Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS28_1|g9568.t1
Gene name
Locationscaffold_096:37114..38483
Strand-
Gene length (bp)1369
Transcript length (bp)1122
Coding sequence length (bp)1122
Protein length (aa) 374

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00544 Pectate_lyase_4 Pectate lyase 1.1E-15 123 295

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.99967

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
PL1_4 5.3E-92 112 297

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup9923
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g1069.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g9039.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g8773.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g8862.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g5910.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g9430.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g9447.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g9510.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g9568.t1 (this protein)
Aspergillus niger CBS 147321 Ani_SJS30_1|g6341.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g7355.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g8527.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g844.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g10567.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g6168.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g9051.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g9618.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g8986.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g9160.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g9866.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g10873.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g9490.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g10959.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g9584.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS28_1|g9568.t1
MKYAAALTAIAALAARAAAVGVSGTPVGFASSATGGGDATPVYPTTTDELVSYLGDDEARVIVLSKTFDFTDTEG
TTTTTGCAPWGTASGCQLAINKDDWCTNYEPDAPTTTVTYNTAGELGITVNSNKSLIGEGTSGVIKGRGLRMVSG
VSNIIIQNIAVTDINPEYVWGGDAITLDEADLVWIDHVTTARIGRQHYVLGTDADSRVSITNNYINGESDYSATC
DGHHYWNVYLDGSSDKVTFSGNYLYKTSGRAPKVQDNTYLHIYNNYWDNNSGHAFEIGSGGYVLAEGNYFSNVDT
VLETDTFEGALFSSDSASSTCESYIGRSCVANVNGGDLTGTSTTVLSNLSGDTLPSADAASTSPASSAGQGNL*
Coding >Ani_SJS28_1|g9568.t1
ATGAAGTACGCTGCTGCTCTCACGGCTATTGCCGCCCTCGCTGCCCGCGCCGCTGCTGTCGGTGTCTCCGGCACT
CCCGTGGGTTTCGCCTCCTCCGCCACTGGTGGTGGTGATGCTACCCCCGTCTACCCTACCACCACCGATGAGCTG
GTCTCTTACCTCGGTGATGACGAGGCCCGTGTCATTGTCCTGTCCAAGACTTTCGACTTCACTGACACTGAGGGC
ACTACCACGACCACCGGTTGCGCTCCCTGGGGTACTGCCTCCGGCTGCCAGCTGGCCATCAACAAGGACGACTGG
TGCACCAACTACGAGCCCGATGCTCCCACCACCACCGTCACCTACAACACTGCTGGTGAACTCGGTATCACCGTC
AACTCCAACAAGTCCCTGATCGGTGAGGGTACCAGCGGTGTCATCAAGGGCCGTGGTCTCCGCATGGTCAGCGGT
GTCTCCAACATCATCATCCAGAACATTGCTGTCACCGACATCAACCCCGAGTACGTCTGGGGTGGTGACGCCATC
ACCCTCGACGAGGCTGACTTGGTCTGGATTGACCACGTTACCACTGCCCGCATTGGTCGCCAGCACTACGTCCTC
GGTACCGACGCCGACAGCCGTGTCTCCATCACCAACAACTACATCAACGGCGAGTCTGACTACTCTGCTACTTGC
GACGGCCACCACTACTGGAACGTGTACCTTGACGGCTCTAGCGACAAGGTCACCTTCAGTGGCAACTACCTGTAC
AAGACCTCCGGCCGTGCCCCCAAGGTCCAGGACAACACCTACCTCCACATCTACAACAACTACTGGGACAACAAC
TCGGGCCACGCTTTCGAGATCGGCTCCGGTGGCTACGTCCTCGCCGAGGGTAACTACTTCTCCAACGTCGACACC
GTCCTCGAGACCGACACCTTCGAGGGTGCTCTCTTCTCCTCTGACAGCGCCTCCTCCACCTGCGAGTCCTACATT
GGCCGTTCCTGCGTTGCCAACGTCAACGGCGGTGACCTCACCGGCACCTCCACCACCGTCCTCTCCAACCTCAGC
GGCGACACCCTCCCCTCTGCTGATGCTGCCAGCACCAGCCCCGCCTCCAGCGCTGGTCAGGGTAACCTGTAA
Transcript >Ani_SJS28_1|g9568.t1
ATGAAGTACGCTGCTGCTCTCACGGCTATTGCCGCCCTCGCTGCCCGCGCCGCTGCTGTCGGTGTCTCCGGCACT
CCCGTGGGTTTCGCCTCCTCCGCCACTGGTGGTGGTGATGCTACCCCCGTCTACCCTACCACCACCGATGAGCTG
GTCTCTTACCTCGGTGATGACGAGGCCCGTGTCATTGTCCTGTCCAAGACTTTCGACTTCACTGACACTGAGGGC
ACTACCACGACCACCGGTTGCGCTCCCTGGGGTACTGCCTCCGGCTGCCAGCTGGCCATCAACAAGGACGACTGG
TGCACCAACTACGAGCCCGATGCTCCCACCACCACCGTCACCTACAACACTGCTGGTGAACTCGGTATCACCGTC
AACTCCAACAAGTCCCTGATCGGTGAGGGTACCAGCGGTGTCATCAAGGGCCGTGGTCTCCGCATGGTCAGCGGT
GTCTCCAACATCATCATCCAGAACATTGCTGTCACCGACATCAACCCCGAGTACGTCTGGGGTGGTGACGCCATC
ACCCTCGACGAGGCTGACTTGGTCTGGATTGACCACGTTACCACTGCCCGCATTGGTCGCCAGCACTACGTCCTC
GGTACCGACGCCGACAGCCGTGTCTCCATCACCAACAACTACATCAACGGCGAGTCTGACTACTCTGCTACTTGC
GACGGCCACCACTACTGGAACGTGTACCTTGACGGCTCTAGCGACAAGGTCACCTTCAGTGGCAACTACCTGTAC
AAGACCTCCGGCCGTGCCCCCAAGGTCCAGGACAACACCTACCTCCACATCTACAACAACTACTGGGACAACAAC
TCGGGCCACGCTTTCGAGATCGGCTCCGGTGGCTACGTCCTCGCCGAGGGTAACTACTTCTCCAACGTCGACACC
GTCCTCGAGACCGACACCTTCGAGGGTGCTCTCTTCTCCTCTGACAGCGCCTCCTCCACCTGCGAGTCCTACATT
GGCCGTTCCTGCGTTGCCAACGTCAACGGCGGTGACCTCACCGGCACCTCCACCACCGTCCTCTCCAACCTCAGC
GGCGACACCCTCCCCTCTGCTGATGCTGCCAGCACCAGCCCCGCCTCCAGCGCTGGTCAGGGTAACCTGTAA
Gene >Ani_SJS28_1|g9568.t1
ATGAAGTACGCTGCTGCTCTCACGGCTATTGCCGCCCTCGCTGCCCGCGCCGCTGCTGTCGGTGTCTCCGGCACT
CCCGTGGGTTTCGCCTCCTCCGCCACTGGTGGTGGTGATGCTACCCCCGTCTACCCTACCACCACCGATGAGCTG
GTCTCTTACCTCGGTGATGACGAGGCCCGTGTCATTGTCCTGTCCAAGACGTGAGTTTTGAGTCCAAAGCAGAGA
ACGAATCGATTCCCGGCTGACCAGTGTCCGAATTTGCCAGTTTCGACTTCACTGACACTGAGGGCACTACCACGA
CCACCGGTTGCGCTCCCTGGGGTACTGCCTCCGGCTGCCAGCTGGCCATCAACAAGGACGACTGGTGCACCAACT
ACGAGCCCGATGCTCCCACCACCACCGTCACCTAGTAAGTTGCCTTCTGAGGTAACCTCGAGTATCAGGGAAGAG
AAAATGCTGACAAGAGGATAGCAACACTGCTGGTGAACTCGGTATCACCGTCAACTCCAACAAGTCCCTGATCGG
TGAGGGTACCAGCGGTGTCATCAAGGGCCGTGGTCTCCGCATGGTCAGCGGTGTCTCCAACATCATCATCCAGTA
TGCATCGTCCAGGACTACATACATTACTCCCATCGCAAACTAACCATGGAATCCCCACAGGAACATTGCTGTCAC
CGACATCAACCCCGAGTACGTCTGGGGTGGTGACGCCATCACCCTCGACGAGGCTGACTTGGTCTGGATTGACCA
CGTTACCGTAAGTCGCCATCCAGCATCATGATTTTCATCCTTCCACCACTAATGAATGCTTCAGACTGCCCGCAT
TGGTCGCCAGCACTACGTCCTCGGTACCGACGCCGACAGCCGTGTCTCCATCACCAACAACTACATCAACGGCGA
GTCTGACTACTCTGCTACTTGCGACGGCCACCACTACTGGAACGTGTACCTTGACGGCTCTAGCGACAAGGTCAC
CTTCAGTGGCAACTACCTGTACAAGACCTCCGGCCGTGCCCCCAAGGTCCAGGACAACACCTACCTCCACATCTA
CAACAACTACTGGGACAACAACTCGGGCCACGCTTTCGAGATCGGCTCCGGTGGCTACGTCCTCGCCGAGGGTAA
CTACTTCTCCAACGTCGACACCGTCCTCGAGACCGACACCTTCGAGGGTGCTCTCTTCTCCTCTGACAGCGCCTC
CTCCACCTGCGAGTCCTACATTGGCCGTTCCTGCGTTGCCAACGTCAACGGCGGTGACCTCACCGGCACCTCCAC
CACCGTCCTCTCCAACCTCAGCGGCGACACCCTCCCCTCTGCTGATGCTGCCAGCACCAGCCCCGCCTCCAGCGC
TGGTCAGGGTAACCTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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