Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS14_1|g9843.t1
Gene name
Locationscaffold_111:94471..95499
Strand+
Gene length (bp)1028
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 3.9E-11 246 288
PF17123 zf-RING_11 RING-like zinc finger 2.7E-09 248 275
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 9.6E-08 248 288
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 1.2E-07 248 287

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 30 52 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup7972
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g9983.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g10558.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g5794.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g1.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g9843.t1 (this protein)
Aspergillus niger CBS 124.48 Ani_SJS7_1|g10461.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g10690.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g10615.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g7736.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g10480.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g846.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g9576.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g10210.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g113.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g8694.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g4885.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g4622.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g8173.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g10244.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g7739.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g912.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g11111.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g10692.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g10682.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS14_1|g9843.t1
MSSTTTGSSSSATSTDRNGNNNSSSPTSSPLLFFVALGFGVVFTNLWIIVGVKYCFRYNQRNRQLRSEVTGEPID
LVAMPRTHRRRREKKLMTMDDVNERFPLTKYKAWRSSRENEGLSGAGGISAPNSRSQSPKDENYMLSASLGAPSS
MVASPLKSHQRVDSNTSQASAPLENLETTLPQSEEKSQRYSEPSPTNIGVNDNANISAPEQPRNHALNHVIVEDV
GDLEDHIRTAVPADFLANPGDTCAICLDTIEDEDDIRGLTCGHAFHASCVDPWLTSRRACCPLSQNVKVDGAWHE
*
Coding >Ani_SJS14_1|g9843.t1
ATGTCCTCAACGACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCGTAATGGGAATAACAACAGCTCAAGC
CCTACTAGTTCGCCTCTACTATTTTTCGTCGCCCTCGGGTTTGGTGTTGTTTTCACCAATCTATGGATTATCGTG
GGGGTAAAATATTGCTTTCGATATAATCAACGCAATCGCCAATTACGCAGTGAAGTGACAGGCGAGCCTATAGAT
CTGGTCGCTATGCCACGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGGACGACGTTAACGAGAGG
TTTCCACTGACGAAGTATAAAGCATGGAGGTCATCCCGGGAGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCG
GCACCGAATAGCCGGTCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGCTTGGCGCTCCTTCATCC
ATGGTGGCATCGCCACTCAAAAGCCATCAGCGGGTTGATTCCAACACTTCGCAGGCCTCTGCACCACTAGAAAAC
CTGGAGACAACGCTACCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCCCTACAAACATCGGAGTA
AACGACAACGCCAACATATCAGCCCCGGAGCAGCCCCGTAACCACGCGCTCAACCATGTCATCGTAGAGGATGTT
GGAGACCTGGAAGACCATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAGGGGATACTTGTGCTATA
TGTCTCGATACGATCGAGGATGAAGATGATATACGGGGGCTTACATGTGGACATGCTTTTCATGCGTCTTGTGTT
GACCCATGGTTGACAAGTCGACGGGCTTGCTGTCCCCTATCTCAGAACGTCAAGGTCGACGGGGCATGGCACGAG
TGA
Transcript >Ani_SJS14_1|g9843.t1
ATGTCCTCAACGACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCGTAATGGGAATAACAACAGCTCAAGC
CCTACTAGTTCGCCTCTACTATTTTTCGTCGCCCTCGGGTTTGGTGTTGTTTTCACCAATCTATGGATTATCGTG
GGGGTAAAATATTGCTTTCGATATAATCAACGCAATCGCCAATTACGCAGTGAAGTGACAGGCGAGCCTATAGAT
CTGGTCGCTATGCCACGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGGACGACGTTAACGAGAGG
TTTCCACTGACGAAGTATAAAGCATGGAGGTCATCCCGGGAGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCG
GCACCGAATAGCCGGTCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGCTTGGCGCTCCTTCATCC
ATGGTGGCATCGCCACTCAAAAGCCATCAGCGGGTTGATTCCAACACTTCGCAGGCCTCTGCACCACTAGAAAAC
CTGGAGACAACGCTACCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCCCTACAAACATCGGAGTA
AACGACAACGCCAACATATCAGCCCCGGAGCAGCCCCGTAACCACGCGCTCAACCATGTCATCGTAGAGGATGTT
GGAGACCTGGAAGACCATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAGGGGATACTTGTGCTATA
TGTCTCGATACGATCGAGGATGAAGATGATATACGGGGGCTTACATGTGGACATGCTTTTCATGCGTCTTGTGTT
GACCCATGGTTGACAAGTCGACGGGCTTGCTGTCCCCTATCTCAGAACGTCAAGGTCGACGGGGCATGGCACGAG
TGA
Gene >Ani_SJS14_1|g9843.t1
ATGTCCTCAACGACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCGTAATGGGAATAACAACAGCTCAAGC
CCTACTAGTTCGCCTCTACTATTTTTCGTCGCCCTCGGGTTTGGTGTTGTTTTCACCAATCTATGGTATGTCCAA
ATTGGTATCACTAGGCCTTTGCTGCGCTTAGATGCTCATCTAACCATCGCGTTCCAGGATTATCGTGGGGGTAAA
ATATTGCTTTCGATATAATCAACGCAATCGCCAATTACGCAGTGAAGTGACAGGCGAGCCTATAGATCTGGTCGC
TATGCCACGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGGACGACGTTAACGAGAGGTTTCCACT
GACGAAGTATAAAGCATGGAGGTCATCCCGGGAGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCGGCACCGAA
TAGCCGGTCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGCTTGGCGCTCCTTCATCCATGGTGGC
ATCGCCACTCAAAAGCCATCAGCGGGTTGATTCCAACACTTCGCAGGCCTCTGCACCACTAGAAAACCTGGAGAC
AACGCTACCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCCCTACAAACATCGGAGTAAACGACAA
CGCCAACATATCAGCCCCGGAGCAGCCCCGTAACCACGCGCTCAACCATGTCATCGTAGAGGATGTTGGAGACCT
GGAAGACCATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAGGGGATACTTGTGCTATATGTCTCGA
TACGATCGAGGATGAAGATGATATACGGGGGCTTACATGTGGACATGCTTTTCATGCGTCTTGTGTTGACCCATG
GTTGACAAGTCGACGGGCTTGCTGTCCCCTATGTAAGGCAGATTACTACATCCCGAAACCTCGCGCAGAAACTTC
TGAATTGGCTCCTAGCTCAGAACGTCAAGGTCGACGGGGCATGGCACGAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail