Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g9666.t1
Gene name
Location	scaffold_092:74039..74793
Strand	+
Gene length (bp)	754
Transcript length (bp)	570
Coding sequence length (bp)	570
Protein length (aa)	190

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06127	Mpo1-like	2-hydroxy-palmitic acid dioxygenase Mpo1-like	9.0E-24	4	157

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 41	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	21	40	19
2	73	95	22
3	107	129	22
4	139	161	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g9666.t1 MALNLEKQLLFYGAYHNNPVNVAIHITCVPILLFTGIALASNTPAFVNLPNALQIENLPPNLGTIAAVVYSTFYI LLEPVAGALIAPLIIAGAAWANHLLATYGTSVNYWFAGIHVVSWLAQFVGHGAFERRAPALLDNLVQALLLAPLF VWMEVLFFFGYRPELKARYDENVEKEIAAFKAQKGKTAK*
Coding	>Ani_SJS100_1\|g9666.t1 ATGGCCCTGAATCTCGAAAAGCAGCTTCTGTTTTATGGAGCTTATCACAATAACCCAGTCAATGTTGCGATACAC ATCACATGCGTGCCGATACTCCTGTTCACGGGAATCGCTCTGGCGTCGAATACACCGGCCTTCGTGAACCTGCCC AATGCGCTCCAGATCGAAAACCTTCCTCCTAATCTCGGAACGATCGCAGCCGTCGTATACTCCACGTTCTACATC CTCCTCGAACCTGTCGCTGGGGCACTGATCGCTCCCCTTATAATTGCGGGTGCAGCCTGGGCGAACCATCTACTG GCTACATATGGCACCAGCGTCAACTACTGGTTTGCTGGGATCCATGTAGTGTCCTGGCTGGCTCAGTTTGTGGGC CATGGTGCCTTTGAGCGCAGGGCTCCGGCCTTGCTGGACAACCTGGTCCAAGCACTTCTTCTTGCACCTCTCTTC GTCTGGATGGAAGTGCTCTTCTTTTTCGGCTACCGTCCCGAACTGAAAGCCAGATACGATGAGAATGTGGAGAAG GAGATTGCAGCTTTCAAGGCGCAGAAGGGCAAGACTGCCAAATAA
Transcript	>Ani_SJS100_1\|g9666.t1 ATGGCCCTGAATCTCGAAAAGCAGCTTCTGTTTTATGGAGCTTATCACAATAACCCAGTCAATGTTGCGATACAC ATCACATGCGTGCCGATACTCCTGTTCACGGGAATCGCTCTGGCGTCGAATACACCGGCCTTCGTGAACCTGCCC AATGCGCTCCAGATCGAAAACCTTCCTCCTAATCTCGGAACGATCGCAGCCGTCGTATACTCCACGTTCTACATC CTCCTCGAACCTGTCGCTGGGGCACTGATCGCTCCCCTTATAATTGCGGGTGCAGCCTGGGCGAACCATCTACTG GCTACATATGGCACCAGCGTCAACTACTGGTTTGCTGGGATCCATGTAGTGTCCTGGCTGGCTCAGTTTGTGGGC CATGGTGCCTTTGAGCGCAGGGCTCCGGCCTTGCTGGACAACCTGGTCCAAGCACTTCTTCTTGCACCTCTCTTC GTCTGGATGGAAGTGCTCTTCTTTTTCGGCTACCGTCCCGAACTGAAAGCCAGATACGATGAGAATGTGGAGAAG GAGATTGCAGCTTTCAAGGCGCAGAAGGGCAAGACTGCCAAATAA
Gene	>Ani_SJS100_1\|g9666.t1 ATGGCCCTGAATCTCGAAAAGCAGCTTCTGTTTGTAAGCCTCTGCCGTATCACCTATCACAGTGTTTGGTGCAAG ATATCCATGCTAACGAGCCTCGCAGTATGGAGCTTATCACAATAACCCAGTATGTTATGCTCTTTGCTCCGTTTG TGGCTTGCTCTAATGGTCCCGTCCAGGTCAATGTTGCGATACACATCACATGCGTGCCGATACTCCTGTTCACGG GAATCGCTCTGGTACGAAATGCTATTCCCTCGACCCTTCATAGTGATGGACTACTAACGAGTTATGAATCAACTA GGCGTCGAATACACCGGCCTTCGTGAACCTGCCCAATGCGCTCCAGATCGAAAACCTTCCTCCTAATCTCGGAAC GATCGCAGCCGTCGTATACTCCACGTTCTACATCCTCCTCGAACCTGTCGCTGGGGCACTGATCGCTCCCCTTAT AATTGCGGGTGCAGCCTGGGCGAACCATCTACTGGCTACATATGGCACCAGCGTCAACTACTGGTTTGCTGGGAT CCATGTAGTGTCCTGGCTGGCTCAGTTTGTGGGCCATGGTGCCTTTGAGCGCAGGGCTCCGGCCTTGCTGGACAA CCTGGTCCAAGCACTTCTTCTTGCACCTCTCTTCGTCTGGATGGAAGTGCTCTTCTTTTTCGGCTACCGTCCCGA ACTGAAAGCCAGATACGATGAGAATGTGGAGAAGGAGATTGCAGCTTTCAAGGCGCAGAAGGGCAAGACTGCCAA ATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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