© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g10150.t1 |
| Gene name | |
| Location | scaffold_126:68064..70357 |
| Strand | + |
| Gene length (bp) | 2293 |
| Transcript length (bp) | 1896 |
| Coding sequence length (bp) | 1896 |
| Protein length (aa) | 632 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01061 | ABC2_membrane | ABC-2 type transporter | 5.9E-28 | 355 | 563 |
| PF00005 | ABC_tran | ABC transporter | 5.8E-27 | 52 | 205 |
| PF19055 | ABC2_membrane_7 | ABC-2 type transporter | 1.9E-12 | 235 | 338 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0140359 | ABC-type transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0000166 | nucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0015399 | primary active transmembrane transporter activity | No |
| GO:0043168 | anion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0005575 | cellular_component | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 371 | 393 | 22 |
| 2 | 403 | 425 | 22 |
| 3 | 446 | 468 | 22 |
| 4 | 481 | 503 | 22 |
| 5 | 510 | 532 | 22 |
| 6 | 607 | 629 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10150.t1 MDDRSSKLDGSDLERNESSSFFKNNTVNDFSWRNLTVTVKDRHTKQPRNLIDGISGSVQQGELVALMGPSGCGKT TLLNVLARRAASSGAKTTGDCYIDGKTVDNATFGRLTSYVEQEDALIGSLTVRETLKFAADLSLPSSVTKLQRKE RIQSLLQAFGIQNQASTLVGTPIRKGISGGQKRRVSVASQLMTCPKILFLDEPTSGLDSSASFEVISYVKEMAVA NNLIIIASIHQPSTTTFQLFDKLLLLSSGKTCYFGPVTDVPTYFDTIGYSLPMNTNPAEFILDLVSSDFLGSTQT MSKDQVQRIHTSWAESSNAAALTDQVSQRTMVSEKQAAKTEMDELSRPGILSITLTLLHRSFIKSYRDVVAYGIR IAMYLGLAIMMGTVWLRLHTEQSYIQPFINAIFFGSAFMSFMAVAYVPAFIEDRMTFIKERANGLYGALPFIVSN FIIGLPFLFLISLLFSIISYWLSNFNPTATSFFTWVMWLFLDLVAAESLVVFMTSIFPNFVISLALVAFANGLWM SVGGFLVTPKILNPFWKYVFHYIDYQAYVFQGMMVNEFQHRTYSCGESCQCMYQTDLASECKIRGTGVLQEYGYA TGRTGKWVGILIGIIAVYRLFAYCALVVRRT* |
| Coding | >Ani_SJS72_1|g10150.t1 ATGGATGACCGCTCATCTAAGCTCGATGGTTCTGACCTCGAGCGCAACGAAAGTTCCAGCTTCTTTAAGAATAAT ACCGTCAACGACTTTTCCTGGCGAAATCTCACCGTCACCGTCAAGGACCGCCATACTAAACAGCCCCGGAACCTG ATCGATGGAATCAGCGGGTCAGTTCAGCAAGGCGAACTAGTCGCTCTGATGGGTCCCTCGGGATGCGGCAAGACT ACACTACTTAACGTTCTGGCTCGTCGCGCAGCATCATCGGGAGCAAAGACGACTGGAGATTGCTATATAGACGGG AAGACTGTTGATAATGCGACGTTTGGCCGACTTACTTCTTACGTGGAGCAGGAGGATGCGCTGATCGGGTCGCTG ACGGTGCGCGAGACACTGAAATTCGCCGCAGATCTCTCGTTGCCCAGCTCCGTTACGAAGCTTCAACGGAAGGAG CGCATTCAGTCTCTTTTACAAGCTTTTGGAATCCAGAACCAGGCATCTACTTTGGTCGGCACGCCCATTCGCAAG GGAATCAGTGGTGGTCAGAAACGGCGTGTCAGCGTGGCAAGTCAACTCATGACGTGCCCTAAGATTCTGTTTTTG GATGAACCGACGAGCGGACTGGACTCGTCTGCTAGCTTTGAGGTCATCTCCTACGTCAAGGAGATGGCGGTTGCG AACAACCTCATCATAATTGCTAGTATTCACCAGCCGTCCACGACTACATTCCAGCTTTTCGATAAGCTGCTCCTC CTCTCGAGCGGAAAAACGTGCTACTTCGGTCCTGTGACAGATGTGCCGACCTATTTTGACACTATTGGCTACTCG CTTCCAATGAACACCAACCCAGCCGAGTTTATCCTCGATCTTGTCAGCTCCGATTTCTTAGGCAGCACACAAACC ATGTCCAAGGATCAGGTCCAGCGGATTCATACAAGCTGGGCTGAATCCTCCAATGCCGCAGCGCTGACAGACCAG GTCTCGCAGCGGACCATGGTATCCGAGAAACAAGCAGCTAAAACTGAAATGGACGAGCTAAGTCGCCCGGGTATT CTCAGCATCACTCTTACCCTCCTGCACCGCTCCTTCATCAAGAGTTACCGTGATGTTGTGGCATACGGCATCCGT ATCGCCATGTACCTGGGGCTGGCAATCATGATGGGAACCGTCTGGCTGCGTCTGCACACCGAACAGAGCTACATC CAGCCCTTTATCAACGCAATCTTCTTCGGCTCCGCCTTCATGAGCTTTATGGCAGTAGCCTACGTTCCCGCCTTT ATCGAAGACCGCATGACCTTCATCAAAGAACGCGCCAACGGACTCTACGGCGCCCTGCCCTTCATTGTCTCCAAC TTTATCATCGGCCTTCCCTTCCTCTTCCTGATCTCCCTCCTCTTCTCCATAATCTCCTACTGGCTCTCCAACTTC AACCCCACCGCCACCTCCTTCTTCACCTGGGTAATGTGGCTCTTCCTCGACCTCGTAGCCGCCGAATCCCTCGTC GTCTTCATGACCTCCATCTTCCCCAACTTCGTCATCTCCCTCGCCCTCGTCGCCTTCGCCAACGGTCTCTGGATG AGCGTCGGCGGGTTCCTCGTGACCCCCAAGATTCTCAACCCCTTTTGGAAATACGTTTTCCATTATATAGATTAT CAGGCATACGTCTTCCAAGGCATGATGGTCAACGAATTCCAGCATAGGACCTACTCTTGCGGCGAATCCTGCCAA TGCATGTATCAGACGGACTTGGCCTCCGAGTGTAAGATCCGCGGGACGGGCGTACTGCAGGAATATGGCTATGCT ACGGGCAGGACGGGTAAGTGGGTGGGGATTCTTATTGGTATTATTGCTGTGTATCGGCTTTTTGCGTATTGTGCG TTGGTGGTGAGGAGGACTTAG |
| Transcript | >Ani_SJS72_1|g10150.t1 ATGGATGACCGCTCATCTAAGCTCGATGGTTCTGACCTCGAGCGCAACGAAAGTTCCAGCTTCTTTAAGAATAAT ACCGTCAACGACTTTTCCTGGCGAAATCTCACCGTCACCGTCAAGGACCGCCATACTAAACAGCCCCGGAACCTG ATCGATGGAATCAGCGGGTCAGTTCAGCAAGGCGAACTAGTCGCTCTGATGGGTCCCTCGGGATGCGGCAAGACT ACACTACTTAACGTTCTGGCTCGTCGCGCAGCATCATCGGGAGCAAAGACGACTGGAGATTGCTATATAGACGGG AAGACTGTTGATAATGCGACGTTTGGCCGACTTACTTCTTACGTGGAGCAGGAGGATGCGCTGATCGGGTCGCTG ACGGTGCGCGAGACACTGAAATTCGCCGCAGATCTCTCGTTGCCCAGCTCCGTTACGAAGCTTCAACGGAAGGAG CGCATTCAGTCTCTTTTACAAGCTTTTGGAATCCAGAACCAGGCATCTACTTTGGTCGGCACGCCCATTCGCAAG GGAATCAGTGGTGGTCAGAAACGGCGTGTCAGCGTGGCAAGTCAACTCATGACGTGCCCTAAGATTCTGTTTTTG GATGAACCGACGAGCGGACTGGACTCGTCTGCTAGCTTTGAGGTCATCTCCTACGTCAAGGAGATGGCGGTTGCG AACAACCTCATCATAATTGCTAGTATTCACCAGCCGTCCACGACTACATTCCAGCTTTTCGATAAGCTGCTCCTC CTCTCGAGCGGAAAAACGTGCTACTTCGGTCCTGTGACAGATGTGCCGACCTATTTTGACACTATTGGCTACTCG CTTCCAATGAACACCAACCCAGCCGAGTTTATCCTCGATCTTGTCAGCTCCGATTTCTTAGGCAGCACACAAACC ATGTCCAAGGATCAGGTCCAGCGGATTCATACAAGCTGGGCTGAATCCTCCAATGCCGCAGCGCTGACAGACCAG GTCTCGCAGCGGACCATGGTATCCGAGAAACAAGCAGCTAAAACTGAAATGGACGAGCTAAGTCGCCCGGGTATT CTCAGCATCACTCTTACCCTCCTGCACCGCTCCTTCATCAAGAGTTACCGTGATGTTGTGGCATACGGCATCCGT ATCGCCATGTACCTGGGGCTGGCAATCATGATGGGAACCGTCTGGCTGCGTCTGCACACCGAACAGAGCTACATC CAGCCCTTTATCAACGCAATCTTCTTCGGCTCCGCCTTCATGAGCTTTATGGCAGTAGCCTACGTTCCCGCCTTT ATCGAAGACCGCATGACCTTCATCAAAGAACGCGCCAACGGACTCTACGGCGCCCTGCCCTTCATTGTCTCCAAC TTTATCATCGGCCTTCCCTTCCTCTTCCTGATCTCCCTCCTCTTCTCCATAATCTCCTACTGGCTCTCCAACTTC AACCCCACCGCCACCTCCTTCTTCACCTGGGTAATGTGGCTCTTCCTCGACCTCGTAGCCGCCGAATCCCTCGTC GTCTTCATGACCTCCATCTTCCCCAACTTCGTCATCTCCCTCGCCCTCGTCGCCTTCGCCAACGGTCTCTGGATG AGCGTCGGCGGGTTCCTCGTGACCCCCAAGATTCTCAACCCCTTTTGGAAATACGTTTTCCATTATATAGATTAT CAGGCATACGTCTTCCAAGGCATGATGGTCAACGAATTCCAGCATAGGACCTACTCTTGCGGCGAATCCTGCCAA TGCATGTATCAGACGGACTTGGCCTCCGAGTGTAAGATCCGCGGGACGGGCGTACTGCAGGAATATGGCTATGCT ACGGGCAGGACGGGTAAGTGGGTGGGGATTCTTATTGGTATTATTGCTGTGTATCGGCTTTTTGCGTATTGTGCG TTGGTGGTGAGGAGGACTTAG |
| Gene | >Ani_SJS72_1|g10150.t1 ATGGATGACCGCTCATCTAAGCTCGATGGTTCTGACCTCGAGCGCAACGAAAGTTCCAGCTTCTTTAAGAATAAT ACCGTCAACGACTTTTCCTGGCGAAATCTCACCGTCACCGTCAAGGACCGCCATACTAAACAGCCCCGGAACCTG ATCGATGGAATCAGCGGGTCAGTTCAGCAAGGTTGGTGGCTACTTCCCGGAACTCTATGTATCCATCCCGGACGA ACACCCGATTAACTCTACCAATGAATAGGCGAACTAGTCGCTCTGATGGGTCCCTCGGGATGCGGCAAGACTACA CTACTTAACGTTCTGGCTCGTCGCGCAGCATCATCGGGAGCAAAGACGACTGGAGATTGCTATATAGACGGGAAG ACTGTTGATAATGCGACGTTTGGCCGACTTACTTCTTACGTGGAGCAGGAGGATGCGCTGATCGGGTCGCTGACG GTGCGCGAGACACTGAAATTCGCCGCAGATCTCTCGTTGCCCAGGTGTGTCTTTTCCTATGCTGTGGTGACTGGC GGTAGTGCTAATGAATTAGCTCCGTTACGAAGCTTCAACGGAAGGAGCGCATTCAGTCTCTTTTACAAGCTTTTG GAATCCAGAACCAGGCATCTACTTTGGTCGGCACGCCCATTCGCAAGGGAATCAGTGGTGGTCAGAAACGGCGTG TCAGCGTGGCAAGTCAACTCATGACGTGCCCTAAGATTCTGTTTTTGGATGAACCGACGAGCGGACTGGACTCGT CTGCTAGCTTTGAGGTCATCTCCTACGTCAAGGAGATGGCGGTTGCGAACAACGTACGCTAACATTCATTCGGAG AAGTCCAACCAGGCTAACATCTCACAGCTCATCATAATTGCTAGTATTCACCAGCCGTCCACGACTACATTCCAG CTTTTCGATAAGCTGCTCCTCCTCTCGAGCGGAAAAACGTGCTACTTCGGTCCTGTGACAGATGTGCCGACCTAT TTTGACACTATTGGCTACTCGCTTCCAATGAACACCAACCCAGCCGAGTTTATCCTCGATCTTGTCAGCTCCGAT TTCTTAGGCAGCACACAAACCATGTCCAAGGATCAGGTCCAGCGGATTCATACAAGCTGGGCTGAATCCTCCAAT GCCGCAGCGCTGACAGACCAGGTCTCGCAGCGGACCATGGTATCCGAGAAACAAGCAGCTAAAACTGAAATGGAC GAGCTAAGTCGCCCGGGTATTCTCAGCATCACTCTTACCCTCCTGCACCGCTCCTTCATCAAGAGTTACCGTGAT GTTGTGGCATACGGCATCCGTATCGCCATGTACCTGGGTATGTATATCGGCCATCTACAGGGGAGACGAAACTGA CCTATCCATTAGGGCTGGCAATCATGATGGGAACCGTCTGGCTGCGTCTGCACACCGAACAGAGCTACATCCAGC CCTTTATCAACGCAATCGTAAGCCCCCTTCGCAAGTCACTAATCAAGACAACACAGCTAACGTCTTCACCACCAC CAGTTCTTCGGCTCCGCCTTCATGAGCTTTATGGCAGTAGCCTACGTTCCCGCCTTTATCGAAGACCGCATGACC TTCATCAAAGAACGCGCCAACGGACTCTACGGCGCCCTGCCCTTCATTGTCTCCAACTTTATCATCGGCCTTCCC TTCCTCTGTACATGCCCCCCATCCACCCACCATCCCAATTCACTAACAAGAAATCCAGTCCTGATCTCCCTCCTC TTCTCCATAATCTCCTACTGGCTCTCCAACTTCAACCCCACCGCCACCTCCTTCTTCACCTGGGTAATGTGGCTC TTCCTCGACCTCGTAGCCGCCGAATCCCTCGTCGTCTTCATGACCTCCATCTTCCCCAACTTCGTCATCTCCCTC GCCCTCGTCGCCTTCGCCAACGGTCTCTGGATGAGCGTCGGCGGGTTCCTCGTGACCCCCAAGATTCTCAACCCC TTTTGGAAATACGTTTTCCATTATATAGATTATCAGGTACCTCCACCCCTTCCCCCAAGCACCCCTCCATCAACA CCCAATACTAATAGGCGGATGAAAGGCATACGTCTTCCAAGGCATGATGGTCAACGAATTCCAGCATAGGACCTA CTCTTGCGGCGAATCCTGCCAATGCATGTATCAGACGGACTTGGCCTCCGAGTGTAAGATCCGCGGGACGGGCGT ACTGCAGGAATATGGCTATGCTACGGGCAGGACGGGTAAGTGGGTGGGGATTCTTATTGGTATTATTGCTGTGTA TCGGCTTTTTGCGTATTGTGCGTTGGTGGTGAGGAGGACTTAG |