Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9981.t1
Gene name
Locationscaffold_101:95209..95653
Strand-
Gene length (bp)444
Transcript length (bp)444
Coding sequence length (bp)444
Protein length (aa) 148

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11779 SPT_ssu-like Small subunit of serine palmitoyltransferase-like 1.2E-16 61 109

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

Domain # Start End Length
1 88 110 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9981.t1
MATEMRSFYTPSTSTHISSHAPAAVDELINKYSSTMTNCPGSSHLSMKQPRRNILQRSVDRIRLEYYRYEVTFGL
YVMTPGEKLVANTFVMVVLSLLFWALLVYFPALLYQKLSRLVWLLTGHSSEEMGAALGILDSHVNSISTPSS*
Coding >Ani_SJS100_1|g9981.t1
ATGGCGACCGAAATGCGGTCGTTCTACACCCCCTCGACCTCCACACACATCTCCTCGCATGCGCCGGCTGCAGTG
GATGAGCTGATCAACAAATACTCTTCTACCATGACAAACTGTCCTGGTTCCAGCCATTTGTCCATGAAGCAACCC
CGTCGCAACATCCTGCAGCGATCTGTCGACCGTATTCGGCTGGAATATTACCGCTACGAGGTTACATTCGGACTC
TATGTGATGACACCAGGGGAGAAGCTGGTGGCCAACACCTTTGTGATGGTCGTCCTGTCCTTGCTGTTCTGGGCA
CTGCTTGTTTATTTCCCCGCGCTGCTGTACCAGAAGCTCAGCCGTCTCGTATGGCTGTTGACTGGGCATAGTAGC
GAGGAAATGGGTGCAGCCTTGGGCATACTCGACTCGCACGTTAACTCGATATCCACCCCCTCCAGCTGA
Transcript >Ani_SJS100_1|g9981.t1
ATGGCGACCGAAATGCGGTCGTTCTACACCCCCTCGACCTCCACACACATCTCCTCGCATGCGCCGGCTGCAGTG
GATGAGCTGATCAACAAATACTCTTCTACCATGACAAACTGTCCTGGTTCCAGCCATTTGTCCATGAAGCAACCC
CGTCGCAACATCCTGCAGCGATCTGTCGACCGTATTCGGCTGGAATATTACCGCTACGAGGTTACATTCGGACTC
TATGTGATGACACCAGGGGAGAAGCTGGTGGCCAACACCTTTGTGATGGTCGTCCTGTCCTTGCTGTTCTGGGCA
CTGCTTGTTTATTTCCCCGCGCTGCTGTACCAGAAGCTCAGCCGTCTCGTATGGCTGTTGACTGGGCATAGTAGC
GAGGAAATGGGTGCAGCCTTGGGCATACTCGACTCGCACGTTAACTCGATATCCACCCCCTCCAGCTGA
Gene >Ani_SJS100_1|g9981.t1
ATGGCGACCGAAATGCGGTCGTTCTACACCCCCTCGACCTCCACACACATCTCCTCGCATGCGCCGGCTGCAGTG
GATGAGCTGATCAACAAATACTCTTCTACCATGACAAACTGTCCTGGTTCCAGCCATTTGTCCATGAAGCAACCC
CGTCGCAACATCCTGCAGCGATCTGTCGACCGTATTCGGCTGGAATATTACCGCTACGAGGTTACATTCGGACTC
TATGTGATGACACCAGGGGAGAAGCTGGTGGCCAACACCTTTGTGATGGTCGTCCTGTCCTTGCTGTTCTGGGCA
CTGCTTGTTTATTTCCCCGCGCTGCTGTACCAGAAGCTCAGCCGTCTCGTATGGCTGTTGACTGGGCATAGTAGC
GAGGAAATGGGTGCAGCCTTGGGCATACTCGACTCGCACGTTAACTCGATATCCACCCCCTCCAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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