Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS28_1|g10553.t1
Gene name
Locationscaffold_134:22902..24046
Strand+
Gene length (bp)1144
Transcript length (bp)1083
Coding sequence length (bp)1083
Protein length (aa) 361

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 6.8E-10 31 71
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1.2E-08 28 77
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.7E-06 31 70

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0043167 ion binding No
GO:0005488 binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup8620
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g10249.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g8214.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g10318.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g10307.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g7979.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g6427.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g10843.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g7808.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g10553.t1 (this protein)
Aspergillus niger CBS 147321 Ani_SJS30_1|g6176.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g8588.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g9545.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g5381.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g9100.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g10523.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g2030.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g9517.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g5232.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g8881.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g8459.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g9217.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g7664.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g7696.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g8939.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS28_1|g10553.t1
MSDDVDLQQEILQRTLQEVAHDEGEHDANPCVICLEPISEAAIAVPCRHANFDFLCLLSWLEQRRNCPLCKSEIT
SVKYNLEDINGPKIYQLPASTSDTTSTSSTSHLPTPSHHRPPRRPRRPRSPRPQQQQQSTDPLRRRQHIYRHQLY
SLRVGSNRLSQYRELTPERFNREEDLVSRARKWIRRELQVFEFLNPESEDRQGGGVARPGQQRLENRRGNNAEFL
LEYIIAILRTVDIKGSAGQAEELLRDFLGRENARLFLHELQAWLRSPYISLEDWDRNVQYEDTVGSGGNAHPSRR
EREESRTATPVYRDNRGPRFPNSSGRVNKPPYHRRGGRSSRDAVAQARRVQYARDRYVPD*
Coding >Ani_SJS28_1|g10553.t1
ATGTCCGATGATGTCGACCTGCAACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCACGATGAAGGCGAG
CACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTCCGAAGCCGCCATCGCGGTGCCATGTCGCCATGCG
AACTTTGACTTTCTATGTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTGTGCAAGAGTGAAATCACA
TCAGTGAAATACAACCTCGAGGACATCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAAGCGACACCACA
AGCACCTCCTCAACCTCACACCTACCAACACCCTCACATCATCGCCCACCCCGCAGACCCCGCCGTCCGCGCAGC
CCCCGTCCCCAACAACAACAACAGTCCACCGACCCGCTCCGCCGCCGCCAACACATCTACCGACACCAACTCTAT
TCCCTCCGTGTCGGCTCCAACCGTCTTTCACAATACCGCGAACTGACTCCGGAGCGCTTTAATCGCGAAGAAGAC
CTCGTCTCCCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGAGTTTCTCAACCCAGAATCAGAGGAC
CGACAAGGCGGAGGGGTTGCGCGCCCCGGTCAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTA
CTCGAGTATATCATTGCTATTCTACGAACTGTGGATATTAAGGGTAGTGCTGGGCAGGCGGAGGAGCTGTTACGC
GATTTTCTGGGCAGGGAGAATGCCCGGTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCT
CTTGAGGACTGGGATCGGAATGTCCAGTATGAGGATACCGTGGGTAGTGGTGGTAATGCTCATCCTTCGCGGCGG
GAGCGCGAGGAGAGTAGAACTGCTACGCCAGTATATAGAGATAATAGGGGACCTCGGTTTCCTAATTCTTCTGGG
CGGGTGAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCGTCTCGGGATGCTGTGGCTCAGGCGAGACGGGTA
CAATATGCCCGGGATCGGTATGTTCCCGATTGA
Transcript >Ani_SJS28_1|g10553.t1
ATGTCCGATGATGTCGACCTGCAACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCACGATGAAGGCGAG
CACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTCCGAAGCCGCCATCGCGGTGCCATGTCGCCATGCG
AACTTTGACTTTCTATGTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTGTGCAAGAGTGAAATCACA
TCAGTGAAATACAACCTCGAGGACATCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAAGCGACACCACA
AGCACCTCCTCAACCTCACACCTACCAACACCCTCACATCATCGCCCACCCCGCAGACCCCGCCGTCCGCGCAGC
CCCCGTCCCCAACAACAACAACAGTCCACCGACCCGCTCCGCCGCCGCCAACACATCTACCGACACCAACTCTAT
TCCCTCCGTGTCGGCTCCAACCGTCTTTCACAATACCGCGAACTGACTCCGGAGCGCTTTAATCGCGAAGAAGAC
CTCGTCTCCCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGAGTTTCTCAACCCAGAATCAGAGGAC
CGACAAGGCGGAGGGGTTGCGCGCCCCGGTCAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTA
CTCGAGTATATCATTGCTATTCTACGAACTGTGGATATTAAGGGTAGTGCTGGGCAGGCGGAGGAGCTGTTACGC
GATTTTCTGGGCAGGGAGAATGCCCGGTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCT
CTTGAGGACTGGGATCGGAATGTCCAGTATGAGGATACCGTGGGTAGTGGTGGTAATGCTCATCCTTCGCGGCGG
GAGCGCGAGGAGAGTAGAACTGCTACGCCAGTATATAGAGATAATAGGGGACCTCGGTTTCCTAATTCTTCTGGG
CGGGTGAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCGTCTCGGGATGCTGTGGCTCAGGCGAGACGGGTA
CAATATGCCCGGGATCGGTATGTTCCCGATTGA
Gene >Ani_SJS28_1|g10553.t1
ATGTCCGATGATGTCGACCTGCAACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCACGATGAAGGCGAG
CACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTCCGAAGCCGCCATCGCGGTGCCATGTCGCCATGCG
AACTTTGACTTTCTATGTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTGTGTATGTACATTCCCTGT
GATAGAAATCTATCCTTATCCAGCAAATATCTGACTAGATATAGGCAAGAGTGAAATCACATCAGTGAAATACAA
CCTCGAGGACATCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAAGCGACACCACAAGCACCTCCTCAAC
CTCACACCTACCAACACCCTCACATCATCGCCCACCCCGCAGACCCCGCCGTCCGCGCAGCCCCCGTCCCCAACA
ACAACAACAGTCCACCGACCCGCTCCGCCGCCGCCAACACATCTACCGACACCAACTCTATTCCCTCCGTGTCGG
CTCCAACCGTCTTTCACAATACCGCGAACTGACTCCGGAGCGCTTTAATCGCGAAGAAGACCTCGTCTCCCGAGC
CCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGAGTTTCTCAACCCAGAATCAGAGGACCGACAAGGCGGAGG
GGTTGCGCGCCCCGGTCAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTACTCGAGTATATCAT
TGCTATTCTACGAACTGTGGATATTAAGGGTAGTGCTGGGCAGGCGGAGGAGCTGTTACGCGATTTTCTGGGCAG
GGAGAATGCCCGGTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCTCTTGAGGACTGGGA
TCGGAATGTCCAGTATGAGGATACCGTGGGTAGTGGTGGTAATGCTCATCCTTCGCGGCGGGAGCGCGAGGAGAG
TAGAACTGCTACGCCAGTATATAGAGATAATAGGGGACCTCGGTTTCCTAATTCTTCTGGGCGGGTGAATAAGCC
GCCGTATCATCGGAGAGGGGGCAGGTCGTCTCGGGATGCTGTGGCTCAGGCGAGACGGGTACAATATGCCCGGGA
TCGGTATGTTCCCGATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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