© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1010.t1 |
| Gene name | |
| Location | scaffold_004:609797..612159 |
| Strand | + |
| Gene length (bp) | 2362 |
| Transcript length (bp) | 1692 |
| Coding sequence length (bp) | 1692 |
| Protein length (aa) | 564 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 1.2E-103 | 91 | 523 |
| PF13520 | AA_permease_2 | Amino acid permease | 5.0E-20 | 97 | 505 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 55 | 17 |
| 2 | 59 | 78 | 19 |
| 3 | 99 | 121 | 22 |
| 4 | 136 | 158 | 22 |
| 5 | 165 | 187 | 22 |
| 6 | 202 | 223 | 21 |
| 7 | 289 | 311 | 22 |
| 8 | 343 | 365 | 22 |
| 9 | 390 | 412 | 22 |
| 10 | 417 | 439 | 22 |
| 11 | 467 | 489 | 22 |
| 12 | 493 | 515 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1010.t1 MGRTEKDAVVRDSEEIVEDESKKLAYDHTHRKLKPRHIQLIGIGGTIGTVLYVQIGKALMEGGPASLFIAFIIWR RLLVSFWKPKHKVQELAFAQWSAVILCITVCLAEMVTYLPISSPFIRFATRYVDEAFGVAAGYNFFIFQAAMVPF EVTACNLIITYWSDAVPVAGIIVIVLVLFGLLNIFAVKWYGEAEFWLSLSKVLLSVGLIFFTFIVMLGGNPLGDR FGFRYWKNPGAFNEYYKTGDLGRWLGFLACLIQASFTIAGPDYVSMAAGEAVNPRKILPKAYNGIFYRLTTFFVL GVLCVGILVPYNDPDLAAAYEKDLPGAAASPYVVAMDRLKIPVLPHIVNAMVLLAAFSAGNSYVYCASRSLYGLA LDGKAPRILTKCTKTGVPIYCVLIVFVFALLAFLQVSNGSAVVLNWFVNLVTASQLINFSVITFTYTRFRKALMA QGVPRTSLPYQSRGQPYVAYIALVSTFVMTFISGYTVFLPGNWDIPTFFFSYTMIGVFPVIYVGWKLWHRTKFLS PKEIDIVTGVEEVDVYTRNYVEEPSSNAFTRFNDMVFG* |
| Coding | >Ani_SJS72_1|g1010.t1 ATGGGACGCACTGAGAAGGATGCTGTCGTTCGCGACAGTGAAGAAATAGTCGAAGATGAATCGAAGAAGCTTGCC TACGACCATACGCACCGCAAGCTGAAGCCCAGGCATATCCAGCTTATCGGTATCGGCGGCACAATCGGGACCGTT TTGTACGTCCAGATTGGCAAAGCACTGATGGAGGGTGGCCCTGCTAGTCTCTTCATCGCATTTATTATCTGGCGT CGTTTATTGGTAAGTTTCTGGAAGCCGAAGCACAAAGTACAGGAACTCGCTTTCGCCCAATGGTCCGCTGTCATT CTATGTATAACTGTTTGTTTGGCTGAGATGGTCACATATTTGCCCATTTCCTCGCCCTTTATCCGCTTTGCAACT CGATACGTTGACGAGGCCTTTGGGGTTGCTGCCGGTTACAACTTCTTCATCTTTCAAGCTGCCATGGTGCCATTT GAAGTTACAGCGTGTAACCTGATTATCACTTACTGGAGCGATGCGGTCCCAGTCGCCGGAATCATTGTAATTGTG CTTGTGCTCTTTGGGCTACTCAACATCTTCGCAGTGAAGTGGTATGGCGAAGCCGAATTCTGGCTTTCCCTGAGC AAGGTCTTGCTTAGTGTGGGCCTGATCTTCTTTACATTCATTGTGATGCTCGGAGGCAACCCCCTTGGCGATCGA TTTGGATTCCGCTACTGGAAGAACCCTGGGGCATTCAACGAATACTACAAGACTGGAGATCTAGGCCGATGGCTC GGGTTTCTTGCTTGCCTCATCCAAGCCAGTTTCACGATCGCCGGTCCTGACTACGTCTCCATGGCTGCCGGTGAA GCAGTCAACCCCCGCAAAATCCTGCCCAAAGCATACAATGGCATCTTCTATCGACTCACCACCTTTTTCGTTCTT GGTGTGCTCTGCGTTGGTATCTTAGTTCCCTACAACGATCCTGACCTGGCTGCTGCGTACGAAAAAGACCTGCCT GGTGCAGCCGCATCACCGTATGTTGTCGCCATGGACCGGCTGAAAATTCCCGTCCTGCCACACATCGTCAATGCT ATGGTCCTCCTCGCTGCTTTCAGTGCCGGAAACAGTTACGTCTACTGCGCCAGCAGAAGTCTGTACGGTCTTGCT CTGGATGGCAAGGCTCCGCGCATTCTCACCAAATGTACAAAAACCGGTGTGCCAATATACTGCGTCTTGATTGTG TTCGTTTTTGCGCTGTTGGCTTTCCTACAGGTTTCTAATGGGTCAGCTGTCGTGCTGAATTGGTTCGTTAATCTT GTCACTGCATCCCAACTGATCAACTTTTCCGTCATTACTTTCACCTACACCCGGTTCAGAAAAGCTCTCATGGCA CAGGGTGTCCCTCGCACATCCCTTCCCTACCAGAGTCGTGGCCAGCCCTATGTCGCCTACATTGCCTTAGTCTCG ACTTTCGTCATGACTTTCATAAGCGGCTACACGGTCTTCTTACCTGGCAACTGGGACATCCCGACTTTCTTCTTC TCGTATACCATGATCGGAGTGTTTCCTGTCATCTACGTGGGATGGAAACTCTGGCATCGTACGAAGTTTTTGAGC CCAAAGGAAATTGATATCGTCACTGGAGTCGAAGAAGTGGATGTGTATACGAGGAATTATGTGGAGGAACCTTCA AGTAACGCTTTTACGAGATTCAACGATATGGTTTTTGGTTAA |
| Transcript | >Ani_SJS72_1|g1010.t1 ATGGGACGCACTGAGAAGGATGCTGTCGTTCGCGACAGTGAAGAAATAGTCGAAGATGAATCGAAGAAGCTTGCC TACGACCATACGCACCGCAAGCTGAAGCCCAGGCATATCCAGCTTATCGGTATCGGCGGCACAATCGGGACCGTT TTGTACGTCCAGATTGGCAAAGCACTGATGGAGGGTGGCCCTGCTAGTCTCTTCATCGCATTTATTATCTGGCGT CGTTTATTGGTAAGTTTCTGGAAGCCGAAGCACAAAGTACAGGAACTCGCTTTCGCCCAATGGTCCGCTGTCATT CTATGTATAACTGTTTGTTTGGCTGAGATGGTCACATATTTGCCCATTTCCTCGCCCTTTATCCGCTTTGCAACT CGATACGTTGACGAGGCCTTTGGGGTTGCTGCCGGTTACAACTTCTTCATCTTTCAAGCTGCCATGGTGCCATTT GAAGTTACAGCGTGTAACCTGATTATCACTTACTGGAGCGATGCGGTCCCAGTCGCCGGAATCATTGTAATTGTG CTTGTGCTCTTTGGGCTACTCAACATCTTCGCAGTGAAGTGGTATGGCGAAGCCGAATTCTGGCTTTCCCTGAGC AAGGTCTTGCTTAGTGTGGGCCTGATCTTCTTTACATTCATTGTGATGCTCGGAGGCAACCCCCTTGGCGATCGA TTTGGATTCCGCTACTGGAAGAACCCTGGGGCATTCAACGAATACTACAAGACTGGAGATCTAGGCCGATGGCTC GGGTTTCTTGCTTGCCTCATCCAAGCCAGTTTCACGATCGCCGGTCCTGACTACGTCTCCATGGCTGCCGGTGAA GCAGTCAACCCCCGCAAAATCCTGCCCAAAGCATACAATGGCATCTTCTATCGACTCACCACCTTTTTCGTTCTT GGTGTGCTCTGCGTTGGTATCTTAGTTCCCTACAACGATCCTGACCTGGCTGCTGCGTACGAAAAAGACCTGCCT GGTGCAGCCGCATCACCGTATGTTGTCGCCATGGACCGGCTGAAAATTCCCGTCCTGCCACACATCGTCAATGCT ATGGTCCTCCTCGCTGCTTTCAGTGCCGGAAACAGTTACGTCTACTGCGCCAGCAGAAGTCTGTACGGTCTTGCT CTGGATGGCAAGGCTCCGCGCATTCTCACCAAATGTACAAAAACCGGTGTGCCAATATACTGCGTCTTGATTGTG TTCGTTTTTGCGCTGTTGGCTTTCCTACAGGTTTCTAATGGGTCAGCTGTCGTGCTGAATTGGTTCGTTAATCTT GTCACTGCATCCCAACTGATCAACTTTTCCGTCATTACTTTCACCTACACCCGGTTCAGAAAAGCTCTCATGGCA CAGGGTGTCCCTCGCACATCCCTTCCCTACCAGAGTCGTGGCCAGCCCTATGTCGCCTACATTGCCTTAGTCTCG ACTTTCGTCATGACTTTCATAAGCGGCTACACGGTCTTCTTACCTGGCAACTGGGACATCCCGACTTTCTTCTTC TCGTATACCATGATCGGAGTGTTTCCTGTCATCTACGTGGGATGGAAACTCTGGCATCGTACGAAGTTTTTGAGC CCAAAGGAAATTGATATCGTCACTGGAGTCGAAGAAGTGGATGTGTATACGAGGAATTATGTGGAGGAACCTTCA AGTAACGCTTTTACGAGATTCAACGATATGGTTTTTGGTTAA |
| Gene | >Ani_SJS72_1|g1010.t1 ATGGGACGCACTGAGAAGGATGCTGTCGTTCGCGACAGTGAAGAAATAGTCGAAGATGAATCGAAGAAGCTTGCC TACGACCATACGCACCGCAAGCTGAAGCCCAGGCATATCCAGCTTATCGGTATCGGCGGCACAATCGGGACCGTT TTGTACGTCCAGATTGGCAAAGCACTGATGGAGGGTGGCCCTGCTAGTCTCTTCATCGCATTTATTATCTGGTTA GTCTTGATCCCATCACTCTGTTCTCTTGTCTTTCGCTGTTCCCTTACGGTGCTGCAATTCCCATCTTGTGAACTG TCTCAAAAGGCGTCGTTTATTGGTAAGTTTCTGGAAGCCGAAGCACAAAGTACAGGAACTCGCTTTCGCCCAATG GTCAGCGTCTGCAAGGATGTCTTTCAACATCAGACACCTCATGCACTATACGTAGATAGCGCAGTGTCAGCTTTT CCTCCTTGTTCCTGATGTGTGCTCCACCCTAGAGGCAGCAGAATTTCGGGATTGCCTGGCCTTGCCTTGTGCATA TTGCTGCTAAATTTATGGAATCTTATACCTCGTTTATATATAGGTCCGCTGTCATTCTATGTATAACTGTTTGTA CGGATTCCCTTTCCCTGCGATCTTGAAGCCCTTCCTATCTTCCCTCATGCCGCCAGCGACACAAAAGCTGCCAAT TGCGACCTGTGCGATTTTATCTGCATGCCCCAAAGCGCCGAATTCCCAATGGCCTCTGATTCCGTCGCAACAACT TGGCTCGCGCATTTGTTCCCTTTGAAGTAGCATTCCACTAAGATAATACCTATGCTAGGTTTGGCTGAGATGGTC ACATATTTGCCCATTTCCTCGCCCTTTATCCGCTTTGCAACTCGATACGTTGACGAGGCCTTTGGGGTTGCTGCC GGTTACAACTTCTTCATCTTTCAAGCTGCCATGGTGCCATTTGAAGTTACAGCGTGTAACCTGATTATCACTTAC TGGAGCGATGCGGTCCCAGTCGCCGGAATCATTGTAATTGTGCTTGTGCTCTTTGGGTATGTTATGCTCTCGATC GAAGCATACCTCCTGTGCAACTTGAAGCAGTTCAAGCTAACAAGTATCAGGCTACTCAACATCTTCGCAGTGAAG TGGTATGGCGAAGCCGAATTCTGGCTTTCCCTGAGCAAGGTCTTGCTTAGTGTGGGCCTGATCTTCTTTACATTC ATTGTGATGCTCGGAGGCAACCCCCTTGGCGATCGATTTGGATTCCGCTACTGGAAGAACCCTGGGGCATTCAAC GAATACTACAAGACTGGAGATCTAGGCCGATGGCTCGGGTTTCTTGCTTGCCTCATCCAAGCCAGTTTCACGATC GCCGGTCCTGACTACGTCTCCATGGCTGCCGGTGAAGCAGTCAACCCCCGCAAAATCCTGCCCAAAGCATACAAT GGCATCTTCTATCGACTCACCACCTTTTTCGTTCTTGGTGTGCTCTGCGTTGGTATCTTAGTTCCCTACAACGAT CCTGACCTGGCTGCTGCGTACGAAAAAGACCTGCCTGGTGCAGCCGCATCACCGTATGTTGTCGCCATGGACCGG CTGAAAATTCCCGTCCTGCCACACATCGTCAATGCTATGGTCCTCCTCGCTGCTTTCAGTGCCGGAAACAGTTAC GTCTACTGCGCCAGCAGAAGTCTGTACGGTCTTGCTCTGGATGGCAAGGCTCCGCGCATTCTCACCAAATGTACA AAAACCGGTGTGCCAATATACTGCGTCTTGATTGTGTTCGTTTTTGCGCTGTTGGCTTTCCTACAGGTTTCTAAT GGGTCAGCTGTCGTGCTGAATTGGTTCGTTAATCTTGTGAGTCTTTTCCCATCATTTACTTCTTCCGCAAATTCT GATGAAACACAAATCAGGTCACTGCATCCCAACTGATCAACTTTTCCGTCATTACTTTCACCTACACCCGGTTCA GAAAAGCTCTCATGGCACAGGGTGTCCCTCGCACATCCCTTCCCTACCAGAGTCGTGGCCAGCCCTATGTCGCCT ACATTGCCTTAGTCTCGACTTTCGTCATGACTTTCATAAGCGGCTACACGGTCTTCTTACCTGGCAACTGGGACA TCCCGACTTTCTTCTTCTCGTATACCATGATCGGAGTGTTTCCTGTCATCTACGTGGGATGGAAACTCTGGCATC GTACGAAGTTTTTGAGCCCAAAGGAAATTGATATCGTCACTGGAGTCGAAGAAGTGGATGTGTATACGAGGAATT ATGTGGAGGAACCTTCAAGGTAGGTCTATCTGGTATACTTCTGATGGTCTGGAAACTAAGTATCGCACACAGTAA CGCTTTTACGAGATTCAACGATATGGTTTTTGGTTAA |