Protein ID | Ani_SJS100_1|g9768.t1 |
Gene name | |
Location | scaffold_095:55181..57546 |
Strand | + |
Gene length (bp) | 2365 |
Transcript length (bp) | 2160 |
Coding sequence length (bp) | 2160 |
Protein length (aa) | 720 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16508 | NIBRIN_BRCT_II | Second BRCT domain on Nijmegen syndrome breakage protein | 1.1E-39 | 260 | 380 |
PF00498 | FHA | FHA domain | 3.4E-07 | 42 | 119 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9768.t1 MSTRSEQLHLAARHTTAPMWILDSEGDFLGGKRVWLRPGKKYLFGRIKQDGVRHAIDNKSISRKHMMIEVSPVKS GDGSHIYTRSKIAVRDLGSKYGTRVDGNTVKDESKDLTGEEHEIKLGRYEHALRIKWQPVVLTFSFSSKELKAKD PLAQVRSRVEDLDIKTIIPYVVDHTTHVVQKKRNTAKGLQALVNGKYIVQDSYLDALVYAATPSDLENLESLSPL EADFDTAWPDAMAHLPPPGKETVQRPKEAFAPRLDRIKVFEDYTFVFMEPAQFGNLQDVITNGHGKALLYQVEES VTTAAEIVQYMRNAAGDKGMGSQRDGPGGVVLVRYVASGRYENWWAELGNEVALTTDQRVIQQSEFLDAILGNDA SGLCRSLPEAQDMDTEPTQAPAATPDVQEVQDSQPPTESQPSTKRKPRVRGFVSKMETFDDGFDINSIPVHAPES VDDSPPLMDIEPSPAQPSQPQSSLQEEEEEEEEEEEEEEEEEDMVSSLLPGAQAMKRRRAQTTQRAKEEPSSETK DEAMPRVKRQKLDVLEAARQHREAEDAQRQRRAEEASLQGSLEDVNVEQLKGLAIVEEMEVKPRNEGEEDRRWED RWNGRKNFKKFRRKGEPGQPRYRIQTVIVPLEEVTRKDFGIGDHYWVSNRTEQSPADRPDERAVSQDAAASRSQS SGRVESETPAPRETRSQPRVQKRMREEQDSDSDDGLRFRFRRRR* |
Coding | >Ani_SJS100_1|g9768.t1 ATGTCAACTCGATCCGAGCAGCTGCATCTCGCTGCCAGGCACACAACCGCTCCCATGTGGATTCTAGACTCGGAG GGTGATTTTCTGGGAGGCAAGCGCGTGTGGCTGCGACCGGGGAAGAAGTATCTCTTCGGTCGGATCAAGCAAGAT GGAGTCCGACACGCCATTGATAACAAGTCGATATCCCGAAAGCATATGATGATCGAAGTTTCACCTGTCAAATCG GGAGATGGATCGCATATTTACACCAGATCGAAAATTGCCGTTCGCGACTTGGGATCGAAATATGGCACCAGAGTG GATGGTAACACTGTTAAGGATGAAAGTAAAGATCTGACTGGTGAGGAGCATGAAATCAAGTTGGGGAGATATGAA CATGCGCTGCGGATCAAGTGGCAACCAGTCGTCCTTACGTTCTCCTTTTCCTCGAAAGAACTTAAAGCGAAAGAT CCCCTGGCACAAGTGCGCTCTCGTGTCGAGGATCTGGATATCAAAACGATTATTCCCTATGTTGTCGACCACACC ACGCACGTTGTACAAAAGAAACGGAATACGGCCAAAGGTCTTCAAGCCTTGGTGAACGGAAAGTACATTGTGCAG GATTCATATCTTGACGCCTTGGTTTACGCGGCTACCCCGAGCGATCTAGAGAACCTTGAGTCGCTGTCCCCGCTG GAGGCCGATTTCGACACTGCATGGCCGGATGCAATGGCACATCTTCCCCCACCTGGCAAGGAAACCGTACAAAGA CCAAAGGAAGCGTTTGCTCCGAGGCTCGATCGAATCAAAGTTTTTGAGGACTACACATTCGTATTCATGGAACCT GCGCAGTTTGGAAACTTGCAGGATGTTATTACAAACGGCCACGGGAAGGCCCTGCTTTACCAAGTGGAAGAAAGT GTCACAACGGCGGCAGAGATCGTACAATATATGAGAAATGCGGCTGGCGACAAAGGTATGGGGAGCCAACGGGAT GGCCCTGGCGGCGTGGTTCTTGTTCGATATGTTGCGAGTGGACGCTATGAGAACTGGTGGGCCGAGCTGGGTAAC GAGGTTGCTTTGACGACCGACCAGCGGGTAATTCAACAGAGCGAATTCCTGGACGCCATTCTGGGAAATGACGCT TCTGGCCTGTGCCGATCCTTGCCTGAGGCCCAGGACATGGATACAGAACCCACACAAGCACCAGCTGCTACCCCT GATGTTCAAGAAGTCCAAGACTCACAGCCTCCGACGGAAAGCCAGCCGTCAACGAAGAGGAAGCCACGAGTTCGA GGATTTGTGAGTAAAATGGAAACGTTCGATGATGGCTTCGATATCAACTCTATTCCTGTTCATGCGCCGGAGAGC GTTGATGACTCGCCGCCATTGATGGATATCGAGCCATCGCCGGCACAACCATCGCAACCGCAAAGCAGCCTGCAA GAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATATGGTCTCAAGCTTACTGCCT GGTGCTCAAGCGATGAAACGTCGCCGTGCTCAGACGACGCAGAGGGCTAAAGAAGAGCCCAGTTCCGAGACGAAA GATGAGGCCATGCCGCGGGTTAAACGCCAGAAACTGGACGTACTGGAGGCTGCGCGACAGCATCGGGAGGCCGAA GATGCGCAACGCCAGCGTCGGGCGGAAGAAGCGTCGCTGCAAGGTTCTCTTGAGGACGTCAATGTGGAGCAGCTC AAAGGGCTTGCGATCGTAGAGGAGATGGAAGTGAAACCGAGGAATGAGGGCGAAGAGGATCGTCGGTGGGAAGAT CGGTGGAATGGACGCAAGAACTTCAAGAAGTTCCGCCGAAAGGGCGAACCTGGGCAGCCTCGCTACCGCATCCAG ACGGTGATAGTGCCACTAGAGGAGGTGACGCGAAAGGATTTTGGGATTGGGGACCATTACTGGGTCAGTAATCGC ACGGAGCAGAGTCCAGCAGACCGACCAGACGAACGAGCAGTCAGCCAGGACGCAGCGGCATCCCGTTCGCAGTCC TCGGGCCGGGTTGAGTCGGAGACGCCAGCGCCCAGGGAGACCCGAAGTCAGCCCCGGGTGCAGAAACGGATGCGA GAAGAGCAAGATTCGGATAGTGATGATGGGCTTCGGTTCCGATTCCGTCGCAGGCGATGA |
Transcript | >Ani_SJS100_1|g9768.t1 ATGTCAACTCGATCCGAGCAGCTGCATCTCGCTGCCAGGCACACAACCGCTCCCATGTGGATTCTAGACTCGGAG GGTGATTTTCTGGGAGGCAAGCGCGTGTGGCTGCGACCGGGGAAGAAGTATCTCTTCGGTCGGATCAAGCAAGAT GGAGTCCGACACGCCATTGATAACAAGTCGATATCCCGAAAGCATATGATGATCGAAGTTTCACCTGTCAAATCG GGAGATGGATCGCATATTTACACCAGATCGAAAATTGCCGTTCGCGACTTGGGATCGAAATATGGCACCAGAGTG GATGGTAACACTGTTAAGGATGAAAGTAAAGATCTGACTGGTGAGGAGCATGAAATCAAGTTGGGGAGATATGAA CATGCGCTGCGGATCAAGTGGCAACCAGTCGTCCTTACGTTCTCCTTTTCCTCGAAAGAACTTAAAGCGAAAGAT CCCCTGGCACAAGTGCGCTCTCGTGTCGAGGATCTGGATATCAAAACGATTATTCCCTATGTTGTCGACCACACC ACGCACGTTGTACAAAAGAAACGGAATACGGCCAAAGGTCTTCAAGCCTTGGTGAACGGAAAGTACATTGTGCAG GATTCATATCTTGACGCCTTGGTTTACGCGGCTACCCCGAGCGATCTAGAGAACCTTGAGTCGCTGTCCCCGCTG GAGGCCGATTTCGACACTGCATGGCCGGATGCAATGGCACATCTTCCCCCACCTGGCAAGGAAACCGTACAAAGA CCAAAGGAAGCGTTTGCTCCGAGGCTCGATCGAATCAAAGTTTTTGAGGACTACACATTCGTATTCATGGAACCT GCGCAGTTTGGAAACTTGCAGGATGTTATTACAAACGGCCACGGGAAGGCCCTGCTTTACCAAGTGGAAGAAAGT GTCACAACGGCGGCAGAGATCGTACAATATATGAGAAATGCGGCTGGCGACAAAGGTATGGGGAGCCAACGGGAT GGCCCTGGCGGCGTGGTTCTTGTTCGATATGTTGCGAGTGGACGCTATGAGAACTGGTGGGCCGAGCTGGGTAAC GAGGTTGCTTTGACGACCGACCAGCGGGTAATTCAACAGAGCGAATTCCTGGACGCCATTCTGGGAAATGACGCT TCTGGCCTGTGCCGATCCTTGCCTGAGGCCCAGGACATGGATACAGAACCCACACAAGCACCAGCTGCTACCCCT GATGTTCAAGAAGTCCAAGACTCACAGCCTCCGACGGAAAGCCAGCCGTCAACGAAGAGGAAGCCACGAGTTCGA GGATTTGTGAGTAAAATGGAAACGTTCGATGATGGCTTCGATATCAACTCTATTCCTGTTCATGCGCCGGAGAGC GTTGATGACTCGCCGCCATTGATGGATATCGAGCCATCGCCGGCACAACCATCGCAACCGCAAAGCAGCCTGCAA GAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATATGGTCTCAAGCTTACTGCCT GGTGCTCAAGCGATGAAACGTCGCCGTGCTCAGACGACGCAGAGGGCTAAAGAAGAGCCCAGTTCCGAGACGAAA GATGAGGCCATGCCGCGGGTTAAACGCCAGAAACTGGACGTACTGGAGGCTGCGCGACAGCATCGGGAGGCCGAA GATGCGCAACGCCAGCGTCGGGCGGAAGAAGCGTCGCTGCAAGGTTCTCTTGAGGACGTCAATGTGGAGCAGCTC AAAGGGCTTGCGATCGTAGAGGAGATGGAAGTGAAACCGAGGAATGAGGGCGAAGAGGATCGTCGGTGGGAAGAT CGGTGGAATGGACGCAAGAACTTCAAGAAGTTCCGCCGAAAGGGCGAACCTGGGCAGCCTCGCTACCGCATCCAG ACGGTGATAGTGCCACTAGAGGAGGTGACGCGAAAGGATTTTGGGATTGGGGACCATTACTGGGTCAGTAATCGC ACGGAGCAGAGTCCAGCAGACCGACCAGACGAACGAGCAGTCAGCCAGGACGCAGCGGCATCCCGTTCGCAGTCC TCGGGCCGGGTTGAGTCGGAGACGCCAGCGCCCAGGGAGACCCGAAGTCAGCCCCGGGTGCAGAAACGGATGCGA GAAGAGCAAGATTCGGATAGTGATGATGGGCTTCGGTTCCGATTCCGTCGCAGGCGATGA |
Gene | >Ani_SJS100_1|g9768.t1 ATGTCAACTCGATCCGAGCAGCTGCATCTCGCTGCCAGGCACACAACCGCTCCCATGTGGATTCTAGACTCGGAG GGTGATTTTCTGGGAGGTAATACATCTTCACGCTACCACCTTAGTGGACTTGGCTGATTGTGAAAGGCAAGCGCG TGTGGCTGCGACCGGGGAAGAAGTATCTCTTCGGTCGGATCAAGCAAGATGGAGGTAAGATGCTGTGATAACGGC CAAAGTCTACCATACTTACCTTTAGTCTCAATGCAGTCCGACACGCCATTGATAACAAGTCGATATCCCGAAAGC ATATGATGATCGAAGTTTCACCTGTCAAATCGGGAGATGGAGTACGATAATCCAATTCCTCTGCTTTCCCCGCTA ACCGTTCAGTCGCATATTTACACCAGATCGAAAATTGCCGTTCGCGACTTGGGATCGAAATATGGCACCAGAGTG GATGGTAACACTGTTAAGGATGAAAGTAAAGATCTGACTGGTGAGGAGCATGAAATCAAGTTGGGGAGATATGAA CATGCGCTGCGGTAATTGCCATCGCAAGGAACAATGTCAGCAGTGACTAACCGTGGTGGTTACTAGGATCAAGTG GCAACCAGTCGTCCTTACGTTCTCCTTTTCCTCGAAAGAACTTAAAGCGAAAGATCCCCTGGCACAAGTGCGCTC TCGTGTCGAGGATCTGGATATCAAAACGATTATTCCCTATGTTGTCGACCACACCACGCACGTTGTACAAAAGAA ACGGAATACGGCCAAAGGTCTTCAAGCCTTGGTGAACGGAAAGTACATTGTGCAGGATTCATATCTTGACGCCTT GGTTTACGCGGCTACCCCGAGCGATCTAGAGAACCTTGAGTCGCTGTCCCCGCTGGAGGCCGATTTCGACACTGC ATGGCCGGATGCAATGGCACATCTTCCCCCACCTGGCAAGGAAACCGTACAAAGACCAAAGGAAGCGTTTGCTCC GAGGCTCGATCGAATCAAAGTTTTTGAGGACTACACATTCGTATTCATGGAACCTGCGCAGTTTGGAAACTTGCA GGATGTTATTACAAACGGCCACGGGAAGGCCCTGCTTTACCAAGTGGAAGAAAGTGTCACAACGGCGGCAGAGAT CGTACAATATATGAGAAATGCGGCTGGCGACAAAGGTATGGGGAGCCAACGGGATGGCCCTGGCGGCGTGGTTCT TGTTCGATATGTTGCGAGTGGACGCTATGAGAACTGGTGGGCCGAGCTGGGTAACGAGGTTGCTTTGACGACCGA CCAGCGGGTAATTCAACAGAGCGAATTCCTGGACGCCATTCTGGGAAATGACGCTTCTGGCCTGTGCCGATCCTT GCCTGAGGCCCAGGACATGGATACAGAACCCACACAAGCACCAGCTGCTACCCCTGATGTTCAAGAAGTCCAAGA CTCACAGCCTCCGACGGAAAGCCAGCCGTCAACGAAGAGGAAGCCACGAGTTCGAGGATTTGTGAGTAAAATGGA AACGTTCGATGATGGCTTCGATATCAACTCTATTCCTGTTCATGCGCCGGAGAGCGTTGATGACTCGCCGCCATT GATGGATATCGAGCCATCGCCGGCACAACCATCGCAACCGCAAAGCAGCCTGCAAGAGGAGGAGGAAGAAGAAGA AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATATGGTCTCAAGCTTACTGCCTGGTGCTCAAGCGATGAAACG TCGCCGTGCTCAGACGACGCAGAGGGCTAAAGAAGAGCCCAGTTCCGAGACGAAAGATGAGGCCATGCCGCGGGT TAAACGCCAGAAACTGGACGTACTGGAGGCTGCGCGACAGCATCGGGAGGCCGAAGATGCGCAACGCCAGCGTCG GGCGGAAGAAGCGTCGCTGCAAGGTTCTCTTGAGGACGTCAATGTGGAGCAGCTCAAAGGGCTTGCGATCGTAGA GGAGATGGAAGTGAAACCGAGGAATGAGGGCGAAGAGGATCGTCGGTGGGAAGATCGGTGGAATGGACGCAAGAA CTTCAAGAAGTTCCGCCGAAAGGGCGAACCTGGGCAGCCTCGCTACCGCATCCAGACGGTGATAGTGCCACTAGA GGAGGTGACGCGAAAGGATTTTGGGATTGGGGACCATTACTGGGTCAGTAATCGCACGGAGCAGAGTCCAGCAGA CCGACCAGACGAACGAGCAGTCAGCCAGGACGCAGCGGCATCCCGTTCGCAGTCCTCGGGCCGGGTTGAGTCGGA GACGCCAGCGCCCAGGGAGACCCGAAGTCAGCCCCGGGTGCAGAAACGGATGCGAGAAGAGCAAGATTCGGATAG TGATGATGGGCTTCGGTTCCGATTCCGTCGCAGGCGATGA |