Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g9882.t1
Gene name
Location	scaffold_099:3598..4395
Strand	+
Gene length (bp)	797
Transcript length (bp)	636
Coding sequence length (bp)	636
Protein length (aa)	212

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10311	Ilm1	Increased loss of mitochondrial DNA protein 1	5.4E-63	4	205

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 28	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	121	143	22
2	176	195	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g9882.t1 MALLSSKTLIQAHALFLFVLAVYLTRSPEVVTESDLVFMLGEFLNLEATPSISRPQSPFALCGVLLVVDALVDLI LVTKVPQINEILAMAQAARVQSPIPVAGAVRTNPFMARLASLYTEIWTLLSASRFCIFFAVSFFIYQSQPSAWGM DTATVMGNYGTAGAATSGLDQLKNRVVFTYGFMEMMFWLWILLTLREERQEAANRFVEQDR*
Coding	>Ani_SJS100_1\|g9882.t1 ATGGCTCTCCTTTCCTCCAAGACCTTGATCCAGGCACATGCCCTGTTCCTGTTTGTGCTGGCCGTGTACCTGACC AGGTCGCCAGAGGTCGTGACCGAGTCTGACCTCGTCTTCATGCTTGGGGAATTCTTGAATTTGGAGGCGACCCCT AGTATCTCCCGACCTCAATCCCCTTTCGCCCTATGTGGTGTCCTCCTCGTCGTCGATGCCCTGGTCGATCTTATC CTTGTGACCAAGGTCCCGCAGATTAACGAGATCCTGGCCATGGCCCAAGCCGCCAGAGTGCAATCCCCTATACCG GTGGCAGGGGCTGTGCGCACCAACCCTTTCATGGCGCGCTTGGCCTCGCTCTACACGGAGATCTGGACCCTCCTT TCCGCCTCTCGTTTCTGTATCTTCTTTGCCGTTTCCTTCTTCATCTACCAGAGTCAACCATCGGCGTGGGGGATG GATACCGCTACAGTTATGGGAAACTACGGCACAGCCGGTGCCGCTACGTCGGGTCTGGATCAACTGAAAAATAGG GTGGTGTTCACATATGGCTTTATGGAAATGATGTTTTGGTTATGGATTCTCCTAACCCTTAGGGAAGAGCGACAG GAAGCAGCTAACCGGTTCGTGGAACAGGACCGGTAG
Transcript	>Ani_SJS100_1\|g9882.t1 ATGGCTCTCCTTTCCTCCAAGACCTTGATCCAGGCACATGCCCTGTTCCTGTTTGTGCTGGCCGTGTACCTGACC AGGTCGCCAGAGGTCGTGACCGAGTCTGACCTCGTCTTCATGCTTGGGGAATTCTTGAATTTGGAGGCGACCCCT AGTATCTCCCGACCTCAATCCCCTTTCGCCCTATGTGGTGTCCTCCTCGTCGTCGATGCCCTGGTCGATCTTATC CTTGTGACCAAGGTCCCGCAGATTAACGAGATCCTGGCCATGGCCCAAGCCGCCAGAGTGCAATCCCCTATACCG GTGGCAGGGGCTGTGCGCACCAACCCTTTCATGGCGCGCTTGGCCTCGCTCTACACGGAGATCTGGACCCTCCTT TCCGCCTCTCGTTTCTGTATCTTCTTTGCCGTTTCCTTCTTCATCTACCAGAGTCAACCATCGGCGTGGGGGATG GATACCGCTACAGTTATGGGAAACTACGGCACAGCCGGTGCCGCTACGTCGGGTCTGGATCAACTGAAAAATAGG GTGGTGTTCACATATGGCTTTATGGAAATGATGTTTTGGTTATGGATTCTCCTAACCCTTAGGGAAGAGCGACAG GAAGCAGCTAACCGGTTCGTGGAACAGGACCGGTAG
Gene	>Ani_SJS100_1\|g9882.t1 ATGGCTCTCCTTTCCTCCAAGACCTTGATCCAGGCACATGCCCTGTTCCTGTTTGTGCTGGCCGTGTACCTGACC AGGTCGCCAGAGGTCGTGACCGAGTCTGACCTCGTCTTCATGCTTGGGGAATTCTTGAATTTGGTATGTTTATGG TCACTTGTTCATTCGCCCCTTGTGCTACCCCGTCGCTTTAGCTGAACACTTCATTCAATCAATCTAGGAGGCGAC CCCTAGTATCTCCCGACCTCAATCCCCTTTCGCCCTATGTGGTGTCCTCCTCGTCGTCGATGCCCTGGTCGATCT TATCCTTGTGACCAAGGTCCCGCAGATTAACGAGATCCTGGCCATGGCCCAAGCCGCCAGAGTGCAATCCCCTAT ACCGGTGGCAGGGGCTGTGCGCACCAACCCTTTCATGGCGCGCTTGGCCTCGCTCTACACGGAGATCTGGACCCT CCTTTCCGCCTCTCGTTTCTGTATCTTCTTTGCCGTTTCCTTCTTCATCTACCAGAGTCAACCATCGGCGTGGGG GATGGATACCGCTACAGTTATGGGAAACTACGGCACAGCCGGTGCCGCTACGTCGGGTCTGGATCAACTGAAAAA TAGGGTGGTGTTCACATATGGCTTTATGGAAATGATGTTTTGGTTATGGGTAAATTTCCCCTCCCCACGCTTGCT CCCCCAGAGAAAATCTGGTGGGTACGCCAGGGTCATGGTTTGCTGACAACTGATAGATTCTCCTAACCCTTAGGG AAGAGCGACAGGAAGCAGCTAACCGGTTCGTGGAACAGGACCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail