© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g10109.t1 |
| Gene name | |
| Location | scaffold_125:24873..26226 |
| Strand | + |
| Gene length (bp) | 1353 |
| Transcript length (bp) | 1287 |
| Coding sequence length (bp) | 1287 |
| Protein length (aa) | 429 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08449 | UAA | UAA transporter family | 3.3E-43 | 62 | 409 |
| PF00892 | EamA | EamA-like transporter family | 2.3E-06 | 337 | 405 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 110 | 132 | 22 |
| 2 | 147 | 169 | 22 |
| 3 | 174 | 196 | 22 |
| 4 | 206 | 225 | 19 |
| 5 | 286 | 308 | 22 |
| 6 | 341 | 360 | 19 |
| 7 | 365 | 387 | 22 |
| 8 | 392 | 411 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10109.t1 MARQKQAAPLQRATSSELMHVPSEDSQSPGKRIIGKSSVANGSASGKQAAQENAPETPGLMQLAICVLGIYASFL SWGVLQEAITTVSYPTHPPTAEVPEPPTERFTYSIVLNTIQSTFAAITGFLYLFFSTPSGQKIPSPFPTKKIVFP LLLVSISSSLASPFGYASLAHIDYLTFILAKSCKLLPVMFLHLTIFRKRYPLYKYGVVLLVTLGVATFTLHHPGT SKKVAASAAKGQSGSSTWGIFLLSINLLLDGLTNTTQDHVFSSPQLYTRFTGPQMMVAQNVLSTVLTSSYLLIMP HLSSTGILHNLLPFPIPPSTETELNSAIGFLSRHPEALKNVLGFAACGAIGQLFIFYTLSRFSSLLLVTVTVTRK MLTMLLSVFWFGHSLSAGQWLGVGLVFGGIGAEAIVQRQEKAAKERAKAAKKQ* |
| Coding | >Ani_SJS72_1|g10109.t1 ATGGCGCGCCAGAAACAAGCTGCGCCTTTGCAACGCGCCACGTCCTCTGAACTGATGCATGTGCCTTCGGAAGAT TCACAGTCGCCAGGCAAGAGGATTATTGGGAAATCTTCCGTCGCAAATGGAAGTGCGTCTGGAAAGCAAGCGGCG CAGGAGAATGCGCCGGAGACTCCCGGTTTGATGCAGCTTGCGATCTGTGTTTTGGGAATCTACGCTTCATTTCTG TCCTGGGGCGTGCTTCAAGAAGCCATCACCACAGTGTCCTATCCTACTCATCCTCCGACTGCTGAAGTCCCCGAA CCTCCGACAGAGCGCTTCACCTACTCGATTGTCCTGAACACGATCCAGTCGACCTTTGCCGCCATCACCGGCTTC CTGTACCTGTTCTTTTCGACTCCGTCCGGCCAGAAGATCCCCTCTCCCTTCCCAACCAAGAAAATCGTCTTCCCC TTGCTCCTGGTCAGCATCTCTTCGTCTCTCGCATCGCCTTTCGGATATGCCAGTCTCGCGCACATCGATTACCTC ACCTTCATCCTCGCCAAATCGTGCAAGCTCCTGCCCGTCATGTTCCTCCACCTGACCATTTTCCGCAAGAGATAC CCCTTGTACAAGTACGGTGTCGTTCTCCTGGTCACACTCGGAGTCGCCACATTCACCCTCCACCACCCCGGTACT AGCAAGAAGGTCGCCGCATCAGCCGCTAAGGGCCAGTCGGGCTCGAGCACATGGGGAATCTTCCTCCTCTCCATC AACCTGCTCCTGGACGGCCTCACGAACACCACCCAGGACCACGTCTTCAGCTCTCCGCAGCTGTACACGCGCTTC ACCGGGCCGCAAATGATGGTTGCCCAGAATGTCCTCTCGACTGTCCTGACGAGCAGCTACCTGTTGATCATGCCC CATCTGTCATCTACCGGCATTCTGCACAACCTCCTCCCGTTCCCGATTCCCCCATCCACAGAGACGGAGCTGAAC TCCGCCATTGGCTTCCTATCCCGTCACCCGGAAGCCCTGAAGAATGTGCTCGGATTCGCTGCCTGCGGAGCCATC GGACAGCTGTTTATCTTCTACACGCTGTCGCGCTTCTCATCCTTGCTTCTGGTCACGGTGACGGTCACGCGCAAG ATGCTGACCATGCTCCTGAGTGTGTTCTGGTTCGGCCACTCCCTCTCGGCGGGCCAGTGGTTGGGCGTGGGCCTT GTCTTTGGTGGTATTGGTGCCGAAGCTATTGTTCAACGGCAGGAGAAGGCCGCCAAAGAGCGAGCGAAGGCTGCT AAGAAGCAGTAG |
| Transcript | >Ani_SJS72_1|g10109.t1 ATGGCGCGCCAGAAACAAGCTGCGCCTTTGCAACGCGCCACGTCCTCTGAACTGATGCATGTGCCTTCGGAAGAT TCACAGTCGCCAGGCAAGAGGATTATTGGGAAATCTTCCGTCGCAAATGGAAGTGCGTCTGGAAAGCAAGCGGCG CAGGAGAATGCGCCGGAGACTCCCGGTTTGATGCAGCTTGCGATCTGTGTTTTGGGAATCTACGCTTCATTTCTG TCCTGGGGCGTGCTTCAAGAAGCCATCACCACAGTGTCCTATCCTACTCATCCTCCGACTGCTGAAGTCCCCGAA CCTCCGACAGAGCGCTTCACCTACTCGATTGTCCTGAACACGATCCAGTCGACCTTTGCCGCCATCACCGGCTTC CTGTACCTGTTCTTTTCGACTCCGTCCGGCCAGAAGATCCCCTCTCCCTTCCCAACCAAGAAAATCGTCTTCCCC TTGCTCCTGGTCAGCATCTCTTCGTCTCTCGCATCGCCTTTCGGATATGCCAGTCTCGCGCACATCGATTACCTC ACCTTCATCCTCGCCAAATCGTGCAAGCTCCTGCCCGTCATGTTCCTCCACCTGACCATTTTCCGCAAGAGATAC CCCTTGTACAAGTACGGTGTCGTTCTCCTGGTCACACTCGGAGTCGCCACATTCACCCTCCACCACCCCGGTACT AGCAAGAAGGTCGCCGCATCAGCCGCTAAGGGCCAGTCGGGCTCGAGCACATGGGGAATCTTCCTCCTCTCCATC AACCTGCTCCTGGACGGCCTCACGAACACCACCCAGGACCACGTCTTCAGCTCTCCGCAGCTGTACACGCGCTTC ACCGGGCCGCAAATGATGGTTGCCCAGAATGTCCTCTCGACTGTCCTGACGAGCAGCTACCTGTTGATCATGCCC CATCTGTCATCTACCGGCATTCTGCACAACCTCCTCCCGTTCCCGATTCCCCCATCCACAGAGACGGAGCTGAAC TCCGCCATTGGCTTCCTATCCCGTCACCCGGAAGCCCTGAAGAATGTGCTCGGATTCGCTGCCTGCGGAGCCATC GGACAGCTGTTTATCTTCTACACGCTGTCGCGCTTCTCATCCTTGCTTCTGGTCACGGTGACGGTCACGCGCAAG ATGCTGACCATGCTCCTGAGTGTGTTCTGGTTCGGCCACTCCCTCTCGGCGGGCCAGTGGTTGGGCGTGGGCCTT GTCTTTGGTGGTATTGGTGCCGAAGCTATTGTTCAACGGCAGGAGAAGGCCGCCAAAGAGCGAGCGAAGGCTGCT AAGAAGCAGTAG |
| Gene | >Ani_SJS72_1|g10109.t1 ATGGCGCGCCAGAAACAAGCTGCGCCTTTGCAACGCGCCACGTCCTCTGAACTGATGCATGTGCCTTCGGAAGAT TCACAGTCGCCAGGCAAGAGGATTATTGGGAAATCTTCCGTCGCAAATGGAAGTGCGTCTGGAAAGCAAGCGGCG CAGGAGAATGCGCCGGAGACTCCCGGTTTGATGCAGCTTGCGATCTGTGTTTTGGGAATCTACGCTTCATTGTAT GTCTTCCGTTCGTGGTGTCGAGAACTTCCGAAGTCATCAAAATGCTGACTGCGATTTCTTAGTCTGTCCTGGGGC GTGCTTCAAGAAGCCATCACCACAGTGTCCTATCCTACTCATCCTCCGACTGCTGAAGTCCCCGAACCTCCGACA GAGCGCTTCACCTACTCGATTGTCCTGAACACGATCCAGTCGACCTTTGCCGCCATCACCGGCTTCCTGTACCTG TTCTTTTCGACTCCGTCCGGCCAGAAGATCCCCTCTCCCTTCCCAACCAAGAAAATCGTCTTCCCCTTGCTCCTG GTCAGCATCTCTTCGTCTCTCGCATCGCCTTTCGGATATGCCAGTCTCGCGCACATCGATTACCTCACCTTCATC CTCGCCAAATCGTGCAAGCTCCTGCCCGTCATGTTCCTCCACCTGACCATTTTCCGCAAGAGATACCCCTTGTAC AAGTACGGTGTCGTTCTCCTGGTCACACTCGGAGTCGCCACATTCACCCTCCACCACCCCGGTACTAGCAAGAAG GTCGCCGCATCAGCCGCTAAGGGCCAGTCGGGCTCGAGCACATGGGGAATCTTCCTCCTCTCCATCAACCTGCTC CTGGACGGCCTCACGAACACCACCCAGGACCACGTCTTCAGCTCTCCGCAGCTGTACACGCGCTTCACCGGGCCG CAAATGATGGTTGCCCAGAATGTCCTCTCGACTGTCCTGACGAGCAGCTACCTGTTGATCATGCCCCATCTGTCA TCTACCGGCATTCTGCACAACCTCCTCCCGTTCCCGATTCCCCCATCCACAGAGACGGAGCTGAACTCCGCCATT GGCTTCCTATCCCGTCACCCGGAAGCCCTGAAGAATGTGCTCGGATTCGCTGCCTGCGGAGCCATCGGACAGCTG TTTATCTTCTACACGCTGTCGCGCTTCTCATCCTTGCTTCTGGTCACGGTGACGGTCACGCGCAAGATGCTGACC ATGCTCCTGAGTGTGTTCTGGTTCGGCCACTCCCTCTCGGCGGGCCAGTGGTTGGGCGTGGGCCTTGTCTTTGGT GGTATTGGTGCCGAAGCTATTGTTCAACGGCAGGAGAAGGCCGCCAAAGAGCGAGCGAAGGCTGCTAAGAAGCAG TAG |