Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS6_1|g4324.t1
Gene name
Locationscaffold_027:199426..200297
Strand-
Gene length (bp)871
Transcript length (bp)600
Coding sequence length (bp)600
Protein length (aa) 200

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13185 GAF_2 GAF domain 2.1E-13 106 194
PF01590 GAF GAF domain 5.8E-09 113 194

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 25 (None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup5090
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g4324.t1 (this protein)
Aspergillus niger CBS 113.50 Ani_SJS3_1|g7115.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g327.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g2309.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g7746.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g6653.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g6010.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g2382.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g4620.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g7283.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g5045.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g4771.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g4296.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g8425.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g5011.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g667.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g2182.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g3537.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g4242.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g4809.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g3608.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g1887.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g2793.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g6401.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS6_1|g4324.t1
MPHADSSYFGAGNGSKSEVYTQVLEQARGLVYDQRNWLTNHFSHRQQVSNFSNVASLLWHAYAALPAPSSSVNWA
GFYIRQDKFPVLGAPLEEDSKKKPVLLLGPFQGRPACQEIRFGRGVCGTAAEKRETVVVPDVLNFPGHIACDASS
RSEIVVPILSKGETVAIIDIDCAEPDGFDDEDKKYLEELAALLAECCDW*
Coding >Ani_SJS6_1|g4324.t1
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGAG
CAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCC
GGCTTCTACATCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCA
GCTGAGAAGCGCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCG
GATGGATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
Transcript >Ani_SJS6_1|g4324.t1
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGAG
CAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCC
GGCTTCTACATCCGCCAGGACAAGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCA
GCTGAGAAGCGCGAGACGGTCGTCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCG
GATGGATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
Gene >Ani_SJS6_1|g4324.t1
ATGGTATAGTCTCTTTTCCAGCTGTAGCACATGTTCCTTCGAGTCATGGAATATCCGTCCACTAACATCCCCCCA
CCAGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGA
GCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGGTACGATCTTCTTACCTCTAACTCCTATCTCTCCCATA
TCCAATTCACCAGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGGTAAGAACAACTTCAACTATCGCGCCC
CCTCTCACCCAAAGAGCACAGCAACCTAACCCTCTCCAAACCAATACAGTAATTTCTCCAACGTCGCCTCCCTCC
TCTGGCACGCCTACGCTGCTCTCCCCGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACA
AGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTCCTCCTTCTCGGTCCATTCCAGG
GCCGTCCGGCATGTCAGGAGATTCGCTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCG
TCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGCCGGAGTGAGATTGTGGTGCCGA
TTTTGAGCAAGGGGGAGGTGAGTACTGGATCTATGTTATCTGTATCTAATCTAGTGGATGATGGCTGATGGTGTA
TGTTGGGCAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAAAATA
TCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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