Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS3_1|g11047.t1
Gene name
Locationscaffold_152:2449..3158
Strand-
Gene length (bp)709
Transcript length (bp)555
Coding sequence length (bp)555
Protein length (aa) 185

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00642 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2.4E-07 14 38

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0005488 binding No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup7801
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g10047.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g11047.t1 (this protein)
Aspergillus niger CBS 115988 Ani_SJS16_1|g9631.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g10830.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g6823.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g10941.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g10543.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g8963.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g3976.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g11128.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g8472.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g9829.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g11095.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g10992.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g1645.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g7515.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g11041.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g10579.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g6924.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g7566.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g11009.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g8556.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g9242.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g2516.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS3_1|g11047.t1
MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKSKMNPSQLQNHFDAF
YEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNSRCGEGCVRGGFCNFIHRKDPSNELD
RDLRLSTKKWLKERGRDARSVSRSPSPEPTRRRY*
Coding >Ani_SJS3_1|g11047.t1
ATGGCCAACTATCTCGCCTCCATCTTCGGTACAGAGCAGGACAAGGTCAACTGCTCCTTCTACTACAAAATCGGA
GCTTGCAGACATGGCGACCGCTGCTCCCGAAAGCACGTTAAGCCGTCATACTCTCAGACGATCCTGATGCCGAAC
ATGTACCAGAATCCCGCGTACGACCCCAAGAGCAAGATGAACCCCAGTCAGCTACAGAACCACTTTGATGCTTTC
TACGAGGATGTGTGGTGCGAGATGTGCAAGTACGGCGAGTTGGAGGAATTGGTTGTCTGCGATAACAACAATGAC
CACCTCATCGGAAATGTCTACGCGCGCTTCAAATACGAAGAAGATGCCCAGGCCGCCTGCGACGCTTTGAATTCA
CGGTGCGGCGAGGGATGTGTACGTGGTGGATTCTGCAACTTCATTCATCGGAAGGACCCCAGCAATGAATTGGAT
CGGGATCTTCGTCTCAGTACGAAGAAGTGGTTGAAGGAGCGTGGCAGGGATGCGAGAAGTGTCAGCCGCAGTCCT
AGTCCGGAGCCGACCCGGAGGAGGTACTAG
Transcript >Ani_SJS3_1|g11047.t1
ATGGCCAACTATCTCGCCTCCATCTTCGGTACAGAGCAGGACAAGGTCAACTGCTCCTTCTACTACAAAATCGGA
GCTTGCAGACATGGCGACCGCTGCTCCCGAAAGCACGTTAAGCCGTCATACTCTCAGACGATCCTGATGCCGAAC
ATGTACCAGAATCCCGCGTACGACCCCAAGAGCAAGATGAACCCCAGTCAGCTACAGAACCACTTTGATGCTTTC
TACGAGGATGTGTGGTGCGAGATGTGCAAGTACGGCGAGTTGGAGGAATTGGTTGTCTGCGATAACAACAATGAC
CACCTCATCGGAAATGTCTACGCGCGCTTCAAATACGAAGAAGATGCCCAGGCCGCCTGCGACGCTTTGAATTCA
CGGTGCGGCGAGGGATGTGTACGTGGTGGATTCTGCAACTTCATTCATCGGAAGGACCCCAGCAATGAATTGGAT
CGGGATCTTCGTCTCAGTACGAAGAAGTGGTTGAAGGAGCGTGGCAGGGATGCGAGAAGTGTCAGCCGCAGTCCT
AGTCCGGAGCCGACCCGGAGGAGGTACTAG
Gene >Ani_SJS3_1|g11047.t1
ATGGCCAACTATCTCGCCTCCATCTTCGGTACAGAGCAGGACAAGGTCAACTGCTCCTTCTACTACAAAATCGGA
GCTTGCAGACATGGCGACCGCTGCTCCCGAAAGCACGTTAAGCCGTCATACTCTCAGACGATCCTGATGCCGAAC
ATGTACCAGAATCCCGCGTACGACCCCAAGAGCAAGATGAACCCCAGTCAGCTACAGAACCACTTTGATGCTTTC
TACGAGGATGTGTGGTGCGAGATGTGCAAGTACGGCGAGTTGGAGGAATTGGTTGTCTGCGATAACAACAATGAC
CGTGAGTCGCATCCATTCATATCCCTTCCCCGGATAGTGGTAAGATATAGGCTAACATAGAGTTTCTTCTTCTCT
AATAGACCTCATCGGAAATGTCTACGCGCGCTTCAAATACGAAGAAGATGCCCAGGCCGCCTGCGACGCTTTGAA
TTCACGGTGGTACGCGGCACGACCTATATATTGTGAATTATCACCGGTTACAGATTTCCGAGAAGCTTGTTGTCG
GTTAAATAGCGGCGAGGGATGTGTACGTGGTGGATTCTGCAACTTCATTCATCGGAAGGACCCCAGCAATGAATT
GGATCGGGATCTTCGTCTCAGTACGAAGAAGTGGTTGAAGGAGCGTGGCAGGGATGCGAGAAGTGTCAGCCGCAG
TCCTAGTCCGGAGCCGACCCGGAGGAGGTACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail