Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS14_1|g5524.t1
Gene name
Locationscaffold_033:276572..277308
Strand+
Gene length (bp)736
Transcript length (bp)444
Coding sequence length (bp)444
Protein length (aa) 148

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00428 Ribosomal_60s 60s Acidic ribosomal protein 8.4E-23 61 146

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 10 32 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup7516
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g2426.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g7799.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g2157.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g1228.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g5524.t1 (this protein)
Aspergillus niger CBS 124.48 Ani_SJS7_1|g1389.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g3656.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g4171.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g1267.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g1586.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g3048.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g3908.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g2518.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g5600.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g1270.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g6936.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g5003.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g4152.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g4394.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g7281.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g8149.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g3338.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g3322.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g5790.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS14_1|g5524.t1
MGPQPTSRIALFLIFNFGFHFSLFPSITSLNPQRTRRVSLRPTLRLNRLILVFTTTTIQNESVLSAVGIDAEEER
LQKLLAELEGKDLQELISEGTQKLASVPSGGAGAAAAAPAAGGAAAAEAPAEEKKEEAAEESDEDMGFGLFD*
Coding >Ani_SJS14_1|g5524.t1
ATGGGACCACAACCCACCAGCCGCATCGCACTTTTCTTGATTTTCAACTTCGGATTCCATTTCTCTCTTTTTCCG
TCCATCACATCGCTCAACCCCCAGCGAACTCGACGTGTCAGTCTCCGCCCAACTTTGCGGTTAAATCGATTGATT
CTCGTGTTCACCACCACAACTATTCAAAATGAATCCGTCCTCTCCGCCGTCGGCATTGACGCTGAGGAGGAGCGC
CTCCAGAAGCTCCTTGCTGAGCTTGAGGGCAAGGACCTCCAGGAGCTCATCTCCGAGGGTACCCAGAAGCTCGCT
TCCGTTCCCTCCGGTGGTGCCGGTGCTGCTGCCGCTGCCCCCGCTGCCGGTGGCGCCGCTGCTGCTGAGGCTCCC
GCTGAGGAGAAGAAGGAGGAGGCTGCTGAGGAGTCCGATGAGGACATGGGCTTCGGTCTCTTCGACTAA
Transcript >Ani_SJS14_1|g5524.t1
ATGGGACCACAACCCACCAGCCGCATCGCACTTTTCTTGATTTTCAACTTCGGATTCCATTTCTCTCTTTTTCCG
TCCATCACATCGCTCAACCCCCAGCGAACTCGACGTGTCAGTCTCCGCCCAACTTTGCGGTTAAATCGATTGATT
CTCGTGTTCACCACCACAACTATTCAAAATGAATCCGTCCTCTCCGCCGTCGGCATTGACGCTGAGGAGGAGCGC
CTCCAGAAGCTCCTTGCTGAGCTTGAGGGCAAGGACCTCCAGGAGCTCATCTCCGAGGGTACCCAGAAGCTCGCT
TCCGTTCCCTCCGGTGGTGCCGGTGCTGCTGCCGCTGCCCCCGCTGCCGGTGGCGCCGCTGCTGCTGAGGCTCCC
GCTGAGGAGAAGAAGGAGGAGGCTGCTGAGGAGTCCGATGAGGACATGGGCTTCGGTCTCTTCGACTAA
Gene >Ani_SJS14_1|g5524.t1
ATGGGAGTTAACGCATGCGCCACGGCCGCTCGCTTAACCGGAACTAGCACGATCTGCACTAGCCACAACCCACCA
GCCGCATCGCACTTTTCTTGATTTTCAACTTCGGATTCCATTTCTCTCTTTTTCCGTCCATCACATCGCTCAACC
CCCAGCGAACTCGACGTGTCAGTCTCCGCCCAACTTTGCGGTTAAATCGATTGATTCTCGTGTTCACCACCACAA
CTGTACGTTGCCTTCTTGATTGCCTCGTTGCGAATTTCGACAGTACGACCACGACATTCCCGGCGCAGTTGTTCT
GACAGGTTGTCTTGCAGATTCAAAATGAAGTACCTCGCCGCCTACCTTCTGTTGGCCCTTGCTGGCAACAACACC
CCCTCCGCTGAGGACATCAAGTCCGTCCTCTCCGCCGTCGGCATTGACGCTGAGGAGGAGCGCCTCCAGAAGCTC
CTTGCTGAGCTTGAGGGCAAGGACCTCCAGGAGGTCAGTTAACGCCCTTAAAATCTACCAAGAAATTTTGCGATT
ACAAGATGGAATACTGACAATGGGTTTTCTACAACAGCTCATCTCCGAGGGTACCCAGAAGCTCGCTTCCGTTCC
CTCCGGTGGTGCCGGTGCTGCTGCCGCTGCCCCCGCTGCCGGTGGCGCCGCTGCTGCTGAGGCTCCCGCTGAGGA
GAAGAAGGAGGAGGCTGCTGAGGAGTCCGATGAGGACATGGGCTTCGGTCTCTTCGACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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