Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g10033.t1
Gene name
Locationscaffold_122:35746..36264
Strand+
Gene length (bp)518
Transcript length (bp)447
Coding sequence length (bp)447
Protein length (aa) 149

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01042 Ribonuc_L-PSP Endoribonuclease L-PSP 2.6E-10 20 145

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g10033.t1
MSPIPSYSRPGRGQHFQDAYGFAEACIAGDRMEIAGQTGMSPTSTEVPPTLEEEVAQAFNNINEVILYTLEKAKP
DLRASVKSGWDRVVKIRTYHVQLPQTREKIIGLMVENVKKWCPDHQPTWTMLGIEALPFEGQNLEIEVDVFLG*
Coding >Ani_SJS72_1|g10033.t1
ATGTCCCCAATCCCCAGCTACTCCCGCCCCGGCCGCGGCCAACACTTCCAAGATGCCTACGGCTTCGCCGAAGCC
TGCATAGCCGGAGACCGAATGGAAATAGCCGGCCAGACCGGCATGTCCCCCACATCAACCGAAGTCCCACCCACC
CTCGAAGAAGAAGTCGCGCAAGCATTCAACAACATCAACGAAGTTATCCTCTACACACTAGAGAAAGCCAAGCCC
GATCTGCGCGCTAGCGTCAAGAGCGGCTGGGACCGCGTCGTGAAGATCCGCACGTACCATGTCCAGTTGCCCCAG
ACCCGGGAGAAGATTATCGGCCTAATGGTAGAGAATGTTAAGAAGTGGTGTCCGGATCATCAGCCTACTTGGACT
ATGTTGGGGATTGAGGCCTTGCCGTTTGAAGGGCAGAATTTGGAGATTGAGGTGGATGTTTTCTTGGGGTGA
Transcript >Ani_SJS72_1|g10033.t1
ATGTCCCCAATCCCCAGCTACTCCCGCCCCGGCCGCGGCCAACACTTCCAAGATGCCTACGGCTTCGCCGAAGCC
TGCATAGCCGGAGACCGAATGGAAATAGCCGGCCAGACCGGCATGTCCCCCACATCAACCGAAGTCCCACCCACC
CTCGAAGAAGAAGTCGCGCAAGCATTCAACAACATCAACGAAGTTATCCTCTACACACTAGAGAAAGCCAAGCCC
GATCTGCGCGCTAGCGTCAAGAGCGGCTGGGACCGCGTCGTGAAGATCCGCACGTACCATGTCCAGTTGCCCCAG
ACCCGGGAGAAGATTATCGGCCTAATGGTAGAGAATGTTAAGAAGTGGTGTCCGGATCATCAGCCTACTTGGACT
ATGTTGGGGATTGAGGCCTTGCCGTTTGAAGGGCAGAATTTGGAGATTGAGGTGGATGTTTTCTTGGGGTGA
Gene >Ani_SJS72_1|g10033.t1
ATGTCCCCAATCCCCAGCTACTCCCGCCCCGGCCGCGGCCAACACTTCCAAGATGCCTACGGCTTCGCCGAAGCC
TGCATAGCCGGAGACCGAATGGAAATAGCCGGCCAGAGTGAGCCACCATCTCCTTTCCCTCCATTTCCCTCATCA
CCAACTAATCCAATCCCCCCCTCAACAAACTAGCCGGCATGTCCCCCACATCAACCGAAGTCCCACCCACCCTCG
AAGAAGAAGTCGCGCAAGCATTCAACAACATCAACGAAGTTATCCTCTACACACTAGAGAAAGCCAAGCCCGATC
TGCGCGCTAGCGTCAAGAGCGGCTGGGACCGCGTCGTGAAGATCCGCACGTACCATGTCCAGTTGCCCCAGACCC
GGGAGAAGATTATCGGCCTAATGGTAGAGAATGTTAAGAAGTGGTGTCCGGATCATCAGCCTACTTGGACTATGT
TGGGGATTGAGGCCTTGCCGTTTGAAGGGCAGAATTTGGAGATTGAGGTGGATGTTTTCTTGGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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