© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9868.t1 |
| Gene name | |
| Location | scaffold_098:84950..86321 |
| Strand | - |
| Gene length (bp) | 1371 |
| Transcript length (bp) | 1371 |
| Coding sequence length (bp) | 1371 |
| Protein length (aa) | 457 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13424 | TPR_12 | Tetratricopeptide repeat | 6.6E-12 | 94 | 165 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 6.7E-15 | 176 | 249 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 1.8E-16 | 222 | 292 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 5.0E-12 | 304 | 377 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 1.0E-10 | 364 | 419 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 4.8E-10 | 388 | 440 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 6.5E-07 | 92 | 131 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 5.2E-04 | 134 | 172 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 1.8E-08 | 176 | 215 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 2.3E-09 | 218 | 258 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 1.3E-09 | 260 | 300 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 3.6E-05 | 302 | 342 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 2.3E-04 | 344 | 385 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 2.2E-15 | 386 | 427 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 1.6E-04 | 390 | 418 |
| PF17874 | TPR_MalT | MalT-like TPR region | 1.3E-08 | 256 | 377 |
| PF07721 | TPR_4 | Tetratricopeptide repeat | 8.7E-01 | 223 | 239 |
| PF07721 | TPR_4 | Tetratricopeptide repeat | 7.0E-03 | 390 | 412 |
| PF01535 | PPR | PPR repeat | 1.3E+00 | 98 | 116 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0042802 | identical protein binding | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 54 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9868.t1 MDVSLSPSYLKAFRALLKRYRKQGHADAATELETVVEQVSSENRGDSGVALKRFEALVLAFLERGQWNSAVDVGT IVVDARRAQLGPNDPITMAAVHNLVSGYCGQGRWTEAIDLGRQVTEARRKVLGEDHSHTMASMSNLATAYRREGH WRQSEALELRLLQIKTRRFGQDNQSTLTSMGNLANTYTHMGRYDDAERLEKRVVEQCTRAMGEHHGSTLMWKSNL AATYREQGRLEEALKLESEVMEIRIERLGTHHPLTLTSMANLATMYRDQGRLEDAEHLETQVVEISKIELGEQHP QTLMSMINLASTYRGQDRMEEAASLGARAVAVMKSRLGEQNPLTLTAMADLALTYQGQGKTGSAEALTAQVLRLM QKNLGPLHPHTLTTMANLGAIYQSQGRWDEAEALAEQAVRGREKVLGKTHPDTQASMEDLLRVYRVLAADRTTGI HMRHTQ* |
| Coding | >Ani_SJS100_1|g9868.t1 ATGGATGTTTCGCTCTCTCCTTCGTATCTGAAGGCGTTCAGGGCTCTGTTGAAAAGGTATCGGAAGCAAGGACAT GCTGATGCAGCTACTGAGCTAGAGACGGTGGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGACTCGGGCGTCGCG CTGAAGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTGAGCGAGGTCAGTGGAACTCGGCCGTAGATGTCGGAACG ATTGTGGTCGATGCCCGACGGGCGCAGCTAGGTCCCAACGATCCCATCACCATGGCTGCGGTCCACAACTTGGTA TCGGGGTACTGTGGCCAGGGCCGTTGGACGGAAGCGATTGATCTGGGTCGCCAGGTCACAGAGGCCCGTCGCAAG GTCCTGGGAGAGGATCACTCCCACACGATGGCCTCCATGTCCAACTTGGCTACCGCATATCGGAGGGAGGGGCAT TGGCGACAATCCGAGGCGCTCGAACTTCGTCTGCTGCAGATCAAGACGCGAAGATTCGGCCAGGACAACCAATCT ACCCTCACGTCCATGGGCAACCTGGCCAACACGTACACTCACATGGGGCGATATGATGATGCAGAACGACTGGAG AAGAGGGTAGTGGAACAATGTACACGTGCGATGGGTGAGCACCATGGGTCCACCTTGATGTGGAAGTCGAACCTG GCAGCCACGTATCGAGAGCAGGGTCGATTGGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGATGGAGATCCGGATC GAGCGACTCGGAACCCACCACCCGTTGACGCTGACATCCATGGCGAACCTTGCAACGATGTACCGGGACCAGGGG CGATTGGAGGACGCAGAACATCTGGAGACGCAGGTCGTAGAGATAAGCAAGATCGAGCTAGGGGAGCAGCATCCG CAGACCCTGATGTCGATGATCAACTTGGCGTCCACCTACCGGGGCCAGGATCGCATGGAAGAGGCCGCCAGTCTC GGGGCACGAGCGGTGGCTGTGATGAAGTCACGCCTGGGTGAGCAGAACCCGTTAACCCTGACTGCCATGGCGGAT CTCGCCTTGACCTACCAGGGTCAAGGCAAGACAGGGAGCGCCGAAGCATTGACCGCACAGGTGCTGCGTCTGATG CAGAAGAACCTCGGACCGCTCCATCCCCACACACTGACGACCATGGCCAACCTGGGGGCCATCTACCAGTCACAG GGCCGCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAGCGGTGCGTGGCCGGGAGAAGGTCTTGGGGAAAACGCAC CCGGACACGCAGGCGTCGATGGAAGATCTGCTGCGCGTGTATCGAGTGTTGGCGGCGGATCGCACGACGGGAATA CACATGCGTCATACCCAATAG |
| Transcript | >Ani_SJS100_1|g9868.t1 ATGGATGTTTCGCTCTCTCCTTCGTATCTGAAGGCGTTCAGGGCTCTGTTGAAAAGGTATCGGAAGCAAGGACAT GCTGATGCAGCTACTGAGCTAGAGACGGTGGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGACTCGGGCGTCGCG CTGAAGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTGAGCGAGGTCAGTGGAACTCGGCCGTAGATGTCGGAACG ATTGTGGTCGATGCCCGACGGGCGCAGCTAGGTCCCAACGATCCCATCACCATGGCTGCGGTCCACAACTTGGTA TCGGGGTACTGTGGCCAGGGCCGTTGGACGGAAGCGATTGATCTGGGTCGCCAGGTCACAGAGGCCCGTCGCAAG GTCCTGGGAGAGGATCACTCCCACACGATGGCCTCCATGTCCAACTTGGCTACCGCATATCGGAGGGAGGGGCAT TGGCGACAATCCGAGGCGCTCGAACTTCGTCTGCTGCAGATCAAGACGCGAAGATTCGGCCAGGACAACCAATCT ACCCTCACGTCCATGGGCAACCTGGCCAACACGTACACTCACATGGGGCGATATGATGATGCAGAACGACTGGAG AAGAGGGTAGTGGAACAATGTACACGTGCGATGGGTGAGCACCATGGGTCCACCTTGATGTGGAAGTCGAACCTG GCAGCCACGTATCGAGAGCAGGGTCGATTGGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGATGGAGATCCGGATC GAGCGACTCGGAACCCACCACCCGTTGACGCTGACATCCATGGCGAACCTTGCAACGATGTACCGGGACCAGGGG CGATTGGAGGACGCAGAACATCTGGAGACGCAGGTCGTAGAGATAAGCAAGATCGAGCTAGGGGAGCAGCATCCG CAGACCCTGATGTCGATGATCAACTTGGCGTCCACCTACCGGGGCCAGGATCGCATGGAAGAGGCCGCCAGTCTC GGGGCACGAGCGGTGGCTGTGATGAAGTCACGCCTGGGTGAGCAGAACCCGTTAACCCTGACTGCCATGGCGGAT CTCGCCTTGACCTACCAGGGTCAAGGCAAGACAGGGAGCGCCGAAGCATTGACCGCACAGGTGCTGCGTCTGATG CAGAAGAACCTCGGACCGCTCCATCCCCACACACTGACGACCATGGCCAACCTGGGGGCCATCTACCAGTCACAG GGCCGCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAGCGGTGCGTGGCCGGGAGAAGGTCTTGGGGAAAACGCAC CCGGACACGCAGGCGTCGATGGAAGATCTGCTGCGCGTGTATCGAGTGTTGGCGGCGGATCGCACGACGGGAATA CACATGCGTCATACCCAATAG |
| Gene | >Ani_SJS100_1|g9868.t1 ATGGATGTTTCGCTCTCTCCTTCGTATCTGAAGGCGTTCAGGGCTCTGTTGAAAAGGTATCGGAAGCAAGGACAT GCTGATGCAGCTACTGAGCTAGAGACGGTGGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGACTCGGGCGTCGCG CTGAAGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTGAGCGAGGTCAGTGGAACTCGGCCGTAGATGTCGGAACG ATTGTGGTCGATGCCCGACGGGCGCAGCTAGGTCCCAACGATCCCATCACCATGGCTGCGGTCCACAACTTGGTA TCGGGGTACTGTGGCCAGGGCCGTTGGACGGAAGCGATTGATCTGGGTCGCCAGGTCACAGAGGCCCGTCGCAAG GTCCTGGGAGAGGATCACTCCCACACGATGGCCTCCATGTCCAACTTGGCTACCGCATATCGGAGGGAGGGGCAT TGGCGACAATCCGAGGCGCTCGAACTTCGTCTGCTGCAGATCAAGACGCGAAGATTCGGCCAGGACAACCAATCT ACCCTCACGTCCATGGGCAACCTGGCCAACACGTACACTCACATGGGGCGATATGATGATGCAGAACGACTGGAG AAGAGGGTAGTGGAACAATGTACACGTGCGATGGGTGAGCACCATGGGTCCACCTTGATGTGGAAGTCGAACCTG GCAGCCACGTATCGAGAGCAGGGTCGATTGGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGATGGAGATCCGGATC GAGCGACTCGGAACCCACCACCCGTTGACGCTGACATCCATGGCGAACCTTGCAACGATGTACCGGGACCAGGGG CGATTGGAGGACGCAGAACATCTGGAGACGCAGGTCGTAGAGATAAGCAAGATCGAGCTAGGGGAGCAGCATCCG CAGACCCTGATGTCGATGATCAACTTGGCGTCCACCTACCGGGGCCAGGATCGCATGGAAGAGGCCGCCAGTCTC GGGGCACGAGCGGTGGCTGTGATGAAGTCACGCCTGGGTGAGCAGAACCCGTTAACCCTGACTGCCATGGCGGAT CTCGCCTTGACCTACCAGGGTCAAGGCAAGACAGGGAGCGCCGAAGCATTGACCGCACAGGTGCTGCGTCTGATG CAGAAGAACCTCGGACCGCTCCATCCCCACACACTGACGACCATGGCCAACCTGGGGGCCATCTACCAGTCACAG GGCCGCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAGCGGTGCGTGGCCGGGAGAAGGTCTTGGGGAAAACGCAC CCGGACACGCAGGCGTCGATGGAAGATCTGCTGCGCGTGTATCGAGTGTTGGCGGCGGATCGCACGACGGGAATA CACATGCGTCATACCCAATAG |