© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g10042.t1 |
| Gene name | |
| Location | scaffold_122:56984..58278 |
| Strand | - |
| Gene length (bp) | 1294 |
| Transcript length (bp) | 1230 |
| Coding sequence length (bp) | 1230 |
| Protein length (aa) | 410 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16499 | Melibiase_2 | Alpha galactosidase A | 2.9E-57 | 35 | 320 |
| PF17801 | Melibiase_C | Alpha galactosidase C-terminal beta sandwich domain | 7.5E-09 | 337 | 406 |
| PF02065 | Melibiase | Melibiase | 1.1E-07 | 32 | 119 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g10042.t1 MMKRKSQLSSFTLVTAAILPFAHLVMGGTSLAQKPQMGWNSWNAFKATVNYTIVQEVISLFDTLGLKEAGYEYVL LDDGWASYNRTSDGYLQANATSFPQGIKALAQEVHGKGLKLGLYGDSGHYTCAWRPGSWGYEERDAQTFAGWGVD YLKYDNCGGFQSMTEAPQIRFGAMKNALALSGRDIFYSVCGWGYQFPWHWGGDIGHSYRMSGDITTSFTNETECQ CKTAYCLNTGYAGCSVLTIINKMKEISQYQTPGHWLDMDMLEVGNANFTLNQQQTHFAFWAALKSPLIIGADLSK LSNDSLAVLTNKAIISINQDALGEPVTYREAHSKEGLFQVWAGKIEDGYVVLLLNEKSYPQTVSLTFASLGLGSP QKVIELWSGQTLQDFSKFNGVLGSYQTLVFKVKT* |
| Coding | >Ani_SJS72_1|g10042.t1 ATGATGAAACGCAAATCTCAGCTGTCATCATTCACCTTAGTGACGGCGGCAATTTTACCTTTTGCCCATCTTGTG ATGGGAGGCACAAGTCTCGCACAAAAGCCTCAGATGGGCTGGAACTCATGGAACGCATTCAAAGCGACGGTCAAC TATACGATAGTTCAAGAAGTTATTTCGCTGTTCGATACGCTTGGGCTGAAAGAGGCGGGCTACGAGTACGTGCTG CTTGATGATGGATGGGCAAGTTACAATCGCACGTCCGACGGGTATCTTCAAGCCAATGCAACATCCTTTCCTCAG GGTATTAAGGCACTGGCGCAAGAGGTGCACGGTAAGGGCCTAAAACTAGGCCTTTATGGAGATAGTGGTCATTAC ACCTGTGCGTGGAGACCGGGAAGCTGGGGATACGAAGAGCGAGACGCTCAAACGTTCGCGGGCTGGGGCGTCGAC TACCTCAAGTACGACAATTGTGGCGGATTTCAGTCGATGACAGAGGCCCCTCAAATACGCTTTGGGGCAATGAAG AATGCTCTCGCGCTTTCGGGTCGAGATATCTTCTATTCCGTGTGTGGGTGGGGTTATCAGTTTCCCTGGCACTGG GGAGGAGATATCGGTCACTCATACAGAATGTCAGGCGACATTACAACAAGCTTCACCAACGAAACTGAGTGCCAG TGCAAGACCGCCTACTGTCTCAATACCGGGTATGCCGGTTGCTCAGTACTGACCATCATCAACAAAATGAAAGAA ATCAGCCAATATCAGACGCCAGGTCATTGGTTGGATATGGACATGCTAGAAGTCGGAAATGCAAATTTCACACTC AACCAGCAGCAGACGCACTTTGCATTCTGGGCGGCGCTGAAGTCTCCCTTGATCATTGGTGCTGATCTCAGCAAG CTCTCCAATGACAGTTTAGCTGTTCTCACCAACAAGGCTATCATTTCGATCAATCAAGACGCGCTGGGGGAGCCT GTGACGTATCGCGAAGCACATAGCAAAGAAGGTCTCTTCCAGGTATGGGCTGGGAAGATTGAGGACGGATATGTT GTTCTGCTGCTGAATGAGAAAAGCTATCCGCAAACTGTGTCTCTGACCTTTGCCAGTTTGGGACTTGGCTCACCT CAGAAGGTCATTGAACTTTGGTCGGGGCAGACTTTGCAGGATTTTAGTAAGTTCAATGGGGTTCTGGGGTCTTAT CAAACTCTTGTTTTCAAAGTGAAGACATGA |
| Transcript | >Ani_SJS72_1|g10042.t1 ATGATGAAACGCAAATCTCAGCTGTCATCATTCACCTTAGTGACGGCGGCAATTTTACCTTTTGCCCATCTTGTG ATGGGAGGCACAAGTCTCGCACAAAAGCCTCAGATGGGCTGGAACTCATGGAACGCATTCAAAGCGACGGTCAAC TATACGATAGTTCAAGAAGTTATTTCGCTGTTCGATACGCTTGGGCTGAAAGAGGCGGGCTACGAGTACGTGCTG CTTGATGATGGATGGGCAAGTTACAATCGCACGTCCGACGGGTATCTTCAAGCCAATGCAACATCCTTTCCTCAG GGTATTAAGGCACTGGCGCAAGAGGTGCACGGTAAGGGCCTAAAACTAGGCCTTTATGGAGATAGTGGTCATTAC ACCTGTGCGTGGAGACCGGGAAGCTGGGGATACGAAGAGCGAGACGCTCAAACGTTCGCGGGCTGGGGCGTCGAC TACCTCAAGTACGACAATTGTGGCGGATTTCAGTCGATGACAGAGGCCCCTCAAATACGCTTTGGGGCAATGAAG AATGCTCTCGCGCTTTCGGGTCGAGATATCTTCTATTCCGTGTGTGGGTGGGGTTATCAGTTTCCCTGGCACTGG GGAGGAGATATCGGTCACTCATACAGAATGTCAGGCGACATTACAACAAGCTTCACCAACGAAACTGAGTGCCAG TGCAAGACCGCCTACTGTCTCAATACCGGGTATGCCGGTTGCTCAGTACTGACCATCATCAACAAAATGAAAGAA ATCAGCCAATATCAGACGCCAGGTCATTGGTTGGATATGGACATGCTAGAAGTCGGAAATGCAAATTTCACACTC AACCAGCAGCAGACGCACTTTGCATTCTGGGCGGCGCTGAAGTCTCCCTTGATCATTGGTGCTGATCTCAGCAAG CTCTCCAATGACAGTTTAGCTGTTCTCACCAACAAGGCTATCATTTCGATCAATCAAGACGCGCTGGGGGAGCCT GTGACGTATCGCGAAGCACATAGCAAAGAAGGTCTCTTCCAGGTATGGGCTGGGAAGATTGAGGACGGATATGTT GTTCTGCTGCTGAATGAGAAAAGCTATCCGCAAACTGTGTCTCTGACCTTTGCCAGTTTGGGACTTGGCTCACCT CAGAAGGTCATTGAACTTTGGTCGGGGCAGACTTTGCAGGATTTTAGTAAGTTCAATGGGGTTCTGGGGTCTTAT CAAACTCTTGTTTTCAAAGTGAAGACATGA |
| Gene | >Ani_SJS72_1|g10042.t1 ATGATGAAACGCAAATCTCAGCTGTCATCATTCACCTTAGTGACGGCGGCAATTTTACCTTTTGCCCATCTTGTG ATGGGAGGCACAAGTCTCGCACAAAAGCCTCAGATGGGCTGGAACTCATGGAACGCATTCAAAGCGACGGTCAAC TATACGATAGTTCAAGAAGTTATTTCGCTGTTCGATACGCTTGGGCTGAAAGAGGCGGGCTACGAGTACGTGCTG CTTGATGATGGATGGGCAAGTTACAATCGCACGTCCGACGGGTATCTTCAAGCCAATGCAACATCCTTTCCTCAG GGTATTAAGGCACTGGCGCAAGAGGTGCACGGTAAGGGCCTAAAACTAGGCCTTTATGGAGATAGTGGTCATTAC ACCTGTGCGTGGAGACCGGGAAGCTGGGGATACGAAGAGCGAGACGCTCAAACGTTCGCGGGCTGGGGCGTCGAC TACCTCAAGTACGACAATTGTGGCGGATTTCAGTCGATGACAGAGGCCCCTCAAATACGCTTTGGGGCAATGAAG AATGCTCTCGCGCTTTCGGGTCGAGATATCTTCTATTCCGTGTGTGGGTGGGGTTATCAGTTTCCCTGGCACTGG GGAGGAGGTGAGATACACCCCGCAAATCAACCAATCTTCTACCTTAAGATACTCATTCCACCTGCCTGCAGATAT CGGTCACTCATACAGAATGTCAGGCGACATTACAACAAGCTTCACCAACGAAACTGAGTGCCAGTGCAAGACCGC CTACTGTCTCAATACCGGGTATGCCGGTTGCTCAGTACTGACCATCATCAACAAAATGAAAGAAATCAGCCAATA TCAGACGCCAGGTCATTGGTTGGATATGGACATGCTAGAAGTCGGAAATGCAAATTTCACACTCAACCAGCAGCA GACGCACTTTGCATTCTGGGCGGCGCTGAAGTCTCCCTTGATCATTGGTGCTGATCTCAGCAAGCTCTCCAATGA CAGTTTAGCTGTTCTCACCAACAAGGCTATCATTTCGATCAATCAAGACGCGCTGGGGGAGCCTGTGACGTATCG CGAAGCACATAGCAAAGAAGGTCTCTTCCAGGTATGGGCTGGGAAGATTGAGGACGGATATGTTGTTCTGCTGCT GAATGAGAAAAGCTATCCGCAAACTGTGTCTCTGACCTTTGCCAGTTTGGGACTTGGCTCACCTCAGAAGGTCAT TGAACTTTGGTCGGGGCAGACTTTGCAGGATTTTAGTAAGTTCAATGGGGTTCTGGGGTCTTATCAAACTCTTGT TTTCAAAGTGAAGACATGA |