Protein ID | Ani_SJS72_1|g1010.t1 |
Gene name | |
Location | scaffold_004:609797..612159 |
Strand | + |
Gene length (bp) | 2362 |
Transcript length (bp) | 1692 |
Coding sequence length (bp) | 1692 |
Protein length (aa) | 564 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00324 | AA_permease | Amino acid permease | 1.2E-103 | 91 | 523 |
PF13520 | AA_permease_2 | Amino acid permease | 5.0E-20 | 97 | 505 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016020 | membrane | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005215 | transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 38 | 55 | 17 |
2 | 59 | 78 | 19 |
3 | 99 | 121 | 22 |
4 | 136 | 158 | 22 |
5 | 165 | 187 | 22 |
6 | 202 | 223 | 21 |
7 | 289 | 311 | 22 |
8 | 343 | 365 | 22 |
9 | 390 | 412 | 22 |
10 | 417 | 439 | 22 |
11 | 467 | 489 | 22 |
12 | 493 | 515 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 7264 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g1010.t1 MGRTEKDAVVRDSEEIVEDESKKLAYDHTHRKLKPRHIQLIGIGGTIGTVLYVQIGKALMEGGPASLFIAFIIWR RLLVSFWKPKHKVQELAFAQWSAVILCITVCLAEMVTYLPISSPFIRFATRYVDEAFGVAAGYNFFIFQAAMVPF EVTACNLIITYWSDAVPVAGIIVIVLVLFGLLNIFAVKWYGEAEFWLSLSKVLLSVGLIFFTFIVMLGGNPLGDR FGFRYWKNPGAFNEYYKTGDLGRWLGFLACLIQASFTIAGPDYVSMAAGEAVNPRKILPKAYNGIFYRLTTFFVL GVLCVGILVPYNDPDLAAAYEKDLPGAAASPYVVAMDRLKIPVLPHIVNAMVLLAAFSAGNSYVYCASRSLYGLA LDGKAPRILTKCTKTGVPIYCVLIVFVFALLAFLQVSNGSAVVLNWFVNLVTASQLINFSVITFTYTRFRKALMA QGVPRTSLPYQSRGQPYVAYIALVSTFVMTFISGYTVFLPGNWDIPTFFFSYTMIGVFPVIYVGWKLWHRTKFLS PKEIDIVTGVEEVDVYTRNYVEEPSSNAFTRFNDMVFG* |
Coding | >Ani_SJS72_1|g1010.t1 ATGGGACGCACTGAGAAGGATGCTGTCGTTCGCGACAGTGAAGAAATAGTCGAAGATGAATCGAAGAAGCTTGCC TACGACCATACGCACCGCAAGCTGAAGCCCAGGCATATCCAGCTTATCGGTATCGGCGGCACAATCGGGACCGTT TTGTACGTCCAGATTGGCAAAGCACTGATGGAGGGTGGCCCTGCTAGTCTCTTCATCGCATTTATTATCTGGCGT CGTTTATTGGTAAGTTTCTGGAAGCCGAAGCACAAAGTACAGGAACTCGCTTTCGCCCAATGGTCCGCTGTCATT CTATGTATAACTGTTTGTTTGGCTGAGATGGTCACATATTTGCCCATTTCCTCGCCCTTTATCCGCTTTGCAACT CGATACGTTGACGAGGCCTTTGGGGTTGCTGCCGGTTACAACTTCTTCATCTTTCAAGCTGCCATGGTGCCATTT GAAGTTACAGCGTGTAACCTGATTATCACTTACTGGAGCGATGCGGTCCCAGTCGCCGGAATCATTGTAATTGTG CTTGTGCTCTTTGGGCTACTCAACATCTTCGCAGTGAAGTGGTATGGCGAAGCCGAATTCTGGCTTTCCCTGAGC AAGGTCTTGCTTAGTGTGGGCCTGATCTTCTTTACATTCATTGTGATGCTCGGAGGCAACCCCCTTGGCGATCGA TTTGGATTCCGCTACTGGAAGAACCCTGGGGCATTCAACGAATACTACAAGACTGGAGATCTAGGCCGATGGCTC GGGTTTCTTGCTTGCCTCATCCAAGCCAGTTTCACGATCGCCGGTCCTGACTACGTCTCCATGGCTGCCGGTGAA GCAGTCAACCCCCGCAAAATCCTGCCCAAAGCATACAATGGCATCTTCTATCGACTCACCACCTTTTTCGTTCTT GGTGTGCTCTGCGTTGGTATCTTAGTTCCCTACAACGATCCTGACCTGGCTGCTGCGTACGAAAAAGACCTGCCT GGTGCAGCCGCATCACCGTATGTTGTCGCCATGGACCGGCTGAAAATTCCCGTCCTGCCACACATCGTCAATGCT ATGGTCCTCCTCGCTGCTTTCAGTGCCGGAAACAGTTACGTCTACTGCGCCAGCAGAAGTCTGTACGGTCTTGCT CTGGATGGCAAGGCTCCGCGCATTCTCACCAAATGTACAAAAACCGGTGTGCCAATATACTGCGTCTTGATTGTG TTCGTTTTTGCGCTGTTGGCTTTCCTACAGGTTTCTAATGGGTCAGCTGTCGTGCTGAATTGGTTCGTTAATCTT GTCACTGCATCCCAACTGATCAACTTTTCCGTCATTACTTTCACCTACACCCGGTTCAGAAAAGCTCTCATGGCA CAGGGTGTCCCTCGCACATCCCTTCCCTACCAGAGTCGTGGCCAGCCCTATGTCGCCTACATTGCCTTAGTCTCG ACTTTCGTCATGACTTTCATAAGCGGCTACACGGTCTTCTTACCTGGCAACTGGGACATCCCGACTTTCTTCTTC TCGTATACCATGATCGGAGTGTTTCCTGTCATCTACGTGGGATGGAAACTCTGGCATCGTACGAAGTTTTTGAGC CCAAAGGAAATTGATATCGTCACTGGAGTCGAAGAAGTGGATGTGTATACGAGGAATTATGTGGAGGAACCTTCA AGTAACGCTTTTACGAGATTCAACGATATGGTTTTTGGTTAA |
Transcript | >Ani_SJS72_1|g1010.t1 ATGGGACGCACTGAGAAGGATGCTGTCGTTCGCGACAGTGAAGAAATAGTCGAAGATGAATCGAAGAAGCTTGCC TACGACCATACGCACCGCAAGCTGAAGCCCAGGCATATCCAGCTTATCGGTATCGGCGGCACAATCGGGACCGTT TTGTACGTCCAGATTGGCAAAGCACTGATGGAGGGTGGCCCTGCTAGTCTCTTCATCGCATTTATTATCTGGCGT CGTTTATTGGTAAGTTTCTGGAAGCCGAAGCACAAAGTACAGGAACTCGCTTTCGCCCAATGGTCCGCTGTCATT CTATGTATAACTGTTTGTTTGGCTGAGATGGTCACATATTTGCCCATTTCCTCGCCCTTTATCCGCTTTGCAACT CGATACGTTGACGAGGCCTTTGGGGTTGCTGCCGGTTACAACTTCTTCATCTTTCAAGCTGCCATGGTGCCATTT GAAGTTACAGCGTGTAACCTGATTATCACTTACTGGAGCGATGCGGTCCCAGTCGCCGGAATCATTGTAATTGTG CTTGTGCTCTTTGGGCTACTCAACATCTTCGCAGTGAAGTGGTATGGCGAAGCCGAATTCTGGCTTTCCCTGAGC AAGGTCTTGCTTAGTGTGGGCCTGATCTTCTTTACATTCATTGTGATGCTCGGAGGCAACCCCCTTGGCGATCGA TTTGGATTCCGCTACTGGAAGAACCCTGGGGCATTCAACGAATACTACAAGACTGGAGATCTAGGCCGATGGCTC GGGTTTCTTGCTTGCCTCATCCAAGCCAGTTTCACGATCGCCGGTCCTGACTACGTCTCCATGGCTGCCGGTGAA GCAGTCAACCCCCGCAAAATCCTGCCCAAAGCATACAATGGCATCTTCTATCGACTCACCACCTTTTTCGTTCTT GGTGTGCTCTGCGTTGGTATCTTAGTTCCCTACAACGATCCTGACCTGGCTGCTGCGTACGAAAAAGACCTGCCT GGTGCAGCCGCATCACCGTATGTTGTCGCCATGGACCGGCTGAAAATTCCCGTCCTGCCACACATCGTCAATGCT ATGGTCCTCCTCGCTGCTTTCAGTGCCGGAAACAGTTACGTCTACTGCGCCAGCAGAAGTCTGTACGGTCTTGCT CTGGATGGCAAGGCTCCGCGCATTCTCACCAAATGTACAAAAACCGGTGTGCCAATATACTGCGTCTTGATTGTG TTCGTTTTTGCGCTGTTGGCTTTCCTACAGGTTTCTAATGGGTCAGCTGTCGTGCTGAATTGGTTCGTTAATCTT GTCACTGCATCCCAACTGATCAACTTTTCCGTCATTACTTTCACCTACACCCGGTTCAGAAAAGCTCTCATGGCA CAGGGTGTCCCTCGCACATCCCTTCCCTACCAGAGTCGTGGCCAGCCCTATGTCGCCTACATTGCCTTAGTCTCG ACTTTCGTCATGACTTTCATAAGCGGCTACACGGTCTTCTTACCTGGCAACTGGGACATCCCGACTTTCTTCTTC TCGTATACCATGATCGGAGTGTTTCCTGTCATCTACGTGGGATGGAAACTCTGGCATCGTACGAAGTTTTTGAGC CCAAAGGAAATTGATATCGTCACTGGAGTCGAAGAAGTGGATGTGTATACGAGGAATTATGTGGAGGAACCTTCA AGTAACGCTTTTACGAGATTCAACGATATGGTTTTTGGTTAA |
Gene | >Ani_SJS72_1|g1010.t1 ATGGGACGCACTGAGAAGGATGCTGTCGTTCGCGACAGTGAAGAAATAGTCGAAGATGAATCGAAGAAGCTTGCC TACGACCATACGCACCGCAAGCTGAAGCCCAGGCATATCCAGCTTATCGGTATCGGCGGCACAATCGGGACCGTT TTGTACGTCCAGATTGGCAAAGCACTGATGGAGGGTGGCCCTGCTAGTCTCTTCATCGCATTTATTATCTGGTTA GTCTTGATCCCATCACTCTGTTCTCTTGTCTTTCGCTGTTCCCTTACGGTGCTGCAATTCCCATCTTGTGAACTG TCTCAAAAGGCGTCGTTTATTGGTAAGTTTCTGGAAGCCGAAGCACAAAGTACAGGAACTCGCTTTCGCCCAATG GTCAGCGTCTGCAAGGATGTCTTTCAACATCAGACACCTCATGCACTATACGTAGATAGCGCAGTGTCAGCTTTT CCTCCTTGTTCCTGATGTGTGCTCCACCCTAGAGGCAGCAGAATTTCGGGATTGCCTGGCCTTGCCTTGTGCATA TTGCTGCTAAATTTATGGAATCTTATACCTCGTTTATATATAGGTCCGCTGTCATTCTATGTATAACTGTTTGTA CGGATTCCCTTTCCCTGCGATCTTGAAGCCCTTCCTATCTTCCCTCATGCCGCCAGCGACACAAAAGCTGCCAAT TGCGACCTGTGCGATTTTATCTGCATGCCCCAAAGCGCCGAATTCCCAATGGCCTCTGATTCCGTCGCAACAACT TGGCTCGCGCATTTGTTCCCTTTGAAGTAGCATTCCACTAAGATAATACCTATGCTAGGTTTGGCTGAGATGGTC ACATATTTGCCCATTTCCTCGCCCTTTATCCGCTTTGCAACTCGATACGTTGACGAGGCCTTTGGGGTTGCTGCC GGTTACAACTTCTTCATCTTTCAAGCTGCCATGGTGCCATTTGAAGTTACAGCGTGTAACCTGATTATCACTTAC TGGAGCGATGCGGTCCCAGTCGCCGGAATCATTGTAATTGTGCTTGTGCTCTTTGGGTATGTTATGCTCTCGATC GAAGCATACCTCCTGTGCAACTTGAAGCAGTTCAAGCTAACAAGTATCAGGCTACTCAACATCTTCGCAGTGAAG TGGTATGGCGAAGCCGAATTCTGGCTTTCCCTGAGCAAGGTCTTGCTTAGTGTGGGCCTGATCTTCTTTACATTC ATTGTGATGCTCGGAGGCAACCCCCTTGGCGATCGATTTGGATTCCGCTACTGGAAGAACCCTGGGGCATTCAAC GAATACTACAAGACTGGAGATCTAGGCCGATGGCTCGGGTTTCTTGCTTGCCTCATCCAAGCCAGTTTCACGATC GCCGGTCCTGACTACGTCTCCATGGCTGCCGGTGAAGCAGTCAACCCCCGCAAAATCCTGCCCAAAGCATACAAT GGCATCTTCTATCGACTCACCACCTTTTTCGTTCTTGGTGTGCTCTGCGTTGGTATCTTAGTTCCCTACAACGAT CCTGACCTGGCTGCTGCGTACGAAAAAGACCTGCCTGGTGCAGCCGCATCACCGTATGTTGTCGCCATGGACCGG CTGAAAATTCCCGTCCTGCCACACATCGTCAATGCTATGGTCCTCCTCGCTGCTTTCAGTGCCGGAAACAGTTAC GTCTACTGCGCCAGCAGAAGTCTGTACGGTCTTGCTCTGGATGGCAAGGCTCCGCGCATTCTCACCAAATGTACA AAAACCGGTGTGCCAATATACTGCGTCTTGATTGTGTTCGTTTTTGCGCTGTTGGCTTTCCTACAGGTTTCTAAT GGGTCAGCTGTCGTGCTGAATTGGTTCGTTAATCTTGTGAGTCTTTTCCCATCATTTACTTCTTCCGCAAATTCT GATGAAACACAAATCAGGTCACTGCATCCCAACTGATCAACTTTTCCGTCATTACTTTCACCTACACCCGGTTCA GAAAAGCTCTCATGGCACAGGGTGTCCCTCGCACATCCCTTCCCTACCAGAGTCGTGGCCAGCCCTATGTCGCCT ACATTGCCTTAGTCTCGACTTTCGTCATGACTTTCATAAGCGGCTACACGGTCTTCTTACCTGGCAACTGGGACA TCCCGACTTTCTTCTTCTCGTATACCATGATCGGAGTGTTTCCTGTCATCTACGTGGGATGGAAACTCTGGCATC GTACGAAGTTTTTGAGCCCAAAGGAAATTGATATCGTCACTGGAGTCGAAGAAGTGGATGTGTATACGAGGAATT ATGTGGAGGAACCTTCAAGGTAGGTCTATCTGGTATACTTCTGATGGTCTGGAAACTAAGTATCGCACACAGTAA CGCTTTTACGAGATTCAACGATATGGTTTTTGGTTAA |