCATGGACATTGATTGT CCCGAGTGGTTGGATTTCATCCACGGCGGGTTGCAGTTCCAGGCGATTCATCATCTGTTCCCCCGTGTCCCGAGA CATAATCTGAGGAGGACACAGAAGCTCGTGCTGGAGTTCTGTCGGGATGTGGGCATTCCGTACGCGCTTTATGGG TTCGTTGATGGGAATCAGAAAGTCGTGGGCAGTTTGGCGGAGGTCAGCCGTCAGGCTGCGATTTTGGCCAAGTGT CAGAGGACGATTGCGGAACGGGGGGATTTGCTGTATGGGAGGTGA |
Transcript | >Ani_SJS72_1|g10177.t1 ATGGCCCAGTCCCGAAAAGACCAGATCCTCTCATCCCGAGAAATCGAGGGCCTGATTGCTGCAGGACAATCCATT GTGATTGTCGATCAGAAAGTGCTACGTGTCGATTCATGGATCCCTTACCATCCGGGAGGTCACAAAACCATCCAA CACATGGTCGGCAAGGACGCAACAGATGAATTCACCGTATTCCACTCAGAGGAGACTATCAAAATGGCCGATCGG TACCAGATCGGCCGGGTTGAGGGGCGATGGCGGAACTTTGTGCCTCCCATCCAGGGTGGACAGTTCAGACCGTAT CCGGACAAGGAGGCACCTCCCAACACCAAGCAAAATGCACACAGTTCATCTGTTACGGACGAGAACTCACCGAAC GACAATGAAGACGGCCGCCTCAATCCAGTGCACCAAGCGGCAACCGAGCTCAACACCAAAGAAGCAATGACCTTT CTAGACAGTCAAACCAAGGAAGAAATCAGCCTCACCCTAACCCGCTACCCATCCCTTGACGAAGCAACCCAAGGC GACATCATAAAGAAGTACCAACGTCTCCACGACCAAATCCAAGCCGAGGGCCTCTACAATTGCAACTACATAGCC TACGCCAAAGAATTCGCACGCTGCTCACTAATCTTCAGCACCATGCTTCTCTTCCTCCACTACGGCTGGTATTGC ACCAGCGCCATCTTCCTCGGCTTCTTCTGGTCTCAACTTGTATTCTCCGCCCACGACGCTGCCCACATAGCCATC ACCCACAACTTCACCATCGACAGCCTCATCGGCATGATAATCGCCGCCCCCATCGGCGGCCTCTCCTTGGGCTGG TGGAAACGCACCCACAACGTCCACCACATCGTAACGAACGCCCCCGAACACGACCCAGACAACCAACACCTCCCC TTCTTCGCCGTCAACCACCGCTTCCTCGGAAACCTCTTCTCCAGCTACCACGAGCGCCTCATGCCCTACACACGC GCAGCCAGCCGTCTCGTCGCCTACCAGGCCTACCTCTACTACCCCGTCCTCATGTTCGGCCGCTTCAACCTCTAT GTCCAGTCCTGGATCTTCCTCATCCAGGGCCAAGGGCCCCGCAAAGGCCCAGCCTGGTGGCACCGCCACTTCGAA ATCGTCGGCAACCTTCTTTTCTGGCTCTGGTTCGGCTACGGCCTCGTATACCGCAGTATCCCAACAGCCTGGGAT CGCTTCCTCTTCGTCATGATAAGCCATATGGTCACCATGCCGCTGCATGTGCAATTCACCCTATCCCACTTCGCC ATGTCAACGATGGACCTCGGACCCAGTGAATCCTTCGCCCAGCGCATGCTCCGCACAACCATGGACATTGATTGT CCCGAGTGGTTGGATTTCATCCACGGCGGGTTGCAGTTCCAGGCGATTCATCATCTGTTCCCCCGTGTCCCGAGA CATAATCTGAGGAGGACACAGAAGCTCGTGCTGGAGTTCTGTCGGGATGTGGGCATTCCGTACGCGCTTTATGGG TTCGTTGATGGGAATCAGAAAGTCGTGGGCAGTTTGGCGGAGGTCAGCCGTCAGGCTGCGATTTTGGCCAAGTGT CAGAGGACGATTGCGGAACGGGGGGATTTGCTGTATGGGAGGTGA |
Gene | >Ani_SJS72_1|g10177.t1 ATGGCCCAGTCCCGAAAAGACCAGATCCTCTCATCCCGAGAAATCGAGGGCCTGATTGCTGCAGGACAATCCATT GTGATTGTCGATCAGAAAGTGCTACGTGTCGATTCATGGATCCCTTACCATCCGGGAGGTCACAAAACCATCCAA CACATGGTCGGCAAGGACGCAACAGATGAATTCACCGTGTATGCATATGTTTAGTGACTTGGAAAAGGTAGCTCA AACTAACTTGTGGGGCAGATTCCACTCAGAGGAGACTATCAAAATGGCCGATCGGTACCAGATCGGCCGGGTTGA GGGGCGATGGCGGAACTTTGTGCCTCCCATCCAGGGTGGACAGTTCAGACCGTATCCGGACAAGGAGGCACCTCC CAACACCAAGCAAAATGCACACAGTTCATCTGTTACGGACGAGAACTCACCGAACGACAATGAAGACGGCCGCCT CAATCCAGTGCACCAAGCGGCAACCGAGCTCAACACCAAAGAAGCAATGACCTTTCTAGACAGTCAAACCAAGGA AGAAATCAGCCTCACCCTAACCCGCTACCCATCCCTTGACGAAGCAACCCAAGGCGACATCATAAAGAAGTACCA ACGTCTCCACGACCAAATCCAAGCCGAGGGCCTCTACAATTGCAACTACATAGCCTACGCCAAAGAATTCGCACG CTGCTCACTAATCTTCAGCACCATGCTTCTCTTCCTCCACTACGGCTGGTATTGCACCAGCGCCATCTTCCTCGG CTTCTTCTGGTCTCAACTTGTATTCTCCGCCCACGACGCTGCCCACATAGCCATCACCCACAACTTCACCATCGA CAGCCTCATCGGCATGATAATCGCCGCCCCCATCGGCGGCCTCTCCTTGGGCTGGTGGAAACGCACCCACAACGT CCACCACATCGTAACGAACGCCCCCGAACACGACCCAGACAACCAACACCTCCCCTTCTTCGCCGTCAACCACCG CTTCCTCGGAAACCTCTTCTCCAGCTACCACGAGCGCCTCATGCCCTACACACGCGCAGCCAGCCGTCTCGTCGC CTACCAGGCCTACCTCTACTACCCCGTCCTCATGTTCGGCCGCTTCAACCTCTATGTCCAGTCCTGGATCTTCCT CATCCAGGGCCAAGGGCCCCGCAAAGGCCCAGCCTGGTGGCACCGCCACTTCGAAATCGTCGGCAACCTTCTTTT CTGGCTCTGGTTCGGCTACGGCCTCGTATACCGCAGTATCCCAACAGCCTGGGATCGCTTCCTCTTCGTCATGAT AAGCCATATGGTCACCATGCCGCTGCATGTGCAATTCACCCTATCCCACTTCGCCATGTCAACGATGGACCTCGG ACCCAGTGAATCCTTCGCCCAGCGCATGCTCCGCACAACCATGGACATTGATTGTCCCGAGTGGTTGGATTTCAT CCACGGCGGGTTGCAGTTCCAGGCGATTCATCATCTGTTCCCCCGTGTCCCGAGACATAATCTGAGGAGGACACA GAAGCTCGTGCTGGAGTTCTGTCGGGATGTGGGCATTCCGTACGCGCTTTATGGGTTCGTTGATGGGAATCAGAA AGTCGTGGGCAGTTTGGCGGAGGTCAGCCGTCAGGCTGCGATTTTGGCCAAGTGTCAGAGGACGATTGCGGAACG GGGGGATTTGCTGTATGGGAGGTGA |