Protein ID | Ani_SJS72_1|g10078.t1 |
Gene name | |
Location | scaffold_124:3193..5520 |
Strand | - |
Gene length (bp) | 2327 |
Transcript length (bp) | 2202 |
Coding sequence length (bp) | 2202 |
Protein length (aa) | 734 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09402 | MSC | Man1-Src1p-C-terminal domain | 3.2E-110 | 350 | 674 |
PF12949 | HeH | HeH/LEM domain | 7.3E-16 | 14 | 47 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 38 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 556 | 578 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g10078.t1 MADGLEYLAPDFDLNSLTVPRLRSILVSHDVPYPASAKKAQLIGILEAEVMPQARKLLRERERVRRTSEGITDMG SRATSVASDYDDYRGTPARDSMPPPPTPSTVSTATGRRGRSRASVRASTADTEERNATATPSASSRKSIPRSQSR RYRTSDTEPQEDMLATPMATDTVTPRKSTTRKSRRSEMTPSVNPEPPVSAIKLEPKEESVFTDDNPFQSGSPARW EYKSPRPSSHKSERKSSSRFSLESSALSSGLRSRKSVTPADLHDQQGATPSKRSPFELPISNMRTPPQNFDPIKY EEDSDFSAGEEFTPDEQLALEREHADLMYSAPSRRPQKQGTTSRAAPWVILVVLFASFAAWWRKEKVEIGFCGIG KPTWSLAETRVPEWANILEPQCEPCPPHAFCYPNFEARCEHDFLLKAHPLSLGGLVPLPPTCEPDSEKARRVKAV ADKALEALRDRRAKWECGELAQDEEGTVGAEISESDLKQEVGRQRRKGMSDTEFDDLWKGALGEVIGREEVVTRM KQPSSVLTLTSTSVSRLPLTCAFRRNIRLSLVAYRFPLSILALCACVVFYARSRVRARRSDMARVPELVATTLDR LATQAALHARGAAREPYIPIGQLRDDVLRSELRGSRREALWKRVRSVVEGNANVRASVREGRGGDVARVWEWIGG IGSVRSEIESSIATGRESGKVHFSPLPAEQSRDQSVGEATLAQSPGELRKWDEGRPIY* |
Coding | >Ani_SJS72_1|g10078.t1 ATGGCGGACGGTTTGGAGTATCTCGCTCCGGATTTTGATCTTAATTCCCTTACCGTGCCGCGTCTGCGATCGATC CTTGTCAGCCATGATGTTCCCTACCCTGCCTCAGCCAAAAAGGCTCAACTTATTGGTATCTTGGAGGCGGAAGTT ATGCCGCAGGCTCGAAAGCTGCTGAGAGAGCGCGAGAGAGTCAGGAGGACCAGCGAGGGTATTACAGACATGGGA AGTCGCGCGACGTCAGTTGCTAGCGACTATGATGACTACCGCGGAACCCCGGCGAGGGATTCGATGCCACCCCCG CCTACACCGTCTACGGTATCGACAGCCACTGGCAGAAGGGGACGTTCTAGAGCTAGCGTTAGAGCGTCGACAGCG GACACAGAGGAAAGAAACGCTACGGCTACTCCATCAGCGAGCTCGAGGAAATCTATCCCCAGGTCACAATCGAGA AGATACCGCACGTCAGACACGGAGCCGCAGGAAGATATGTTGGCAACGCCTATGGCAACTGACACCGTGACACCA CGGAAGTCCACTACCAGAAAATCCAGACGCAGCGAGATGACGCCATCTGTGAACCCCGAACCTCCCGTTTCTGCC ATTAAACTTGAACCGAAAGAGGAAAGCGTTTTCACCGATGATAATCCCTTCCAGAGTGGATCGCCCGCCCGTTGG GAATACAAAAGCCCGAGGCCGTCTAGTCATAAATCGGAAAGAAAGAGCAGCTCGCGGTTTTCGCTTGAATCATCT GCCTTGAGTAGTGGTCTGCGGTCAAGAAAGTCTGTCACGCCAGCAGATCTGCACGATCAACAGGGTGCTACTCCA TCAAAACGGTCACCATTTGAGTTGCCCATCTCGAATATGAGAACGCCACCACAGAATTTCGATCCGATCAAGTAC GAGGAGGATAGTGATTTTAGTGCGGGCGAGGAATTTACACCAGACGAGCAGTTGGCGCTCGAGAGGGAGCACGCA GACTTGATGTATAGTGCCCCAAGCCGGCGGCCACAGAAACAAGGAACTACAAGCCGCGCTGCGCCTTGGGTTATT CTCGTCGTATTGTTCGCAAGTTTCGCTGCTTGGTGGCGTAAGGAGAAGGTTGAGATCGGATTCTGCGGCATTGGC AAACCCACTTGGTCCTTGGCCGAAACCAGGGTCCCTGAATGGGCCAACATCCTTGAACCTCAATGTGAACCGTGC CCACCCCATGCATTCTGCTACCCCAACTTTGAAGCTCGGTGTGAACACGACTTCTTGCTCAAGGCACACCCGCTG TCTCTGGGAGGCTTGGTTCCGCTTCCCCCCACCTGTGAGCCAGACAGCGAGAAAGCGCGTCGCGTGAAGGCTGTC GCAGATAAAGCCTTGGAAGCATTGCGTGATCGCAGGGCGAAGTGGGAGTGTGGTGAGCTGGCGCAGGATGAAGAA GGCACAGTCGGTGCGGAAATTAGCGAATCTGACTTGAAACAGGAAGTGGGGAGACAACGTCGGAAAGGCATGAGT GACACTGAATTTGATGACCTTTGGAAGGGAGCTCTGGGCGAAGTGATTGGGAGGGAGGAGGTTGTGACCAGAATG AAGCAACCATCCTCTGTCCTCACCCTCACCTCGACCTCCGTCAGCCGTCTCCCTCTCACATGCGCCTTCCGCCGC AACATCCGACTCTCTCTCGTCGCGTATCGATTCCCTCTTTCGATTTTAGCTCTCTGCGCATGTGTAGTCTTCTAC GCACGCTCAAGGGTCCGGGCTCGCCGTTCTGACATGGCTCGAGTCCCGGAATTAGTCGCTACCACACTCGACCGG TTGGCGACGCAAGCTGCCCTTCACGCTCGGGGTGCTGCTCGCGAGCCCTATATTCCCATTGGTCAATTGCGCGAC GATGTACTCCGCTCAGAACTGCGTGGCAGTCGGCGCGAAGCATTGTGGAAGCGCGTTCGCAGTGTAGTGGAGGGC AATGCGAACGTTCGCGCATCAGTTCGCGAGGGCCGTGGTGGGGATGTTGCTCGCGTCTGGGAGTGGATCGGTGGG ATTGGCAGTGTCCGGAGTGAGATCGAGAGCAGCATTGCAACAGGCCGTGAGAGCGGTAAAGTGCATTTTTCCCCA CTACCTGCCGAGCAGAGCCGTGATCAATCCGTTGGAGAGGCCACGCTGGCGCAGAGCCCAGGAGAATTGCGCAAA TGGGATGAGGGCAGACCTATCTACTGA |
Transcript | >Ani_SJS72_1|g10078.t1 ATGGCGGACGGTTTGGAGTATCTCGCTCCGGATTTTGATCTTAATTCCCTTACCGTGCCGCGTCTGCGATCGATC CTTGTCAGCCATGATGTTCCCTACCCTGCCTCAGCCAAAAAGGCTCAACTTATTGGTATCTTGGAGGCGGAAGTT ATGCCGCAGGCTCGAAAGCTGCTGAGAGAGCGCGAGAGAGTCAGGAGGACCAGCGAGGGTATTACAGACATGGGA AGTCGCGCGACGTCAGTTGCTAGCGACTATGATGACTACCGCGGAACCCCGGCGAGGGATTCGATGCCACCCCCG CCTACACCGTCTACGGTATCGACAGCCACTGGCAGAAGGGGACGTTCTAGAGCTAGCGTTAGAGCGTCGACAGCG GACACAGAGGAAAGAAACGCTACGGCTACTCCATCAGCGAGCTCGAGGAAATCTATCCCCAGGTCACAATCGAGA AGATACCGCACGTCAGACACGGAGCCGCAGGAAGATATGTTGGCAACGCCTATGGCAACTGACACCGTGACACCA CGGAAGTCCACTACCAGAAAATCCAGACGCAGCGAGATGACGCCATCTGTGAACCCCGAACCTCCCGTTTCTGCC ATTAAACTTGAACCGAAAGAGGAAAGCGTTTTCACCGATGATAATCCCTTCCAGAGTGGATCGCCCGCCCGTTGG GAATACAAAAGCCCGAGGCCGTCTAGTCATAAATCGGAAAGAAAGAGCAGCTCGCGGTTTTCGCTTGAATCATCT GCCTTGAGTAGTGGTCTGCGGTCAAGAAAGTCTGTCACGCCAGCAGATCTGCACGATCAACAGGGTGCTACTCCA TCAAAACGGTCACCATTTGAGTTGCCCATCTCGAATATGAGAACGCCACCACAGAATTTCGATCCGATCAAGTAC GAGGAGGATAGTGATTTTAGTGCGGGCGAGGAATTTACACCAGACGAGCAGTTGGCGCTCGAGAGGGAGCACGCA GACTTGATGTATAGTGCCCCAAGCCGGCGGCCACAGAAACAAGGAACTACAAGCCGCGCTGCGCCTTGGGTTATT CTCGTCGTATTGTTCGCAAGTTTCGCTGCTTGGTGGCGTAAGGAGAAGGTTGAGATCGGATTCTGCGGCATTGGC AAACCCACTTGGTCCTTGGCCGAAACCAGGGTCCCTGAATGGGCCAACATCCTTGAACCTCAATGTGAACCGTGC CCACCCCATGCATTCTGCTACCCCAACTTTGAAGCTCGGTGTGAACACGACTTCTTGCTCAAGGCACACCCGCTG TCTCTGGGAGGCTTGGTTCCGCTTCCCCCCACCTGTGAGCCAGACAGCGAGAAAGCGCGTCGCGTGAAGGCTGTC GCAGATAAAGCCTTGGAAGCATTGCGTGATCGCAGGGCGAAGTGGGAGTGTGGTGAGCTGGCGCAGGATGAAGAA GGCACAGTCGGTGCGGAAATTAGCGAATCTGACTTGAAACAGGAAGTGGGGAGACAACGTCGGAAAGGCATGAGT GACACTGAATTTGATGACCTTTGGAAGGGAGCTCTGGGCGAAGTGATTGGGAGGGAGGAGGTTGTGACCAGAATG AAGCAACCATCCTCTGTCCTCACCCTCACCTCGACCTCCGTCAGCCGTCTCCCTCTCACATGCGCCTTCCGCCGC AACATCCGACTCTCTCTCGTCGCGTATCGATTCCCTCTTTCGATTTTAGCTCTCTGCGCATGTGTAGTCTTCTAC GCACGCTCAAGGGTCCGGGCTCGCCGTTCTGACATGGCTCGAGTCCCGGAATTAGTCGCTACCACACTCGACCGG TTGGCGACGCAAGCTGCCCTTCACGCTCGGGGTGCTGCTCGCGAGCCCTATATTCCCATTGGTCAATTGCGCGAC GATGTACTCCGCTCAGAACTGCGTGGCAGTCGGCGCGAAGCATTGTGGAAGCGCGTTCGCAGTGTAGTGGAGGGC AATGCGAACGTTCGCGCATCAGTTCGCGAGGGCCGTGGTGGGGATGTTGCTCGCGTCTGGGAGTGGATCGGTGGG ATTGGCAGTGTCCGGAGTGAGATCGAGAGCAGCATTGCAACAGGCCGTGAGAGCGGTAAAGTGCATTTTTCCCCA CTACCTGCCGAGCAGAGCCGTGATCAATCCGTTGGAGAGGCCACGCTGGCGCAGAGCCCAGGAGAATTGCGCAAA TGGGATGAGGGCAGACCTATCTACTGA |
Gene | >Ani_SJS72_1|g10078.t1 ATGGCGGACGGTTTGGAGTATCTCGCTCCGGATTTTGATCTTAATTCCCTTACCGTGCCGCGTCTGCGATCGATC CTTGTCAGCCATGATGTTCCCTACCCTGCCTCAGCCAAAAAGGCTCAACTTATTGGTATCTTGGAGGCGGAAGTT ATGCCGCAGGCTCGAAAGCTGCTGAGAGAGCGCGAGAGAGTCAGGAGGACCAGCGAGGGTATTACAGACATGGGA AGTCGCGCGACGTCAGTTGCTAGCGACTATGATGACTACCGCGGAACCCCGGCGAGGGATTCGATGCCACCCCCG CCTACACCGTCTACGGTATCGACAGCCACTGGCAGAAGGGGACGTTCTAGAGCTAGCGTTAGAGCGTCGACAGCG GACACAGAGGAAAGAAACGCTACGGCTACTCCATCAGCGAGCTCGAGGAAATCTATCCCCAGGTCACAATCGAGA AGATACCGCACGTCAGACACGGAGCCGCAGGAAGATATGTTGGCAACGCCTATGGCAACTGACACCGTGACACCA CGGAAGTCCACTACCAGAAAATCCAGACGCAGCGAGATGACGCCATCTGTGAACCCCGAACCTCCCGTTTCTGCC ATTAAACTTGAACCGAAAGAGGAAAGCGTTTTCACCGATGATAATCCCTTCCAGAGTGGATCGCCCGCCCGTTGG GAATACAAAAGCCCGAGGCCGTCTAGTCATAAATCGGAAAGAAAGAGCAGCTCGCGGTTTTCGCTTGAATCATCT GCCTTGAGTAGTGGTCTGCGGTCAAGAAAGTCTGTCACGCCAGCAGATCTGCACGATCAACAGGGTGCTACTCCA TCAAAACGGTCACCATTTGAGTTGCCCATCTCGAATATGAGAACGCCACCACAGAATTTCGATCCGATCAAGTAC GAGGAGGATAGTGATTTTAGTGCGGGCGAGGAATTTACACCAGACGAGCAGTTGGCGCTCGAGAGGGAGCACGCA GACTTGATGTATAGTGCCCCAAGCCGGCGGCCACAGAAACAAGGAACTACAAGCCGCGCTGCGCCTTGGGTTATT CTCGTCGTATTGTTCGCAAGTTTCGCTGCTTGGTGGCGTAAGGAGAAGGTTGAGATCGGATTCTGCGGCATTGGC AAACCCACTTGGTCCTTGGCCGAAACCAGGGTCCCTGAATGGGCCAACATCCTTGAACCTCAATGTGAACCGTGC CCACCCCATGCATTCTGCTACCCCAACTTTGAAGCTCGGTGTGAACACGACTTCTTGCTCAAGGCACACCCGCTG TCTCTGGGAGGCTTGGTTCCGCTTCCCCCCACCTGTGAGCCAGACAGCGAGAAAGCGCGTCGCGTGAAGGCTGTC GCAGATAAAGCCTTGGAAGCATTGCGTGATCGCAGGGCGAAGTGGGAGTGTGGTGAGCTGGCGCAGGATGAAGAA GGCACAGTCGGTGCGGAAATTAGCGAATCTGACTTGAAACAGGAAGTGGGGAGACAACGTCGGAAAGGCATGAGT GACACTGAATTTGATGACCTTTGGAAGGGAGCTCTGGGCGAAGTGATTGGGAGGGAGGAGGTTGTGACCAGAATG AAGCAGTAAGTCGATCAACTTTCTTAATCTGGAGGCTTTATCGCACCTGCCCGGAACCTATGGTGGCACCGAAGG AATCAGATTCTGACGTGTATTCACGGCACTAACAGAGGCGACAACATGATTACAGACCATCCTCTGTCCTCACCC TCACCTCGACCTCCGTCAGCCGTCTCCCTCTCACATGCGCCTTCCGCCGCAACATCCGACTCTCTCTCGTCGCGT ATCGATTCCCTCTTTCGATTTTAGCTCTCTGCGCATGTGTAGTCTTCTACGCACGCTCAAGGGTCCGGGCTCGCC GTTCTGACATGGCTCGAGTCCCGGAATTAGTCGCTACCACACTCGACCGGTTGGCGACGCAAGCTGCCCTTCACG CTCGGGGTGCTGCTCGCGAGCCCTATATTCCCATTGGTCAATTGCGCGACGATGTACTCCGCTCAGAACTGCGTG GCAGTCGGCGCGAAGCATTGTGGAAGCGCGTTCGCAGTGTAGTGGAGGGCAATGCGAACGTTCGCGCATCAGTTC GCGAGGGCCGTGGTGGGGATGTTGCTCGCGTCTGGGAGTGGATCGGTGGGATTGGCAGTGTCCGGAGTGAGATCG AGAGCAGCATTGCAACAGGCCGTGAGAGCGGTAAAGTGCATTTTTCCCCACTACCTGCCGAGCAGAGCCGTGATC AATCCGTTGGAGAGGCCACGCTGGCGCAGAGCCCAGGAGAATTGCGCAAATGGGATGAGGGCAGACCTATCTACT GA |