© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g9902.t1 |
| Gene name | |
| Location | scaffold_099:56672..57721 |
| Strand | - |
| Gene length (bp) | 1049 |
| Transcript length (bp) | 771 |
| Coding sequence length (bp) | 771 |
| Protein length (aa) | 257 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03987 | Autophagy_act_C | Autophagocytosis associated protein, active-site domain | 1.2E-26 | 21 | 241 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0019787 | ubiquitin-like protein transferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9902.t1 MASSLSSQRTLSGFPLLTAEEFETACHAFLGRVHVVDDSKVGWSSIRLDQRATGPILSIARDIGHVGTRDRDEPL PDPEMNEELQWKASEEDPVRRAGTLSIPLSILKVSSNIKQEALIRAPETSVHLQVIYNILLSPTYHVPVLYFQLR QDNHPGPLGIDAVYQYLVPEQYRKELQSIGIMGGISFGYRPDSGTPAFFVHPCQTTDAMRHIAGQLCLTPEIYLI IWLGLVGNRLGLQLPKELFTVEGMETFQGTA* |
| Coding | >Ani_SJS100_1|g9902.t1 ATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTCCTTTACTCACTGCCGAGGAATTTGAAACCGCC TGTCACGCCTTTCTAGGTCGGGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCTCGATCAG CGGGCAACCGGGCCCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGATCGCGACGAGCCCCTC CCGGACCCAGAGATGAACGAAGAACTACAGTGGAAGGCCTCGGAAGAAGATCCCGTCCGTCGAGCTGGAACCCTT TCCATTCCGCTCTCAATTTTAAAAGTATCGTCTAACATCAAACAGGAAGCTCTCATTCGTGCGCCCGAGACCAGT GTCCATTTACAGGTGATTTATAATATTCTGCTTTCTCCCACGTACCACGTCCCTGTCTTGTATTTCCAGTTACGG CAGGACAACCATCCGGGGCCGCTGGGAATTGACGCAGTCTACCAATACCTGGTACCGGAACAGTACAGAAAGGAA CTCCAGAGCATTGGCATCATGGGTGGTATTAGTTTTGGCTATCGTCCAGACTCCGGAACTCCAGCATTTTTCGTT CATCCATGCCAAACAACGGATGCGATGAGGCACATTGCAGGACAGCTCTGTCTCACTCCCGAGATTTATCTCATA ATCTGGCTCGGGTTGGTGGGTAACCGTCTCGGTCTTCAGCTGCCAAAGGAACTCTTCACAGTCGAAGGCATGGAG ACATTCCAAGGCACTGCGTGA |
| Transcript | >Ani_SJS100_1|g9902.t1 ATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTCCTTTACTCACTGCCGAGGAATTTGAAACCGCC TGTCACGCCTTTCTAGGTCGGGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCTCGATCAG CGGGCAACCGGGCCCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGATCGCGACGAGCCCCTC CCGGACCCAGAGATGAACGAAGAACTACAGTGGAAGGCCTCGGAAGAAGATCCCGTCCGTCGAGCTGGAACCCTT TCCATTCCGCTCTCAATTTTAAAAGTATCGTCTAACATCAAACAGGAAGCTCTCATTCGTGCGCCCGAGACCAGT GTCCATTTACAGGTGATTTATAATATTCTGCTTTCTCCCACGTACCACGTCCCTGTCTTGTATTTCCAGTTACGG CAGGACAACCATCCGGGGCCGCTGGGAATTGACGCAGTCTACCAATACCTGGTACCGGAACAGTACAGAAAGGAA CTCCAGAGCATTGGCATCATGGGTGGTATTAGTTTTGGCTATCGTCCAGACTCCGGAACTCCAGCATTTTTCGTT CATCCATGCCAAACAACGGATGCGATGAGGCACATTGCAGGACAGCTCTGTCTCACTCCCGAGATTTATCTCATA ATCTGGCTCGGGTTGGTGGGTAACCGTCTCGGTCTTCAGCTGCCAAAGGAACTCTTCACAGTCGAAGGCATGGAG ACATTCCAAGGCACTGCGTGA |
| Gene | >Ani_SJS100_1|g9902.t1 ATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTCCTTTACTCACTGCCGAGGAATTTGAAACCGCC TGTCACGCCTTTCTAGGTCGGGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCTCGATCAG CGGGTAAGTTAGTTGCCTCGCTTCAGGTCGTTCGGCTTTGTTCCACCCTCCTTCTCTTGTTGGCTGTCGCTTGAG GGAAAGAATCATGGGAATCTGCGCGACAGTGATTGGAACATTGGCTAGGAAGATGGCCTGAACTATACACATCAA TCCTTTTCCCCTTTCTTTTTTTCCCCCCCTCCTCTTCACCCTCCCCCTGCTACACCCCACTCCTAGCTAAATCCA TTAGGCAACCGGGCCCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGATCGCGACGAGCCCCT CCCGGACCCAGAGATGAACGAAGAACTACAGTGGAAGGCCTCGGAAGAAGATCCCGTCCGTCGAGCTGGAACCCT TTCCATTCCGCTCTCAATTTTAAAAGTATCGTCTAACATCAAACAGGAAGCTCTCATTCGTGCGCCCGAGACCAG TGTCCATTTACAGGTGATTTATAATATTCTGCTTTCTCCCACGTACCACGTCCCTGTCTTGTATTTCCAGTTACG GCAGGACAACCATCCGGGGCCGCTGGGAATTGACGCAGTCTACCAATACCTGGTACCGGAACAGTACAGAAAGGA ACTCCAGAGCATTGGCATCATGGGTGGTATTAGTTTTGGCGTATGTGCAAGTTCTCGAATCCCTAGCCCAAGCTG GAGCTTATGCTTCGTAGTATCGTCCAGACTCCGGAACTCCAGCATTTTTCGTTCATCCATGCCAAACAACGGATG CGATGAGGCACATTGCAGGACAGCTCTGTCTCACTCCCGAGATTTATCTCATAATCTGGCTCGGGTTGGTGGGTA ACCGTCTCGGTCTTCAGCTGCCAAAGGAACTCTTCACAGTCGAAGGCATGGAGACATTCCAAGGCACTGCGTGA |