Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS38_1|g1311.t1
Gene name
Locationscaffold_005:238650..240507
Strand-
Gene length (bp)1857
Transcript length (bp)1665
Coding sequence length (bp)1665
Protein length (aa) 555

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00867 XPG_I XPG I-region 1.2E-22 115 204
PF18380 GEN1_C Holliday junction resolvase Gen1 C-terminal domain 9.2E-22 372 477
PF00752 XPG_N XPG N-terminal domain 2.3E-06 1 90

GO

GO Term Description Terminal node
GO:0004518 nuclease activity Yes
GO:0016787 hydrolase activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup1494
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g9341.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g3306.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g9388.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g9664.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g6759.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g2291.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g4002.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g9355.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g4297.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g209.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g5254.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g1311.t1 (this protein)
Aspergillus niger CBS 147324 Ani_SJS39_1|g7.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g2339.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g8151.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g9498.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g9287.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g6400.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g9840.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g1191.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g1838.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g5951.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g6959.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g429.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS38_1|g1311.t1
MGIPGLIHAIGAGERISLSRLAITHLERTARPIRIAVDISIWLFQVQAGRGGRNPELRTLFYRLLKILALPIHPL
FVYDGKNKPPFKRGKAVSSRSYGNAPIIRLSKILVDLFKFPRHEAPGEAEAECARLQRAGVVDAVMTNDVDALMF
GSTFTVMGFSKESGSSTGAATHVTCYRMNTAGDPSSVKLNRAGMILFAMLSGGDYLPSGVPKCGSKLAGEIAKAG
FGADLLEILESDGAELDTRLSDWRERLQYELEENESGYFQTKHKVVRIPDTFPDRTILSYYANPVVSSTGDIKAL
QQYLSNAWDKDIDVVELRRFAADAFEWNYRSGARKVTRLLSEPLLSYRLRLGRQASAFPANRPRLSNCDVPMLQK
IYKSRSSYSTDGLTEYQLDMVPVDVVGLDILADEPNPPIPSQESTVSGDEEEELEDNVVSVPQSPVKKRVIKRYD
PYVSEKVWVFEALATIGLPEVVENWKREQAEKSAPKKTTTRKTGPRKKGPIDPNMKRGSILKYGTLTKERTEISR
HKSAQLLEAAVSAKATAVPSLSSSPAAID*
Coding >Ani_SJS38_1|g1311.t1
ATGGGGATTCCGGGGCTTATTCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAACTCAT
TTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACATCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGG
GGTGGTCGAAATCCGGAGCTACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATCCTCTT
TTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAGGCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCA
CCAATCATTCGGCTCTCCAAGATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAGCAGAA
GCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATGCAGTTATGACCAATGACGTTGACGCTCTAATGTTT
GGCTCAACATTCACCGTCATGGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTACCTGC
TACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGCTTAATCGTGCAGGCATGATCTTGTTTGCCATGTTA
AGTGGCGGTGATTACTTACCGTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAGCTGGC
TTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTGCCGAGCTCGATACGAGACTAAGTGATTGGAGAGAA
CGACTCCAGTATGAGTTGGAAGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTCCGGAT
ACTTTTCCCGACCGGACAATTTTGTCATATTATGCAAATCCTGTGGTTTCATCGACCGGCGATATCAAAGCCCTT
CAACAATACCTGTCAAATGCCTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACGCCTTT
GAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGATTACTTTCTGAGCCGCTTCTGTCTTACCGACTACGC
CTTGGAAGACAAGCATCGGCCTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGCAGAAA
ATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAACGGAGTATCAACTGGATATGGTTCCCGTCGACGTT
GTTGGCTTGGATATTCTTGCTGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTGACGAG
GAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAATCTCCGGTCAAAAAACGTGTCATAAAGCGCTATGAC
CCTTATGTCTCAGAGAAGGTGTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGAATTGG
AAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAACGACACGAAAGACAGGACCTCGGAAAAAGGGGCCT
ATAGACCCGAATATGAAGCGAGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATATCCCGC
CACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTAAAGCAACTGCTGTACCCAGTCTGTCGAGTTCCCCA
GCAGCCATTGACTGA
Transcript >Ani_SJS38_1|g1311.t1
ATGGGGATTCCGGGGCTTATTCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAACTCAT
TTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACATCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGG
GGTGGTCGAAATCCGGAGCTACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATCCTCTT
TTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAGGCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCA
CCAATCATTCGGCTCTCCAAGATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAGCAGAA
GCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATGCAGTTATGACCAATGACGTTGACGCTCTAATGTTT
GGCTCAACATTCACCGTCATGGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTACCTGC
TACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGCTTAATCGTGCAGGCATGATCTTGTTTGCCATGTTA
AGTGGCGGTGATTACTTACCGTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAGCTGGC
TTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTGCCGAGCTCGATACGAGACTAAGTGATTGGAGAGAA
CGACTCCAGTATGAGTTGGAAGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTCCGGAT
ACTTTTCCCGACCGGACAATTTTGTCATATTATGCAAATCCTGTGGTTTCATCGACCGGCGATATCAAAGCCCTT
CAACAATACCTGTCAAATGCCTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACGCCTTT
GAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGATTACTTTCTGAGCCGCTTCTGTCTTACCGACTACGC
CTTGGAAGACAAGCATCGGCCTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGCAGAAA
ATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAACGGAGTATCAACTGGATATGGTTCCCGTCGACGTT
GTTGGCTTGGATATTCTTGCTGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTGACGAG
GAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAATCTCCGGTCAAAAAACGTGTCATAAAGCGCTATGAC
CCTTATGTCTCAGAGAAGGTGTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGAATTGG
AAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAACGACACGAAAGACAGGACCTCGGAAAAAGGGGCCT
ATAGACCCGAATATGAAGCGAGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATATCCCGC
CACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTAAAGCAACTGCTGTACCCAGTCTGTCGAGTTCCCCA
GCAGCCATTGACTGA
Gene >Ani_SJS38_1|g1311.t1
ATGGGGATTCCGGGGTAAGTCAGCCAGTTTTGTAGGTGCTGTTTGTGGAACTTTGTCTTGAGGGAGAAATATATT
ATCCCCTTCCAGTGCGCAAACAGCACTTGTTCAATTAGTAGTTCAACAGCTAACCCACTAACCACAAAGGCTTAT
TCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAACTCATTTGGAGCGCACAGCAAGGCC
TATTCGTATTGCTGTGGACATCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGGGGTGGTCGAAATCCGGAGCT
ACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATCCTCTTTTTGTATATGATGGCAAGAA
CAAGCCGCCTTTCAAGAGAGGCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCACCAATCATTCGGCTCTCCAA
GATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAGCAGAAGCAGAGTGTGCAAGGCTGCA
AAGAGCAGGAGTTGTTGATGCAGTTATGACCAATGACGTTGACGCTCTAATGTTTGGCTCAACATTCACCGTCAT
GGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTACCTGCTACCGCATGAACACCGCTGG
TGATCCTTCAAGTGTGAAGCTTAATCGTGCAGGCATGATCTTGTTTGCCATGTTAAGTGGCGGTGATTACTTACC
GTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAGCTGGCTTTGGCGCAGATCTTCTGGA
AATCCTGGAGTCAGACGGTGCCGAGCTCGATACGAGACTAAGTGATTGGAGAGAACGACTCCAGTATGAGTTGGA
AGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTCCGGATACTTTTCCCGACCGGACAAT
TTTGTCATATTATGCAAATCCTGTGGTTTCATCGACCGGCGATATCAAAGCCCTTCAACAATACCTGTCAAATGC
CTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACGCCTTTGAGTGGAATTACCGCTCTGG
GGCTAGGAAAGTGACCAGATTACTTTCTGAGCCGCTTCTGTCTTACCGACTACGCCTTGGAAGACAAGCATCGGC
CTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGCAGAAAATCTATAAGAGCAGGTCCAG
CTATAGCACCGATGGCTTAACGGAGTATCAACTGGATATGGTTCCCGTCGACGTTGTTGGCTTGGATATTCTTGC
TGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTGACGAGGAAGAGGAATTGGAGGATAA
CGTGGTATCGGTGCCTCAATCTCCGGTCAAAAAACGTGTCATAAAGCGCTATGACCCTTATGTCTCAGAGAAGGT
GTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGAATTGGAAACGAGAGCAAGCTGAGAA
GTCGGCACCGAAGAAGACAACGACACGAAAGACAGGACCTCGGAAAAAGGGGCCTATAGACCCGAATATGAAGCG
AGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATATCCCGCCACAAAAGCGCGCAGCTCTT
AGAGGCCGCAGTCTCTGCTAAAGCAACTGCTGTACCCAGTCTGTCGAGTTCCCGTCAGTCTCTAGATTCTCCTAA
TCCTTCAAGGAAGCCACCAGCGTCTGACATATCTATACAGCAGCAGCCATTGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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