Protein ID | Ani_SJS100_1|g9986.t1 |
Gene name | |
Location | scaffold_102:6180..6815 |
Strand | + |
Gene length (bp) | 635 |
Transcript length (bp) | 360 |
Coding sequence length (bp) | 360 |
Protein length (aa) | 120 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06212 | GRIM-19 | GRIM-19 protein | 1.6E-20 | 2 | 110 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 64 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 27 | 49 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9986.t1 MPQDMPPQGGYLPVQYKRNIPARGFRPIYYLIGMHLIMGYGYYKLFYGVREQYELAREKMWGRIHIMPLLQAEED RDQARRYFADKAREKELLGTDAKIYNSDRFVRPTFTYTPSKVTQ* |
Coding | >Ani_SJS100_1|g9986.t1 ATGCCTCAGGATATGCCCCCGCAGGGGGGCTACTTGCCCGTGCAGTACAAGCGCAACATCCCTGCCCGTGGCTTC CGCCCCATCTACTACCTTATCGGTATGCACCTGATCATGGGTTACGGATACTACAAGCTCTTCTACGGTGTTCGT GAACAATATGAACTCGCTCGTGAGAAGATGTGGGGCCGTATACACATCATGCCTCTTCTCCAGGCCGAGGAGGAC CGTGACCAGGCTCGTCGGTACTTCGCCGACAAGGCTCGTGAGAAGGAGCTCCTTGGTACGGACGCCAAGATCTAC AACTCGGACCGCTTTGTCCGCCCTACCTTCACGTATACCCCCAGCAAGGTCACTCAATAA |
Transcript | >Ani_SJS100_1|g9986.t1 ATGCCTCAGGATATGCCCCCGCAGGGGGGCTACTTGCCCGTGCAGTACAAGCGCAACATCCCTGCCCGTGGCTTC CGCCCCATCTACTACCTTATCGGTATGCACCTGATCATGGGTTACGGATACTACAAGCTCTTCTACGGTGTTCGT GAACAATATGAACTCGCTCGTGAGAAGATGTGGGGCCGTATACACATCATGCCTCTTCTCCAGGCCGAGGAGGAC CGTGACCAGGCTCGTCGGTACTTCGCCGACAAGGCTCGTGAGAAGGAGCTCCTTGGTACGGACGCCAAGATCTAC AACTCGGACCGCTTTGTCCGCCCTACCTTCACGTATACCCCCAGCAAGGTCACTCAATAA |
Gene | >Ani_SJS100_1|g9986.t1 ATGCCTCAGGATATGCCCCCGCAGGGGGGCTACTTGCCCGTGCAGTACAAGGTGCGTTAACCACACGAAACAACG TTCCATCGGATCCGATTCACGAGCAACCACACCCTACCTTACTTTCTATGATTTCGATCCCTACGTCCGGAGGCA CGAGCCAATTGCTAATGAATCTGCCCTCATGTATAGCGCAACATCCCTGCCCGTGGCTTCCGCCCCATCTACTAC CTTATCGGTATGCACCTGATCATGGGTTACGGATACTACAAGCTCTTCTACGGTGTTCGTGAACAATAGTACGTC TCTACAAACCAGAAATCCCGGCAAACAAGGAATGGATATTGACGAAAGGGGAATGAACAGTGAACTCGCTCGTGA GAAGATGTGGGGCCGTATACACATCATGCCTCTTCTCCAGGCCGAGGAGGACCGTGACCAGGCTCGTCGGTACTT CGCCGACAAGGCTCGTGAGAAGGAGCTCCTTGGTACGGACGCCAAGATCTACAACTCGGACCGGTATGTTCTCTC CACCCGTATTTGGATGTCAATTGGGCTGGGAAAGGCTAATCAAGATCCCTACCGAAAACAGCTTTGTCCGCCCTA CCTTCACGTATACCCCCAGCAAGGTCACTCAATAA |