Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain40
Total domain count42
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ani_SJS72_1|g10378.t1 PF00270 DEAD DEAD/DEAH box helicase 5.0E-41 51 224
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 65 186
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-29 261 426
Ani_SJS72_1|g11113.t1 PF04851 ResIII Type III restriction enzyme, res subunit 5.4E-05 374 542
PF00176 SNF2-rel_dom SNF2-related domain 1.4E-61 378 674
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.1E-07 708 754
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.5E-07 710 750
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 1.6E-06 710 750
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-13 875 983
Ani_SJS72_1|g1153.t1 PF04851 ResIII Type III restriction enzyme, res subunit 6.8E-06 127 244
PF00271 Helicase_C Helicase conserved C-terminal domain 6.3E-15 414 520
PF03368 Dicer_dimer Dicer dimerisation domain 5.0E-22 571 657
PF00636 Ribonuclease_3 Ribonuclease III domain 2.9E-20 1010 1122
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 2.3E-11 1188 1338
PF00636 Ribonuclease_3 Ribonuclease III domain 1.5E-18 1210 1323
Ani_SJS72_1|g1230.t1 PF00270 DEAD DEAD/DEAH box helicase 1.1E-41 171 367
PF04851 ResIII Type III restriction enzyme, res subunit 8.7E-06 174 321
PF00271 Helicase_C Helicase conserved C-terminal domain 2.6E-18 504 575
PF13959 DUF4217 Domain of unknown function (DUF4217) 9.2E-20 638 698
Ani_SJS72_1|g1307.t1 PF13086 AAA_11 AAA domain 1.2E-66 242 457
PF13604 AAA_30 AAA domain 4.0E-11 242 453
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-05 243 424
PF13245 AAA_19 AAA domain 1.3E-09 247 454
PF09848 DUF2075 Schlafen group 3, DNA/RNA helicase domain 1.8E-05 259 430
PF13087 AAA_12 AAA domain 2.2E-56 484 689
Ani_SJS72_1|g1380.t1 PF00176 SNF2-rel_dom SNF2-related domain 1.5E-12 54 205
PF04851 ResIII Type III restriction enzyme, res subunit 8.9E-05 57 212
Ani_SJS72_1|g1460.t1 PF07647 SAM_2 SAM domain (Sterile alpha motif) 3.7E-05 45 87
PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-05 957 1157
PF00176 SNF2-rel_dom SNF2-related domain 6.4E-46 977 1289
PF00271 Helicase_C Helicase conserved C-terminal domain 4.3E-19 1357 1467
Ani_SJS72_1|g18.t1 PF00270 DEAD DEAD/DEAH box helicase 5.0E-15 335 484
PF04851 ResIII Type III restriction enzyme, res subunit 7.3E-21 335 478
PF00271 Helicase_C Helicase conserved C-terminal domain 5.2E-19 690 796
Ani_SJS72_1|g2153.t1 PF04851 ResIII Type III restriction enzyme, res subunit 4.5E-05 367 507
PF00270 DEAD DEAD/DEAH box helicase 6.8E-26 370 542
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-11 605 712
PF09369 MZB MrfA Zn-binding domain 1.2E-16 1004 1123
Ani_SJS72_1|g2208.t1 PF04851 ResIII Type III restriction enzyme, res subunit 4.8E-10 196 356
PF00176 SNF2-rel_dom SNF2-related domain 2.5E-81 201 480
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-17 502 615
PF09110 HAND HAND 3.8E-39 766 871
PF09111 SLIDE SLIDE 1.0E-44 929 1044
Ani_SJS72_1|g2265.t1 PF00270 DEAD DEAD/DEAH box helicase 3.5E-17 278 382
PF04851 ResIII Type III restriction enzyme, res subunit 4.4E-06 292 472
PF00270 DEAD DEAD/DEAH box helicase 1.8E-15 428 525
PF00271 Helicase_C Helicase conserved C-terminal domain 2.7E-18 686 785
Ani_SJS72_1|g2329.t1 PF00270 DEAD DEAD/DEAH box helicase 3.5E-24 208 430
PF04851 ResIII Type III restriction enzyme, res subunit 7.3E-05 232 321
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-23 502 601
Ani_SJS72_1|g2666.t1 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 8.8E-36 91 215
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-13 329 484
PF00176 SNF2-rel_dom SNF2-related domain 8.7E-10 346 493
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 5.8E-127 510 747
PF00271 Helicase_C Helicase conserved C-terminal domain 5.7E-13 557 660
Ani_SJS72_1|g2742.t1 PF04851 ResIII Type III restriction enzyme, res subunit 4.1E-09 281 452
PF00176 SNF2-rel_dom SNF2-related domain 1.7E-61 285 583
PF00271 Helicase_C Helicase conserved C-terminal domain 2.6E-14 620 733
Ani_SJS72_1|g3101.t1 PF00270 DEAD DEAD/DEAH box helicase 5.7E-46 50 214
PF04851 ResIII Type III restriction enzyme, res subunit 8.8E-07 52 208
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-30 251 359
Ani_SJS72_1|g3128.t1 PF04851 ResIII Type III restriction enzyme, res subunit 7.8E-09 577 740
PF00176 SNF2-rel_dom SNF2-related domain 8.9E-54 597 872
PF00271 Helicase_C Helicase conserved C-terminal domain 3.0E-18 942 1054
Ani_SJS72_1|g3969.t1 PF00270 DEAD DEAD/DEAH box helicase 6.2E-16 814 972
PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-11 816 971
PF00271 Helicase_C Helicase conserved C-terminal domain 7.1E-06 1315 1387
Ani_SJS72_1|g4023.t1 PF04851 ResIII Type III restriction enzyme, res subunit 7.3E-05 426 616
PF00176 SNF2-rel_dom SNF2-related domain 3.6E-72 429 748
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-18 773 881
Ani_SJS72_1|g4031.t1 PF00270 DEAD DEAD/DEAH box helicase 1.8E-47 102 272
PF04851 ResIII Type III restriction enzyme, res subunit 4.2E-07 121 266
PF00271 Helicase_C Helicase conserved C-terminal domain 3.3E-30 312 425
Ani_SJS72_1|g427.t1 PF08658 Rad54_N Rad54 N terminal 5.7E-58 39 209
PF04851 ResIII Type III restriction enzyme, res subunit 6.3E-06 229 408
PF00176 SNF2-rel_dom SNF2-related domain 6.0E-60 236 540
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-14 585 690
Ani_SJS72_1|g442.t1 PF04142 Nuc_sug_transp Nucleotide-sugar transporter 5.6E-80 16 371
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-12 526 682
PF00270 DEAD DEAD/DEAH box helicase 1.0E-22 531 683
PF02889 Sec63 Sec63 Brl domain 8.9E-24 769 1052
Ani_SJS72_1|g4462.t1 PF00270 DEAD DEAD/DEAH box helicase 2.1E-47 71 240
PF04851 ResIII Type III restriction enzyme, res subunit 3.2E-07 84 233
PF00271 Helicase_C Helicase conserved C-terminal domain 2.5E-22 278 387
PF13959 DUF4217 Domain of unknown function (DUF4217) 1.6E-22 429 489
Ani_SJS72_1|g466.t1 PF04851 ResIII Type III restriction enzyme, res subunit 2.8E-06 484 666
PF00176 SNF2-rel_dom SNF2-related domain 2.4E-73 495 802
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 3.8E-08 838 895
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 8.5E-09 840 868
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.8E-06 841 891
PF13445 zf-RING_UBOX RING-type zinc-finger 1.1E-05 841 889
PF00271 Helicase_C Helicase conserved C-terminal domain 9.6E-15 1014 1126
Ani_SJS72_1|g4975.t1 PF18149 Helicase_PWI N-terminal helicase PWI domain 1.6E-29 300 413
PF00270 DEAD DEAD/DEAH box helicase 1.1E-27 538 713
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-12 549 712
PF00271 Helicase_C Helicase conserved C-terminal domain 4.2E-07 773 916
PF02889 Sec63 Sec63 Brl domain 2.8E-94 1038 1344
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-07 1382 1515
PF00270 DEAD DEAD/DEAH box helicase 5.3E-19 1389 1538
PF02889 Sec63 Sec63 Brl domain 2.1E-71 1873 2194
Ani_SJS72_1|g5056.t1 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-06 345 551
PF00176 SNF2-rel_dom SNF2-related domain 9.8E-73 350 696
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-15 906 1016
Ani_SJS72_1|g5601.t1 PF07529 HSA HSA domain 2.5E-10 340 403
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-09 838 997
PF00176 SNF2-rel_dom SNF2-related domain 5.3E-69 856 1139
PF00271 Helicase_C Helicase conserved C-terminal domain 8.0E-19 1387 1499
Ani_SJS72_1|g5781.t1 PF08880 QLQ QLQ 8.4E-14 148 182
PF07529 HSA HSA domain 1.4E-18 375 445
PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-09 547 706
PF00176 SNF2-rel_dom SNF2-related domain 6.7E-79 550 843
PF00271 Helicase_C Helicase conserved C-terminal domain 6.8E-19 867 980
PF14619 SnAC Snf2-ATP coupling, chromatin remodelling complex 4.0E-15 1072 1141
PF00439 Bromodomain Bromodomain 7.6E-26 1267 1343
Ani_SJS72_1|g5788.t1 PF13892 DBINO DNA-binding domain 4.8E-49 575 705
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-06 822 990
PF00176 SNF2-rel_dom SNF2-related domain 1.1E-66 840 1125
PF00271 Helicase_C Helicase conserved C-terminal domain 6.9E-19 1407 1519
Ani_SJS72_1|g585.t1 PF00176 SNF2-rel_dom SNF2-related domain 5.0E-72 298 622
PF04851 ResIII Type III restriction enzyme, res subunit 1.9E-07 354 498
PF00270 DEAD DEAD/DEAH box helicase 6.2E-06 357 479
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-11 734 844
Ani_SJS72_1|g7052.t1 PF04851 ResIII Type III restriction enzyme, res subunit 4.9E-06 243 415
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-51 260 528
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 1.3E-06 613 727
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-19 622 734
PF14773 VIGSSK Helicase-associated putative binding domain, C-terminal 1.9E-28 853 914
Ani_SJS72_1|g7616.t1 PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-08 140 328
PF00270 DEAD DEAD/DEAH box helicase 1.3E-16 152 329
PF00271 Helicase_C Helicase conserved C-terminal domain 3.8E-07 483 558
PF20470 HTH_61 Helix-turn-helix domain 1.2E-25 563 654
Ani_SJS72_1|g7677.t1 PF00270 DEAD DEAD/DEAH box helicase 1.4E-26 285 469
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-08 286 466
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-06 528 670
PF02889 Sec63 Sec63 Brl domain 3.0E-82 794 1099
PF00270 DEAD DEAD/DEAH box helicase 1.9E-22 1144 1307
PF04851 ResIII Type III restriction enzyme, res subunit 2.1E-11 1155 1276
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-06 1420 1507
PF02889 Sec63 Sec63 Brl domain 3.5E-52 1635 1965
Ani_SJS72_1|g7696.t1 PF04851 ResIII Type III restriction enzyme, res subunit 7.0E-12 18 187
PF00270 DEAD DEAD/DEAH box helicase 5.0E-16 22 154
PF00271 Helicase_C Helicase conserved C-terminal domain 9.4E-16 370 494
PF03368 Dicer_dimer Dicer dimerisation domain 5.9E-26 565 654
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 3.6E-15 947 1067
PF00636 Ribonuclease_3 Ribonuclease III domain 5.1E-24 950 1055
PF00636 Ribonuclease_3 Ribonuclease III domain 2.7E-16 1130 1276
Ani_SJS72_1|g781.t1 PF04851 ResIII Type III restriction enzyme, res subunit 3.8E-23 60 220
PF00270 DEAD DEAD/DEAH box helicase 3.1E-08 63 223
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-12 297 397
Ani_SJS72_1|g8707.t1 PF16399 Aquarius_N Intron-binding protein aquarius N-terminus 0.0E+00 16 796
PF13086 AAA_11 AAA domain 6.8E-22 800 1097
PF04851 ResIII Type III restriction enzyme, res subunit 2.3E-05 812 864
PF13087 AAA_12 AAA domain 1.3E-26 1108 1299
Ani_SJS72_1|g8866.t1 PF00270 DEAD DEAD/DEAH box helicase 1.3E-47 72 238
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-06 92 232
PF00271 Helicase_C Helicase conserved C-terminal domain 2.4E-28 275 383
Ani_SJS72_1|g8994.t1 PF00270 DEAD DEAD/DEAH box helicase 6.4E-32 171 395
PF04851 ResIII Type III restriction enzyme, res subunit 4.6E-05 191 389
PF00271 Helicase_C Helicase conserved C-terminal domain 9.3E-18 466 601
Ani_SJS72_1|g916.t1 PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-05 167 313
PF00270 DEAD DEAD/DEAH box helicase 2.5E-17 168 315
PF00271 Helicase_C Helicase conserved C-terminal domain 7.4E-06 486 565
PF13234 rRNA_proc-arch rRNA-processing arch domain 4.0E-94 619 885
PF08148 DSHCT DSHCT (NUC185) domain 5.1E-52 912 1081
Ani_SJS72_1|g9633.t1 PF00176 SNF2-rel_dom SNF2-related domain 2.7E-67 244 497
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-07 246 388
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-21 655 764
Ani_SJS72_1|g9639.t1 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 9.3E-76 64 215
PF18141 UPF1_1B_dom RNA helicase UPF1, 1B domain 1.4E-34 268 362
PF13604 AAA_30 AAA domain 5.4E-12 418 617
PF13086 AAA_11 AAA domain 5.0E-21 419 519
PF04851 ResIII Type III restriction enzyme, res subunit 5.9E-06 423 544
PF13245 AAA_19 AAA domain 2.6E-10 423 615
PF13086 AAA_11 AAA domain 1.4E-31 523 621
PF13087 AAA_12 AAA domain 2.7E-59 628 824

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