© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9995.t1 |
| Gene name | |
| Location | scaffold_102:44972..47617 |
| Strand | + |
| Gene length (bp) | 2645 |
| Transcript length (bp) | 1557 |
| Coding sequence length (bp) | 1557 |
| Protein length (aa) | 519 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.0E-57 | 28 | 469 |
| PF00324 | AA_permease | Amino acid permease | 1.1E-14 | 35 | 475 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 28 | 50 | 22 |
| 2 | 57 | 79 | 22 |
| 3 | 118 | 140 | 22 |
| 4 | 153 | 175 | 22 |
| 5 | 180 | 202 | 22 |
| 6 | 223 | 245 | 22 |
| 7 | 260 | 282 | 22 |
| 8 | 309 | 331 | 22 |
| 9 | 361 | 383 | 22 |
| 10 | 390 | 412 | 22 |
| 11 | 427 | 449 | 22 |
| 12 | 462 | 480 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9995.t1 MKDFRGDDDAQLAAMGHKAELNRNFSMLSMLGLAFAILNSWTALSASLSLSLPSGGCVSVIWGLITAGVCNLCMS ASLAEFLSAYPTAGGQYHWVAVISWERWMPLLSWITGWANVTGWVALTATGGLLGSELILGVISLMHPSYVSQRW HQFLIYIAYNVIAFLINAFMGSLLPKVTKGAFIWSLTGFTIICITLLACSSPNYNSGEFVFGEFINETGWPDGLA WLLGLLQGGLGLTGFDGVAHMIEEIPNPSVVGPKIMIGCVGIGTFTGTIFLIVLLFVAGNIYEDINSAATPLLQI FVNATKNNAGAICLLVFPLVCVLFAAITIMTTSSRMIYAFARDGGLPASPFFSKVHTKLEVPLNALYLTNILVII FGCIFLGSSSAFNAIVSASVVMLDIAYGIPIAVNCIRGRKMLPERSFVLPNVVGWIANLISLAYVSLTTVLFLFP PDYPATGSNMNYCVAVFGIVFLVSIFQWFVDGRKNFTGPRMDVDIISGQVAPGDGGEEVVVPSNFHEK* |
| Coding | >Ani_SJS100_1|g9995.t1 ATGAAAGACTTTCGGGGAGATGATGACGCCCAGTTGGCGGCCATGGGCCACAAGGCCGAACTGAACCGCAATTTC TCAATGCTGTCAATGTTGGGTTTAGCGTTTGCCATTCTAAATTCATGGACCGCTCTGTCCGCCAGTTTATCTCTC AGTCTGCCGTCTGGTGGCTGCGTTAGTGTCATCTGGGGGTTGATCACGGCTGGTGTCTGTAATCTTTGCATGTCG GCTTCCCTTGCCGAGTTCTTGTCGGCCTATCCTACTGCTGGTGGACAATACCATTGGGTTGCAGTTATTTCCTGG GAAAGATGGATGCCCCTTCTCTCGTGGATTACAGGATGGGCGAACGTGACTGGCTGGGTTGCCTTGACTGCAACT GGTGGTCTTCTCGGAAGTGAATTGATCTTGGGTGTCATCTCGTTGATGCATCCCTCATATGTGTCGCAACGCTGG CATCAGTTCCTCATCTACATCGCCTATAACGTTATTGCATTCCTCATCAATGCCTTCATGGGCTCACTCCTTCCC AAGGTTACTAAGGGTGCCTTTATCTGGTCCCTTACCGGGTTCACTATAATCTGCATCACCCTGCTGGCATGCTCG TCGCCCAACTACAACTCTGGCGAGTTCGTCTTCGGAGAATTCATCAACGAAACAGGATGGCCTGATGGACTTGCT TGGCTGCTCGGACTCCTTCAAGGAGGACTGGGTCTCACAGGCTTTGACGGTGTCGCGCACATGATCGAAGAAATT CCAAACCCCTCGGTGGTTGGGCCCAAGATCATGATCGGTTGCGTCGGTATTGGAACCTTTACTGGCACAATCTTC CTGATCGTTCTCCTCTTTGTGGCTGGAAACATCTACGAAGATATCAACTCCGCGGCTACGCCTTTGCTGCAAATT TTCGTGAACGCAACGAAAAACAACGCCGGTGCTATTTGCCTTCTCGTCTTCCCTCTCGTGTGTGTTCTCTTTGCC GCTATCACGATCATGACGACCAGTAGTCGTATGATCTACGCCTTTGCAAGAGATGGCGGTCTCCCCGCTTCTCCT TTCTTCAGCAAGGTGCACACCAAGCTTGAGGTTCCTCTGAATGCTTTGTACCTTACCAACATCCTCGTCATTATT TTCGGGTGTATTTTCCTTGGCTCGTCAAGTGCATTCAACGCTATTGTATCTGCATCGGTGGTCATGCTTGATATA GCGTACGGCATCCCTATCGCAGTGAACTGCATTCGCGGGCGGAAGATGCTACCGGAGAGGTCCTTTGTTTTGCCC AACGTTGTGGGCTGGATTGCAAACTTGATCTCGCTAGCCTACGTTTCTCTCACGACCGTACTTTTCCTCTTCCCT CCTGACTATCCTGCAACTGGAAGCAACATGAACTACTGTGTAGCCGTGTTTGGCATCGTTTTCCTGGTGTCGATT TTCCAATGGTTTGTGGACGGACGTAAGAACTTCACCGGGCCGCGGATGGATGTAGATATCATCAGTGGCCAGGTA GCCCCCGGTGATGGCGGAGAAGAAGTTGTGGTGCCTAGCAACTTTCATGAGAAATAA |
| Transcript | >Ani_SJS100_1|g9995.t1 ATGAAAGACTTTCGGGGAGATGATGACGCCCAGTTGGCGGCCATGGGCCACAAGGCCGAACTGAACCGCAATTTC TCAATGCTGTCAATGTTGGGTTTAGCGTTTGCCATTCTAAATTCATGGACCGCTCTGTCCGCCAGTTTATCTCTC AGTCTGCCGTCTGGTGGCTGCGTTAGTGTCATCTGGGGGTTGATCACGGCTGGTGTCTGTAATCTTTGCATGTCG GCTTCCCTTGCCGAGTTCTTGTCGGCCTATCCTACTGCTGGTGGACAATACCATTGGGTTGCAGTTATTTCCTGG GAAAGATGGATGCCCCTTCTCTCGTGGATTACAGGATGGGCGAACGTGACTGGCTGGGTTGCCTTGACTGCAACT GGTGGTCTTCTCGGAAGTGAATTGATCTTGGGTGTCATCTCGTTGATGCATCCCTCATATGTGTCGCAACGCTGG CATCAGTTCCTCATCTACATCGCCTATAACGTTATTGCATTCCTCATCAATGCCTTCATGGGCTCACTCCTTCCC AAGGTTACTAAGGGTGCCTTTATCTGGTCCCTTACCGGGTTCACTATAATCTGCATCACCCTGCTGGCATGCTCG TCGCCCAACTACAACTCTGGCGAGTTCGTCTTCGGAGAATTCATCAACGAAACAGGATGGCCTGATGGACTTGCT TGGCTGCTCGGACTCCTTCAAGGAGGACTGGGTCTCACAGGCTTTGACGGTGTCGCGCACATGATCGAAGAAATT CCAAACCCCTCGGTGGTTGGGCCCAAGATCATGATCGGTTGCGTCGGTATTGGAACCTTTACTGGCACAATCTTC CTGATCGTTCTCCTCTTTGTGGCTGGAAACATCTACGAAGATATCAACTCCGCGGCTACGCCTTTGCTGCAAATT TTCGTGAACGCAACGAAAAACAACGCCGGTGCTATTTGCCTTCTCGTCTTCCCTCTCGTGTGTGTTCTCTTTGCC GCTATCACGATCATGACGACCAGTAGTCGTATGATCTACGCCTTTGCAAGAGATGGCGGTCTCCCCGCTTCTCCT TTCTTCAGCAAGGTGCACACCAAGCTTGAGGTTCCTCTGAATGCTTTGTACCTTACCAACATCCTCGTCATTATT TTCGGGTGTATTTTCCTTGGCTCGTCAAGTGCATTCAACGCTATTGTATCTGCATCGGTGGTCATGCTTGATATA GCGTACGGCATCCCTATCGCAGTGAACTGCATTCGCGGGCGGAAGATGCTACCGGAGAGGTCCTTTGTTTTGCCC AACGTTGTGGGCTGGATTGCAAACTTGATCTCGCTAGCCTACGTTTCTCTCACGACCGTACTTTTCCTCTTCCCT CCTGACTATCCTGCAACTGGAAGCAACATGAACTACTGTGTAGCCGTGTTTGGCATCGTTTTCCTGGTGTCGATT TTCCAATGGTTTGTGGACGGACGTAAGAACTTCACCGGGCCGCGGATGGATGTAGATATCATCAGTGGCCAGGTA GCCCCCGGTGATGGCGGAGAAGAAGTTGTGGTGCCTAGCAACTTTCATGAGAAATAA |
| Gene | >Ani_SJS100_1|g9995.t1 ATGAAAGACTTTCGGGGAGATGATGACGCCCAGTTGGCGGCCATGGGCCACAAGGCCGAACTGAACCGCAATTTC TCAATGCTGTATGTTGCCTCTCCCATGCTGCTGCTGCTGCTGCTGATCTACCCTTCACGTGGACCAATACTGACG GATGGCTGTGGTTGATGCAGGTCAATGTTGGGTTTAGCGTTTGCCATTCTAAATGTATGTCGGCAAATCAACGCC TCCGCTTGATGTCGATAAGAGACCGTCTCTGGTACTAGGCCACACCAGGAAGTTGGTAGCTAATTAAGTCTGCAC GCAGTCATGGACCGCTCTGTCCGCCAGTTTATCTCTCAGTCTGCCGTCTGGTGGCTGCGTTAGTGTCATCTGGGG TAAGTCATTGGTGCTTTGGGTTCATCCCTGCTTCTACTCTGCAAGGCGGATATGTTTCTTGCTTTGATCGTGTCG GTAGTAGGTGAGATCCTTCTGCTAACTCCTGTTTTCTCTAGGGTTGATCACGGCTGGTGTCTGTAATCTTTGCAT GTCGGCTTCCCTTGCCGAGTTCTTGTCGGCCTATCCTACGTAGGTGCTTCTGGTTGTGCTTCTTGGGCTTTGGAC TAATTTGGCTAGTGCTGGTGGACAATACCATTGGGTTGCAGGTGAGTATTCTTGATTCATACTCCATGACTATTT CGGTACGGTGCTGACTATTCTTCCTCTACAGTTAGTAGGTTTTCCATAACCTGTTCGATATCACTTCCTTGCTGA CGATAGATGAAAGTTTCCTGGGAAAGATGGATGCCCCTTCTCTCGTGGATTACAGGATGGGCGAACGTGACTGGC TGGGTATGTGTACAAGACTTATTTGTGCATGCAGCTGCTAATTCTTACAGGTTGCCTTGACTGCAACTGGTGGTC TTCTCGGAAGTGAATTGATCTTGGGTGTCATCTCGTTGATGCATCCCGTAAGTCCTTTGCTGGCTTTTAGACCCG AACACTTTACTCACAGCCCAACAGTCATATGTGTCGCAACGCTGGCATCAGTTCCTCATCTACATCGCCTATAAC GTTATTGCATTCCTCATCAATGCCTTCATGGGCTCACTCCTTCCCAAGGTTACTAAGGGTGCCTGTAAGTAGAAT TGTCCGTCTGGGGATATCGATCTAAAGCTGACGTGTCTCTAGTTATCTGGTCCCTTACCGGGTTCACTATAATCT GCATCACCCTGCTGGCATGCTCGTCGCCCAACTACAACTCTGGCGAGTGAGTAATGCCGTTAGCTGACTTCCATT GGACGTGTTGCTGACTCAATAGGTTCGTCTTCGGAGAATTCATCAACGAAACAGGATGTAAGGCAGACCACACCC CTTTCTGATCGGCCAATGCTAACATTTCTTAGGGCCTGATGGACTTGCTTGGCTGCTCGGAGTATGTTTCACTAC CTAAATTCTGTGTGAAGATTGTTACTCATACCATCTAGCTCCTTCAAGGAGGACTGGGTCTCACAGGCTTTGTAA GTCTTCCGAGCTCTACTATGCATCCTGGTACTAACCGCTATAAGGACGGTGTCGCGCACATGATCGAAGGTAAAT CTGCCAAATACTACCGGCCTCGTCGCATACTAAACATGCATAGAAATTCCAAACCCCTCGGTGGTTGGGCCCAAG ATCATGATCGGTTGCGTCGGTATTGGAACCTTTACTGGCACAATCTTCCTGATCGTTCTCCTCTTTGTGGCTGGA AACATCTACGAAGATATCAACTCCGCGGCTACGCCTTTGCTGCAAATTTTCGTGAACGCAACGAAAAACAACGCC GGTGCTATTTGCCTTCTCGTGTAAGTTGTTCCTAAGATTTCGGTCCGCATTTACTGACATGCTTAAGCTTCCCTC TCGTGTGTGTTCTCTTTGCCGCTATCACGATCATGACGACCAGTAGTCGTATGATCTACGCCTTTGCAAGAGATG GCGGTCTCCCCGCTTCTCCTTTCTTCAGCAAGGTGCACACCAAGCTTGAGGTTCCTCTGAATGCTTTGTACCTTA CCAACATCCTCGTCATTATTTTCGGGTGTATTTTCCTTGGCTCGTCAAGGTACGTAAACTACAAAAAGGCAATAA TACATCTTGCGGTATGCTAACCTTAACAGTGCATTCAACGCTATTGTATCTGCATCGGTGGTCATGCTTGATATA GCGTACGGCATCCCTATCGCAGTGAACTGCATTCGCGGGCGGAAGATGCTACCGGAGAGGTCCTTTGTTTTGCCC AACGTTGTGGGCTGGATTGCAAACTTGGTACGTCTCACTTGGTGACTACGCATGCACAGAATTCTTACATGTTTC CTGAATAGATCTCGCTAGCCTACGTTTCTCTCACGACCGTACTTTTCCTCTTCCCTCCTGACTATCCTGCAACTG GAAGCAACATGAGTAAGTTGTTTTTCATCCGGCATCCACTTTACGAAGTTGCTAACGTGTCTACTCTAGACTACT GTGTAGCCGTGTTTGGCATCGTTTTCCTGGTGTCGATTTTCCAATGGTTTGTGGACGGACGTAAGAACTTCACCG GGCCGCGGATGGATGTAGATATCATCAGTGGCCAGGTAGCCCCCGGTGATGGCGGAGAAGAAGTTGTGGTGCCTA GCAACTTTCATGAGAAATAA |