© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9767.t1 |
| Gene name | |
| Location | scaffold_095:53206..55068 |
| Strand | - |
| Gene length (bp) | 1862 |
| Transcript length (bp) | 1815 |
| Coding sequence length (bp) | 1815 |
| Protein length (aa) | 605 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00817 | IMS | impB/mucB/samB family | 2.5E-43 | 119 | 262 |
| PF11799 | IMS_C | impB/mucB/samB family C-terminal domain | 1.1E-14 | 352 | 460 |
| PF11798 | IMS_HHH | IMS family HHH motif | 5.2E-06 | 277 | 307 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006281 | DNA repair | Yes |
| GO:0003684 | damaged DNA binding | Yes |
| GO:0006259 | DNA metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0033554 | cellular response to stress | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006974 | cellular response to DNA damage stimulus | No |
| GO:0003674 | molecular_function | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0006950 | response to stress | No |
| GO:0003677 | DNA binding | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0051716 | cellular response to stimulus | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0050896 | response to stimulus | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9767.t1 MEPSGEEPNDDAKASSNAESVEDYETLKYQLLGPSLTKAGQDAVDQRKVSEIIYNASKGSKFFNHEQNRDKVLTV KIERILKEKARLEKLDLSADLRRADQLLAELELTRDLSQHVVHVDCDAFFAAVEELDRPELKTVPMAVGKGVLTT CNYEARKFGCRSGMASFVAKKLCPQLICLPQNYEKYTAKAKEIRAIFAQYDPTFESASIDEAYLNLTAYCTENEL DPEEAVQRMRAEVLEKTKISVSAGIAANAKIAKIASNKNKPNGQFCVPNEREAIMKFMEELPVRKVNGVGRVFER ELDAIGIKTCGDIYPQRAILTKLFGEKAFHFLVQCYLGLGRTKIQPVENYERKSVGTERTFHEIGNKEEFRAKLW SIAEELEKDLARTEFKGRTLVLKVKLATFEVLSRQCQPPRAVSTAKDLYAFSLPMLEKLEKEMPDLKMRLLGLRC TNLVSTKKVGIELFGFTSRPKPASDTSTDPPVEQEIETEEAFEKAAREELQEELDDLEKLSQEVSEAAELKQDGK GVDASQPVYWDCPICSRPQVAEDRTFNDHVDYCLSRQTIKEAVQGASSDVPPEPLAASKTRKRRATESPDPRQKR LFFS* |
| Coding | >Ani_SJS100_1|g9767.t1 ATGGAGCCTTCGGGCGAGGAGCCGAATGATGATGCAAAGGCGTCCAGCAATGCGGAGTCTGTCGAGGACTATGAA ACCTTGAAATATCAACTGCTCGGACCGTCTTTGACCAAAGCGGGTCAGGATGCCGTGGACCAGCGAAAGGTCTCG GAGATTATTTATAATGCCTCCAAAGGATCCAAATTCTTCAATCATGAGCAAAACCGAGACAAGGTCTTGACAGTC AAGATTGAACGCATCCTGAAAGAGAAAGCCCGTCTCGAGAAACTAGATCTGTCGGCTGATCTGCGACGCGCTGAC CAGCTTCTTGCTGAGCTAGAACTGACGCGAGATCTGTCGCAGCATGTTGTTCACGTCGACTGTGATGCTTTCTTT GCTGCAGTGGAAGAGCTCGACCGTCCAGAATTGAAGACTGTCCCTATGGCGGTCGGCAAGGGCGTGCTGACGACC TGCAACTATGAGGCACGAAAGTTTGGCTGTCGGAGCGGCATGGCATCATTCGTGGCGAAGAAACTGTGTCCTCAG CTGATCTGTTTGCCTCAGAACTACGAAAAGTATACTGCAAAGGCAAAGGAGATCCGCGCCATTTTCGCACAGTAT GATCCTACATTTGAGAGCGCTAGTATTGACGAGGCTTATCTCAATCTGACTGCATATTGTACCGAAAATGAGCTT GATCCCGAGGAGGCGGTCCAGCGCATGCGGGCAGAGGTCTTGGAAAAGACCAAGATTTCAGTTTCTGCTGGCATT GCAGCAAATGCAAAAATAGCCAAGATCGCATCCAACAAGAATAAGCCGAACGGCCAATTTTGCGTACCTAACGAG AGAGAAGCGATCATGAAGTTCATGGAGGAGCTACCCGTCCGCAAGGTGAACGGTGTTGGTCGCGTCTTCGAACGT GAACTTGATGCGATCGGTATTAAAACATGCGGCGACATTTATCCGCAGCGTGCCATTTTGACCAAGTTATTCGGA GAAAAAGCGTTTCATTTCTTGGTGCAATGCTACCTCGGCTTAGGTAGAACGAAAATCCAGCCGGTGGAGAACTAT GAGCGCAAGAGTGTGGGAACTGAGAGGACGTTCCACGAGATCGGGAATAAAGAGGAGTTCAGAGCCAAGCTGTGG TCGATAGCCGAGGAGCTTGAGAAAGATCTGGCGCGAACTGAGTTCAAGGGGCGGACACTGGTTCTCAAAGTAAAG CTCGCTACATTTGAGGTGTTGTCACGACAATGCCAGCCTCCACGGGCGGTCTCGACTGCCAAAGATCTGTATGCG TTCTCACTTCCGATGCTGGAGAAGCTTGAAAAGGAAATGCCTGATCTGAAAATGCGCCTGCTTGGTCTCCGGTGC ACCAACCTTGTGAGCACAAAGAAAGTTGGGATCGAGCTCTTCGGCTTCACTTCGCGGCCGAAGCCTGCTTCAGAC ACGTCGACCGATCCTCCGGTTGAGCAGGAGATCGAGACAGAGGAGGCCTTTGAGAAAGCGGCACGGGAGGAACTA CAAGAGGAGCTCGATGATTTGGAGAAGCTGAGCCAGGAGGTATCCGAGGCCGCAGAATTGAAGCAGGATGGGAAA GGAGTAGATGCATCGCAGCCTGTATATTGGGATTGCCCGATTTGTTCTCGACCTCAGGTGGCGGAAGATCGTACA TTCAATGACCATGTGGACTACTGCCTATCACGACAGACGATCAAGGAGGCTGTCCAAGGTGCCTCGAGTGATGTT CCGCCTGAGCCTCTGGCTGCATCGAAGACACGAAAGCGAAGAGCGACGGAATCACCGGATCCGCGACAAAAACGG TTGTTCTTTTCGTGA |
| Transcript | >Ani_SJS100_1|g9767.t1 ATGGAGCCTTCGGGCGAGGAGCCGAATGATGATGCAAAGGCGTCCAGCAATGCGGAGTCTGTCGAGGACTATGAA ACCTTGAAATATCAACTGCTCGGACCGTCTTTGACCAAAGCGGGTCAGGATGCCGTGGACCAGCGAAAGGTCTCG GAGATTATTTATAATGCCTCCAAAGGATCCAAATTCTTCAATCATGAGCAAAACCGAGACAAGGTCTTGACAGTC AAGATTGAACGCATCCTGAAAGAGAAAGCCCGTCTCGAGAAACTAGATCTGTCGGCTGATCTGCGACGCGCTGAC CAGCTTCTTGCTGAGCTAGAACTGACGCGAGATCTGTCGCAGCATGTTGTTCACGTCGACTGTGATGCTTTCTTT GCTGCAGTGGAAGAGCTCGACCGTCCAGAATTGAAGACTGTCCCTATGGCGGTCGGCAAGGGCGTGCTGACGACC TGCAACTATGAGGCACGAAAGTTTGGCTGTCGGAGCGGCATGGCATCATTCGTGGCGAAGAAACTGTGTCCTCAG CTGATCTGTTTGCCTCAGAACTACGAAAAGTATACTGCAAAGGCAAAGGAGATCCGCGCCATTTTCGCACAGTAT GATCCTACATTTGAGAGCGCTAGTATTGACGAGGCTTATCTCAATCTGACTGCATATTGTACCGAAAATGAGCTT GATCCCGAGGAGGCGGTCCAGCGCATGCGGGCAGAGGTCTTGGAAAAGACCAAGATTTCAGTTTCTGCTGGCATT GCAGCAAATGCAAAAATAGCCAAGATCGCATCCAACAAGAATAAGCCGAACGGCCAATTTTGCGTACCTAACGAG AGAGAAGCGATCATGAAGTTCATGGAGGAGCTACCCGTCCGCAAGGTGAACGGTGTTGGTCGCGTCTTCGAACGT GAACTTGATGCGATCGGTATTAAAACATGCGGCGACATTTATCCGCAGCGTGCCATTTTGACCAAGTTATTCGGA GAAAAAGCGTTTCATTTCTTGGTGCAATGCTACCTCGGCTTAGGTAGAACGAAAATCCAGCCGGTGGAGAACTAT GAGCGCAAGAGTGTGGGAACTGAGAGGACGTTCCACGAGATCGGGAATAAAGAGGAGTTCAGAGCCAAGCTGTGG TCGATAGCCGAGGAGCTTGAGAAAGATCTGGCGCGAACTGAGTTCAAGGGGCGGACACTGGTTCTCAAAGTAAAG CTCGCTACATTTGAGGTGTTGTCACGACAATGCCAGCCTCCACGGGCGGTCTCGACTGCCAAAGATCTGTATGCG TTCTCACTTCCGATGCTGGAGAAGCTTGAAAAGGAAATGCCTGATCTGAAAATGCGCCTGCTTGGTCTCCGGTGC ACCAACCTTGTGAGCACAAAGAAAGTTGGGATCGAGCTCTTCGGCTTCACTTCGCGGCCGAAGCCTGCTTCAGAC ACGTCGACCGATCCTCCGGTTGAGCAGGAGATCGAGACAGAGGAGGCCTTTGAGAAAGCGGCACGGGAGGAACTA CAAGAGGAGCTCGATGATTTGGAGAAGCTGAGCCAGGAGGTATCCGAGGCCGCAGAATTGAAGCAGGATGGGAAA GGAGTAGATGCATCGCAGCCTGTATATTGGGATTGCCCGATTTGTTCTCGACCTCAGGTGGCGGAAGATCGTACA TTCAATGACCATGTGGACTACTGCCTATCACGACAGACGATCAAGGAGGCTGTCCAAGGTGCCTCGAGTGATGTT CCGCCTGAGCCTCTGGCTGCATCGAAGACACGAAAGCGAAGAGCGACGGAATCACCGGATCCGCGACAAAAACGG TTGTTCTTTTCGTGA |
| Gene | >Ani_SJS100_1|g9767.t1 ATGGAGCCTTCGGGCGAGGAGCCGAATGATGATGCAAAGGCGTCCAGCAATGCGGAGTCTGTCGAGGACTATGAA ACCTTGAAATATCAACTGCTCGGACCGTCTTTGACCAAAGCGGGTCAGGATGCCGTGGACCAGCGAAAGGTGAGC AGTATGCCACAACGTTCTAGGATGATAGCTAAGGTTAGCAGGTCTCGGAGATTATTTATAATGCCTCCAAAGGAT CCAAATTCTTCAATCATGAGCAAAACCGAGACAAGGTCTTGACAGTCAAGATTGAACGCATCCTGAAAGAGAAAG CCCGTCTCGAGAAACTAGATCTGTCGGCTGATCTGCGACGCGCTGACCAGCTTCTTGCTGAGCTAGAACTGACGC GAGATCTGTCGCAGCATGTTGTTCACGTCGACTGTGATGCTTTCTTTGCTGCAGTGGAAGAGCTCGACCGTCCAG AATTGAAGACTGTCCCTATGGCGGTCGGCAAGGGCGTGCTGACGACCTGCAACTATGAGGCACGAAAGTTTGGCT GTCGGAGCGGCATGGCATCATTCGTGGCGAAGAAACTGTGTCCTCAGCTGATCTGTTTGCCTCAGAACTACGAAA AGTATACTGCAAAGGCAAAGGAGATCCGCGCCATTTTCGCACAGTATGATCCTACATTTGAGAGCGCTAGTATTG ACGAGGCTTATCTCAATCTGACTGCATATTGTACCGAAAATGAGCTTGATCCCGAGGAGGCGGTCCAGCGCATGC GGGCAGAGGTCTTGGAAAAGACCAAGATTTCAGTTTCTGCTGGCATTGCAGCAAATGCAAAAATAGCCAAGATCG CATCCAACAAGAATAAGCCGAACGGCCAATTTTGCGTACCTAACGAGAGAGAAGCGATCATGAAGTTCATGGAGG AGCTACCCGTCCGCAAGGTGAACGGTGTTGGTCGCGTCTTCGAACGTGAACTTGATGCGATCGGTATTAAAACAT GCGGCGACATTTATCCGCAGCGTGCCATTTTGACCAAGTTATTCGGAGAAAAAGCGTTTCATTTCTTGGTGCAAT GCTACCTCGGCTTAGGTAGAACGAAAATCCAGCCGGTGGAGAACTATGAGCGCAAGAGTGTGGGAACTGAGAGGA CGTTCCACGAGATCGGGAATAAAGAGGAGTTCAGAGCCAAGCTGTGGTCGATAGCCGAGGAGCTTGAGAAAGATC TGGCGCGAACTGAGTTCAAGGGGCGGACACTGGTTCTCAAAGTAAAGCTCGCTACATTTGAGGTGTTGTCACGAC AATGCCAGCCTCCACGGGCGGTCTCGACTGCCAAAGATCTGTATGCGTTCTCACTTCCGATGCTGGAGAAGCTTG AAAAGGAAATGCCTGATCTGAAAATGCGCCTGCTTGGTCTCCGGTGCACCAACCTTGTGAGCACAAAGAAAGTTG GGATCGAGCTCTTCGGCTTCACTTCGCGGCCGAAGCCTGCTTCAGACACGTCGACCGATCCTCCGGTTGAGCAGG AGATCGAGACAGAGGAGGCCTTTGAGAAAGCGGCACGGGAGGAACTACAAGAGGAGCTCGATGATTTGGAGAAGC TGAGCCAGGAGGTATCCGAGGCCGCAGAATTGAAGCAGGATGGGAAAGGAGTAGATGCATCGCAGCCTGTATATT GGGATTGCCCGATTTGTTCTCGACCTCAGGTGGCGGAAGATCGTACATTCAATGACCATGTGGACTACTGCCTAT CACGACAGACGATCAAGGAGGCTGTCCAAGGTGCCTCGAGTGATGTTCCGCCTGAGCCTCTGGCTGCATCGAAGA CACGAAAGCGAAGAGCGACGGAATCACCGGATCCGCGACAAAAACGGTTGTTCTTTTCGTGA |