Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9986.t1
Gene name
Locationscaffold_102:6180..6815
Strand+
Gene length (bp)635
Transcript length (bp)360
Coding sequence length (bp)360
Protein length (aa) 120

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06212 GRIM-19 GRIM-19 protein 1.6E-20 2 110

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 64 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9986.t1
MPQDMPPQGGYLPVQYKRNIPARGFRPIYYLIGMHLIMGYGYYKLFYGVREQYELAREKMWGRIHIMPLLQAEED
RDQARRYFADKAREKELLGTDAKIYNSDRFVRPTFTYTPSKVTQ*
Coding >Ani_SJS100_1|g9986.t1
ATGCCTCAGGATATGCCCCCGCAGGGGGGCTACTTGCCCGTGCAGTACAAGCGCAACATCCCTGCCCGTGGCTTC
CGCCCCATCTACTACCTTATCGGTATGCACCTGATCATGGGTTACGGATACTACAAGCTCTTCTACGGTGTTCGT
GAACAATATGAACTCGCTCGTGAGAAGATGTGGGGCCGTATACACATCATGCCTCTTCTCCAGGCCGAGGAGGAC
CGTGACCAGGCTCGTCGGTACTTCGCCGACAAGGCTCGTGAGAAGGAGCTCCTTGGTACGGACGCCAAGATCTAC
AACTCGGACCGCTTTGTCCGCCCTACCTTCACGTATACCCCCAGCAAGGTCACTCAATAA
Transcript >Ani_SJS100_1|g9986.t1
ATGCCTCAGGATATGCCCCCGCAGGGGGGCTACTTGCCCGTGCAGTACAAGCGCAACATCCCTGCCCGTGGCTTC
CGCCCCATCTACTACCTTATCGGTATGCACCTGATCATGGGTTACGGATACTACAAGCTCTTCTACGGTGTTCGT
GAACAATATGAACTCGCTCGTGAGAAGATGTGGGGCCGTATACACATCATGCCTCTTCTCCAGGCCGAGGAGGAC
CGTGACCAGGCTCGTCGGTACTTCGCCGACAAGGCTCGTGAGAAGGAGCTCCTTGGTACGGACGCCAAGATCTAC
AACTCGGACCGCTTTGTCCGCCCTACCTTCACGTATACCCCCAGCAAGGTCACTCAATAA
Gene >Ani_SJS100_1|g9986.t1
ATGCCTCAGGATATGCCCCCGCAGGGGGGCTACTTGCCCGTGCAGTACAAGGTGCGTTAACCACACGAAACAACG
TTCCATCGGATCCGATTCACGAGCAACCACACCCTACCTTACTTTCTATGATTTCGATCCCTACGTCCGGAGGCA
CGAGCCAATTGCTAATGAATCTGCCCTCATGTATAGCGCAACATCCCTGCCCGTGGCTTCCGCCCCATCTACTAC
CTTATCGGTATGCACCTGATCATGGGTTACGGATACTACAAGCTCTTCTACGGTGTTCGTGAACAATAGTACGTC
TCTACAAACCAGAAATCCCGGCAAACAAGGAATGGATATTGACGAAAGGGGAATGAACAGTGAACTCGCTCGTGA
GAAGATGTGGGGCCGTATACACATCATGCCTCTTCTCCAGGCCGAGGAGGACCGTGACCAGGCTCGTCGGTACTT
CGCCGACAAGGCTCGTGAGAAGGAGCTCCTTGGTACGGACGCCAAGATCTACAACTCGGACCGGTATGTTCTCTC
CACCCGTATTTGGATGTCAATTGGGCTGGGAAAGGCTAATCAAGATCCCTACCGAAAACAGCTTTGTCCGCCCTA
CCTTCACGTATACCCCCAGCAAGGTCACTCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail