Protein ID | Ani_SJS100_1|g9984.t1 |
Gene name | |
Location | scaffold_102:1424..4056 |
Strand | - |
Gene length (bp) | 2632 |
Transcript length (bp) | 2400 |
Coding sequence length (bp) | 2400 |
Protein length (aa) | 800 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08553 | VID27 | VID27 C-terminal WD40-like domain | 1.4E-193 | 424 | 775 |
PF17748 | VID27_N | VID27 N-terminal region | 3.0E-75 | 1 | 173 |
PF17747 | VID27_PH | VID27 PH-like domain | 5.3E-46 | 241 | 348 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9984.t1 MFVLRNVSKYLFGDSSKESIIEIPQGQLYLVRPLSPKGYSELIFKDAAASIRRTGQEFQYQLVIQRAYEEGEEEL GEEDDEQGGSDSLDKDEKVFLLDQALHFRSEVREGGQKILAWRDLSGDIGDLFEFVCDPSVPSDKVSTFELAALQ CQYERAYRRSSQNVSREDLQEFSFQEEKPIPSASPISSSARSPARSPTSGESTAAMVKDVEYSRSKGQIKPAASE EATVAPPSAAQPEAREVLAKEKAELHLFDFVSGTFVLQAANVTATVSEIGDWKYWLQISGEDKEWLGQAVVADIN PVFNFEYLSFIFNAYSEDGSAFSWLLRFKDQETEERFQEGLMQALWEQLNEMKWTKVKEQEREYVLDAFQDLTME DAEEREAEAEEEEEEEDEEEDHYDGQRSEHYDSDEEQDDVVTRDDDGNVNSQLAVGYKHDRSFVVRGSKIGVFKH TPDNNLEFSTNISKVETPRGKLFSPKKVMLHAEDTNMILQNGDDPNSLYRMDLEYGKIVDEWKVHDDIPVTTFAP ESKFSQMTSAQPFIGASKNALYRIDPRVDGNKLVDTDLKQYASKNEFSSVATTEKGYIAVASNKGDIRMFDRLGI NAKTHIPALGEPIIGLDVSADGRWVLATCRTYLLLIDSLQKEGKNEGKLGFERSFAKDSKPQPRRLGLQPAHVAQ FQHETKKPISFTQARFNTGVDSQETSIVTATGPFIITWSLKKVVAGRKDPYTIKRYGEDVMADNFRFGSDKNVIV ALPNEVNMVAKRSLMKPTRESIAGPPVTPRRRTQWGSRLGRDEIVNSPY* |
Coding | >Ani_SJS100_1|g9984.t1 ATGTTTGTGCTCCGCAACGTGAGCAAGTACCTCTTCGGAGACTCTTCCAAGGAATCTATTATCGAGATCCCTCAG GGACAACTTTATCTCGTCCGCCCTCTGTCGCCCAAGGGCTACTCGGAACTCATCTTCAAGGACGCCGCCGCCTCC ATCAGACGCACTGGCCAGGAATTCCAGTATCAGCTCGTCATCCAGCGCGCCTACGAGGAAGGCGAAGAGGAGCTT GGAGAAGAGGACGACGAGCAAGGCGGCAGTGACAGCCTCGATAAGGACGAAAAGGTCTTCCTGCTCGATCAGGCT CTGCACTTTCGCTCCGAGGTGCGCGAAGGAGGACAAAAGATCTTGGCCTGGAGAGACCTGAGTGGCGACATTGGT GACCTTTTTGAATTTGTCTGCGACCCCTCCGTACCTTCGGATAAGGTTTCCACCTTCGAGCTAGCCGCTCTTCAG TGCCAGTACGAGCGCGCATACCGCCGCAGCTCCCAGAACGTGAGCCGCGAAGATCTGCAGGAGTTCTCATTCCAG GAGGAGAAGCCTATCCCGTCTGCAAGCCCTATCTCTTCTTCAGCACGGTCTCCTGCTCGGTCGCCGACATCTGGA GAGTCCACCGCCGCCATGGTGAAGGACGTCGAATACTCGCGGTCCAAGGGACAAATTAAACCTGCAGCCTCAGAG GAAGCCACCGTTGCCCCCCCTTCTGCAGCGCAGCCTGAGGCTAGGGAGGTCCTTGCCAAGGAGAAGGCCGAGCTG CACCTGTTCGACTTTGTGAGCGGAACGTTCGTTCTGCAGGCGGCCAACGTAACTGCGACTGTTTCTGAGATTGGT GACTGGAAGTACTGGCTTCAGATTAGCGGAGAAGACAAGGAGTGGCTGGGACAGGCTGTCGTTGCTGACATCAAC CCCGTTTTCAACTTCGAGTATCTGTCGTTCATCTTCAATGCCTACAGTGAAGATGGCTCGGCGTTCTCTTGGCTC TTGCGCTTCAAGGACCAGGAGACTGAGGAGAGGTTCCAGGAGGGTCTCATGCAGGCTCTGTGGGAACAGCTGAAC GAGATGAAGTGGACAAAGGTCAAGGAGCAAGAACGAGAGTATGTGCTGGACGCCTTCCAGGATCTCACAATGGAA GATGCAGAGGAACGCGAAGCCGAGGCCGAAGAGGAAGAAGAAGAGGAAGACGAGGAGGAAGACCACTACGACGGT CAACGCAGCGAACACTACGACTCCGACGAGGAGCAAGATGATGTTGTTACGCGGGATGATGATGGAAACGTCAAC TCCCAGCTTGCCGTCGGTTACAAGCATGACCGCTCCTTTGTTGTCCGTGGCTCCAAGATTGGCGTCTTCAAGCAC ACTCCCGACAACAACTTGGAGTTCTCTACCAACATCTCCAAGGTTGAGACCCCCAGGGGCAAGCTCTTCAGCCCC AAGAAGGTCATGTTGCACGCCGAGGACACCAACATGATCCTTCAGAACGGTGACGACCCGAACTCGCTTTACCGG ATGGACTTGGAGTATGGTAAGATTGTGGATGAGTGGAAGGTCCACGATGACATTCCAGTTACTACATTTGCTCCT GAGAGTAAATTCTCCCAAATGACCTCTGCACAGCCCTTCATTGGTGCTTCTAAGAACGCCCTCTACCGCATCGAC CCCCGTGTCGACGGAAACAAGTTGGTGGACACAGACCTGAAGCAGTATGCCAGCAAGAACGAGTTTTCTTCGGTG GCTACCACTGAGAAGGGTTACATCGCCGTCGCCTCCAACAAGGGTGATATCCGGATGTTTGACCGTCTTGGAATC AACGCTAAGACACATATTCCTGCTCTGGGAGAGCCGATCATCGGACTGGATGTGTCTGCGGACGGCCGCTGGGTG CTTGCAACCTGCCGGACATACCTCCTCCTTATCGACTCGCTACAGAAGGAGGGCAAGAACGAAGGCAAGCTAGGC TTCGAGCGCTCATTCGCCAAGGACTCCAAGCCTCAGCCTCGCCGTCTGGGTCTGCAGCCTGCCCATGTGGCCCAG TTCCAGCACGAGACGAAGAAGCCTATCAGCTTCACGCAAGCACGATTCAACACGGGTGTCGACAGTCAGGAGACT TCGATTGTCACGGCCACTGGTCCCTTCATCATCACCTGGAGCTTGAAGAAGGTCGTTGCCGGACGCAAGGACCCC TACACCATCAAGCGGTACGGCGAGGACGTGATGGCAGACAACTTCCGCTTTGGTTCGGACAAGAACGTCATTGTG GCCTTGCCCAACGAAGTCAACATGGTTGCCAAGCGGAGTTTGATGAAGCCCACTCGCGAGAGTATCGCCGGACCT CCTGTCACACCCCGTCGCAGGACCCAATGGGGCAGCCGGTTAGGAAGGGACGAGATTGTCAACTCGCCTTACTGA |
Transcript | >Ani_SJS100_1|g9984.t1 ATGTTTGTGCTCCGCAACGTGAGCAAGTACCTCTTCGGAGACTCTTCCAAGGAATCTATTATCGAGATCCCTCAG GGACAACTTTATCTCGTCCGCCCTCTGTCGCCCAAGGGCTACTCGGAACTCATCTTCAAGGACGCCGCCGCCTCC ATCAGACGCACTGGCCAGGAATTCCAGTATCAGCTCGTCATCCAGCGCGCCTACGAGGAAGGCGAAGAGGAGCTT GGAGAAGAGGACGACGAGCAAGGCGGCAGTGACAGCCTCGATAAGGACGAAAAGGTCTTCCTGCTCGATCAGGCT CTGCACTTTCGCTCCGAGGTGCGCGAAGGAGGACAAAAGATCTTGGCCTGGAGAGACCTGAGTGGCGACATTGGT GACCTTTTTGAATTTGTCTGCGACCCCTCCGTACCTTCGGATAAGGTTTCCACCTTCGAGCTAGCCGCTCTTCAG TGCCAGTACGAGCGCGCATACCGCCGCAGCTCCCAGAACGTGAGCCGCGAAGATCTGCAGGAGTTCTCATTCCAG GAGGAGAAGCCTATCCCGTCTGCAAGCCCTATCTCTTCTTCAGCACGGTCTCCTGCTCGGTCGCCGACATCTGGA GAGTCCACCGCCGCCATGGTGAAGGACGTCGAATACTCGCGGTCCAAGGGACAAATTAAACCTGCAGCCTCAGAG GAAGCCACCGTTGCCCCCCCTTCTGCAGCGCAGCCTGAGGCTAGGGAGGTCCTTGCCAAGGAGAAGGCCGAGCTG CACCTGTTCGACTTTGTGAGCGGAACGTTCGTTCTGCAGGCGGCCAACGTAACTGCGACTGTTTCTGAGATTGGT GACTGGAAGTACTGGCTTCAGATTAGCGGAGAAGACAAGGAGTGGCTGGGACAGGCTGTCGTTGCTGACATCAAC CCCGTTTTCAACTTCGAGTATCTGTCGTTCATCTTCAATGCCTACAGTGAAGATGGCTCGGCGTTCTCTTGGCTC TTGCGCTTCAAGGACCAGGAGACTGAGGAGAGGTTCCAGGAGGGTCTCATGCAGGCTCTGTGGGAACAGCTGAAC GAGATGAAGTGGACAAAGGTCAAGGAGCAAGAACGAGAGTATGTGCTGGACGCCTTCCAGGATCTCACAATGGAA GATGCAGAGGAACGCGAAGCCGAGGCCGAAGAGGAAGAAGAAGAGGAAGACGAGGAGGAAGACCACTACGACGGT CAACGCAGCGAACACTACGACTCCGACGAGGAGCAAGATGATGTTGTTACGCGGGATGATGATGGAAACGTCAAC TCCCAGCTTGCCGTCGGTTACAAGCATGACCGCTCCTTTGTTGTCCGTGGCTCCAAGATTGGCGTCTTCAAGCAC ACTCCCGACAACAACTTGGAGTTCTCTACCAACATCTCCAAGGTTGAGACCCCCAGGGGCAAGCTCTTCAGCCCC AAGAAGGTCATGTTGCACGCCGAGGACACCAACATGATCCTTCAGAACGGTGACGACCCGAACTCGCTTTACCGG ATGGACTTGGAGTATGGTAAGATTGTGGATGAGTGGAAGGTCCACGATGACATTCCAGTTACTACATTTGCTCCT GAGAGTAAATTCTCCCAAATGACCTCTGCACAGCCCTTCATTGGTGCTTCTAAGAACGCCCTCTACCGCATCGAC CCCCGTGTCGACGGAAACAAGTTGGTGGACACAGACCTGAAGCAGTATGCCAGCAAGAACGAGTTTTCTTCGGTG GCTACCACTGAGAAGGGTTACATCGCCGTCGCCTCCAACAAGGGTGATATCCGGATGTTTGACCGTCTTGGAATC AACGCTAAGACACATATTCCTGCTCTGGGAGAGCCGATCATCGGACTGGATGTGTCTGCGGACGGCCGCTGGGTG CTTGCAACCTGCCGGACATACCTCCTCCTTATCGACTCGCTACAGAAGGAGGGCAAGAACGAAGGCAAGCTAGGC TTCGAGCGCTCATTCGCCAAGGACTCCAAGCCTCAGCCTCGCCGTCTGGGTCTGCAGCCTGCCCATGTGGCCCAG TTCCAGCACGAGACGAAGAAGCCTATCAGCTTCACGCAAGCACGATTCAACACGGGTGTCGACAGTCAGGAGACT TCGATTGTCACGGCCACTGGTCCCTTCATCATCACCTGGAGCTTGAAGAAGGTCGTTGCCGGACGCAAGGACCCC TACACCATCAAGCGGTACGGCGAGGACGTGATGGCAGACAACTTCCGCTTTGGTTCGGACAAGAACGTCATTGTG GCCTTGCCCAACGAAGTCAACATGGTTGCCAAGCGGAGTTTGATGAAGCCCACTCGCGAGAGTATCGCCGGACCT CCTGTCACACCCCGTCGCAGGACCCAATGGGGCAGCCGGTTAGGAAGGGACGAGATTGTCAACTCGCCTTACTGA |
Gene | >Ani_SJS100_1|g9984.t1 ATGTTTGTGCTCCGCAACGGTAAGTCCCTTCCCTTCCCGGATGTCTTCTCCTCAAGGACAGCTTTGCGTTCACTT TGGCTTTGCTACCCCGCCATCTGCCCCTCCTCCCCTCATCCTCCTTCCCTGCTTCCTCCCCTCCCGCCTTCATCA CTTACCAGTTCCCTCTCATACTGACGTATCCTCTCGGGACCTATCCAGTGAGCAAGTACCTCTTCGGAGACTCTT CCAAGGAATCTATTATCGAGATCCCTCAGGGACAACTTTATCTCGTCCGCCCTCTGTCGCCCAAGGGCTACTCGG AACTCATCTTCAAGGACGCCGCCGCCTCCATCAGACGCACTGGCCAGGAATTCCAGTATCAGCTCGTCATCCAGC GCGCCTACGAGGAAGGCGAAGAGGAGCTTGGAGAAGAGGACGACGAGCAAGGCGGCAGTGACAGCCTCGATAAGG ACGAAAAGGTCTTCCTGCTCGATCAGGCTCTGCACTTTCGCTCCGAGGTGCGCGAAGGAGGACAAAAGATCTTGG CCTGGAGAGACCTGAGTGGCGACATTGGTGACCTTTTTGAATTTGTCTGCGACCCCTCCGTACCTTCGGATAAGG TTTCCACCTTCGAGCTAGCCGCTCTTCAGTGCCAGTACGAGCGCGCATACCGCCGCAGCTCCCAGAACGTGAGCC GCGAAGATCTGCAGGAGTTCTCATTCCAGGAGGAGAAGCCTATCCCGTCTGCAAGCCCTATCTCTTCTTCAGCAC GGTCTCCTGCTCGGTCGCCGACATCTGGAGAGTCCACCGCCGCCATGGTGAAGGACGTCGAATACTCGCGGTCCA AGGGACAAATTAAACCTGCAGCCTCAGAGGAAGCCACCGTTGCCCCCCCTTCTGCAGCGCAGCCTGAGGCTAGGG AGGTCCTTGCCAAGGAGAAGGCCGAGCTGCACCTGTTCGACTTTGTGAGCGGAACGTTCGTTCTGCAGGCGGCCA ACGTAACTGCGACTGTTTCTGAGATTGGTGACTGGAAGTACTGGCTTCAGATTAGCGGAGAAGACAAGGAGTGGC TGGGACAGGCTGTCGTTGCTGACATCAACCCCGTTTTCAACTTCGAGTATCTGTCGTTCATCTTCAATGCCTACA GTGAAGATGGCTCGGCGTTCTCTTGGCTCTTGCGCTTCAAGGACCAGGAGACTGAGGAGAGGTTCCAGGAGGGTC TCATGCAGGCTCTGTGGGAACAGCTGAACGAGATGAAGTGGACAAAGGTCAAGGAGCAAGAACGAGAGTATGTGC TGGACGCCTTCCAGGATCTCACAATGGAAGATGCAGAGGAACGCGAAGCCGAGGCCGAAGAGGAAGAAGAAGAGG AAGACGAGGAGGAAGACCACTACGACGGTCAACGCAGCGAACACTACGACTCCGACGAGGAGCAAGATGATGTTG TTACGCGGGATGATGATGGAAACGTCAACTCCCAGCTTGCCGTCGGTTACAAGCATGACCGCTCCTTTGTTGTCC GTGGCTCCAAGATTGGCGTCTTCAAGCACACTCCCGACAACAACTTGGAGTTCTCTACCAACATCTCCAAGGTTG AGACCCCCAGGGGCAAGCTCTTCAGCCCCAAGAAGGTCATGTTGCACGCCGAGGACACCAACATGATCCTTCAGA ACGGTGACGACCCGAACTCGCTTTACCGGATGGACTTGGAGTATGGTAAGATTGTGGATGAGTGGAAGGTCCACG ATGACATTCCAGTTACTACATTTGCTCCTGAGAGTGTGAGTATCCTATTTACTTGTCTATTGCGTGAGATATTTG CTAACTTAGCTAGAAATTCTCCCAAATGACCTCTGCACAGCCCTTCATTGGTGCTTCTAAGAACGCCCTCTACCG CATCGACCCCCGTGTCGACGGAAACAAGTTGGTGGACACAGACCTGAAGCAGTATGCCAGCAAGAACGAGTTTTC TTCGGTGGCTACCACTGAGAAGGGTTACATCGCCGTCGCCTCCAACAAGGGTGATATCCGGATGTTTGACCGTCT TGGAATCAACGCTAAGACACATATTCCTGCTCTGGGAGAGCCGATCATCGGACTGGATGTGTCTGCGGACGGCCG CTGGGTGCTTGCAACCTGCCGGACATACCTCCTCCTTATCGACTCGCTACAGAAGGAGGGCAAGAACGAAGGCAA GCTAGGCTTCGAGCGCTCATTCGCCAAGGACTCCAAGCCTCAGCCTCGCCGTCTGGGTCTGCAGCCTGCCCATGT GGCCCAGTTCCAGCACGAGACGAAGAAGCCTATCAGCTTCACGCAAGCACGATTCAACACGGGTGTCGACAGTCA GGAGACTTCGATTGTCACGGCCACTGGTCCCTTCATCATCACCTGGAGCTTGAAGAAGGTCGTTGCCGGACGCAA GGACCCCTACACCATCAAGCGGTACGGCGAGGACGTGATGGCAGACAACTTCCGCTTTGGTTCGGACAAGAACGT CATTGTGGCCTTGCCCAACGAAGTCAACATGGTTGCCAAGCGGAGTTTGATGAAGCCCACTCGCGAGAGTATCGC CGGACCTCCTGTCACACCCCGTCGCAGGACCCAATGGGGCAGCCGGTTAGGAAGGGACGAGATTGTCAACTCGCC TTACTGA |