Protein ID | Ani_SJS100_1|g9618.t1 |
Gene name | |
Location | scaffold_091:35725..38546 |
Strand | + |
Gene length (bp) | 2821 |
Transcript length (bp) | 2772 |
Coding sequence length (bp) | 2772 |
Protein length (aa) | 924 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16643 | cNMPbd_u2 | Unstructured region on cNMP-binding protein | 2.0E-40 | 390 | 537 |
PF00027 | cNMP_binding | Cyclic nucleotide-binding domain | 2.6E-21 | 86 | 164 |
PF00027 | cNMP_binding | Cyclic nucleotide-binding domain | 3.2E-10 | 284 | 385 |
PF13516 | LRR_6 | Leucine Rich repeat | 5.9E-01 | 854 | 877 |
PF12937 | F-box-like | F-box-like | 3.3E-06 | 545 | 583 |
PF00646 | F-box | F-box domain | 1.9E-05 | 546 | 578 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9618.t1 MRRHGRASGGSTKAVHPISDTASLLHSFDSITNPNRPVRPSPLTSSNIQALPLDLVDRLRSFPLFQSTPESFLVD VGQHLRPQLHAPNDYILTEGDEAKAIYWLVRGAVSVTSRDGESIYAELEPGAFFGEIGVLMDRPRTATIIARTRC LLVVLTKEDFRKILPRFPDVERAIRDEAQERLMILEKKKKETSVPSVDFVSPVRRGSKRLRDTYSGDLNLTDQDG RSLKSVNKKRKSPSPGLADGSSSALANGLVNVRLLLKELPLFSGLPPDILHFLGLNAQPRSYPPFTDIIKQDSQG REIYFIVRGEVEVLSERAANNHAQSLPNKIEHPSFEVKARLKQGQYFGEVVSLSLAPRRTATVRSISAVECLMIS GDVLVEFWERCPPKVREQVERTAKERLQAASDGDVVMSEAGSDEQPAGELSVDDNFKMRAGRRQSMPLLTLTETE LDSTPTAKGLDEPSVLRPSDPDPFLSVGLDKVRLRSRRSSVAPLTPEEVSGEQQRSSPSSEPRSTSSSFLTLPGA GEFSTPSETVREPRRDNHGYLPDRVLLVIFQHLELHDLLRLRAVSMHWSEILSKSTELLRYLDLSTYNRCVTDDV LVKIICPFVGSRPRYIDISNCFHITDEGFSKLVATCGSNVVTWKMKSVWDVTASAILDMASKANSLQEVDLSNCR KVGDTLLARIVGWVSPGQHKPHDESKPGKASMKPTKQTAAGTVYGCPELKKLTLSYCKHVTDRSMHHIASHAASR IEQMDLTRCTTITDQGFQFWGNARFTNLRRLCLADCTYLTDNAIVHLTNAAKQLRELDLSFCCALSDTATEVLAL QCSQLTYLNMSFCGSAISDPSLRCIGLHLLHLKRLSVRGCVRVTGAGVEAVADGCNQLTSFDVSQCKNLLPWIEG DGPRKYGKKISFETVAQNGRVFR* |
Coding | >Ani_SJS100_1|g9618.t1 ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCCCATTTCCGACACCGCATCGCTCTTA CATTCGTTCGATTCCATCACCAATCCCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATCCACGCCCGAATCCTTCCTGGTCGAT GTCGGCCAGCATCTGCGCCCACAGCTCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGAGAGTATATATGCGGAGCTTGAACCG GGGGCCTTTTTTGGCGAAATCGGTGTACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTTCCCCGACGTGGAACGGGCAATTCGC GACGAGGCCCAGGAGAGACTGATGATCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGACCTGAACCTCACGGATCAGGACGGC AGAAGCTTGAAGTCCGTCAATAAAAAGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTTCTCCGGTTTGCCGCCAGATATCCTC CATTTCCTGGGCCTGAATGCGCAACCGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT CGGGAGATCTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAGAGCAGCAAACAATCATGCGCAATCG TTGCCAAATAAGATCGAGCACCCTAGTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAGTGCGGTGGAATGTCTGATGATTAGC GGTGATGTACTAGTAGAATTCTGGGAGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAGCGACGAGCAACCTGCCGGCGAGCTG AGTGTCGATGATAACTTCAAGATGAGGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCGGCCTTCCGATCCGGATCCTTTCCTC AGTGTGGGCCTAGACAAAGTCCGGCTGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTCGTCCTTTCTCACGCTTCCCGGGGCC GGTGAGTTCTCAACACCGTCAGAGACGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAGGGCGGTCTCTATGCACTGGTCAGAG ATTCTCAGCAAGTCAACGGAGCTGCTTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGACATTAGCAATTGCTTCCATATAACG GACGAAGGGTTCAGCAAGTTGGTTGCGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACAGGAGGTTGATCTGAGCAATTGTCGA AAAGTCGGGGATACGCTCCTAGCTCGAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGACCGTATACGGCTGCCCCGAACTCAAG AAATTAACCTTATCCTATTGCAAGCATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTTCCAATTCTGGGGTAATGCTCGGTTC ACCAATCTCCGCAGACTCTGCTTGGCGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA GCAAAGCAGCTGCGGGAGCTAGATTTGTCGTTCTGTTGTGCTCTGTCCGACACGGCTACAGAAGTACTTGCTCTG CAATGTTCGCAACTGACCTACCTCAATATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATC GGCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCGGGTAACCGGTGCCGGTGTTGAGGCG GTTGCAGACGGCTGCAACCAACTGACATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGC GACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCAAAACGGAAGGGTCTTTCGCTGA |
Transcript | >Ani_SJS100_1|g9618.t1 ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCCCATTTCCGACACCGCATCGCTCTTA CATTCGTTCGATTCCATCACCAATCCCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATCCACGCCCGAATCCTTCCTGGTCGAT GTCGGCCAGCATCTGCGCCCACAGCTCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGAGAGTATATATGCGGAGCTTGAACCG GGGGCCTTTTTTGGCGAAATCGGTGTACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTTCCCCGACGTGGAACGGGCAATTCGC GACGAGGCCCAGGAGAGACTGATGATCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGACCTGAACCTCACGGATCAGGACGGC AGAAGCTTGAAGTCCGTCAATAAAAAGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTTCTCCGGTTTGCCGCCAGATATCCTC CATTTCCTGGGCCTGAATGCGCAACCGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT CGGGAGATCTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAGAGCAGCAAACAATCATGCGCAATCG TTGCCAAATAAGATCGAGCACCCTAGTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAGTGCGGTGGAATGTCTGATGATTAGC GGTGATGTACTAGTAGAATTCTGGGAGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAGCGACGAGCAACCTGCCGGCGAGCTG AGTGTCGATGATAACTTCAAGATGAGGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCGGCCTTCCGATCCGGATCCTTTCCTC AGTGTGGGCCTAGACAAAGTCCGGCTGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTCGTCCTTTCTCACGCTTCCCGGGGCC GGTGAGTTCTCAACACCGTCAGAGACGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAGGGCGGTCTCTATGCACTGGTCAGAG ATTCTCAGCAAGTCAACGGAGCTGCTTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGACATTAGCAATTGCTTCCATATAACG GACGAAGGGTTCAGCAAGTTGGTTGCGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACAGGAGGTTGATCTGAGCAATTGTCGA AAAGTCGGGGATACGCTCCTAGCTCGAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGACCGTATACGGCTGCCCCGAACTCAAG AAATTAACCTTATCCTATTGCAAGCATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTTCCAATTCTGGGGTAATGCTCGGTTC ACCAATCTCCGCAGACTCTGCTTGGCGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA GCAAAGCAGCTGCGGGAGCTAGATTTGTCGTTCTGTTGTGCTCTGTCCGACACGGCTACAGAAGTACTTGCTCTG CAATGTTCGCAACTGACCTACCTCAATATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATC GGCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCGGGTAACCGGTGCCGGTGTTGAGGCG GTTGCAGACGGCTGCAACCAACTGACATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGC GACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCAAAACGGAAGGGTCTTTCGCTGA |
Gene | >Ani_SJS100_1|g9618.t1 ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCCCATTTCCGACACCGCATCGCTCTTA CATTCGTTCGATTCCATCACCAATCCCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATCCACGCCCGAATCCTTCCTGGTCGAT GTCGGCCAGCATCTGCGCCCACAGCTCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGAGAGTATATATGCGGAGCTTGAACCG GGGGCCTTTTTTGGCGAAATCGGTGTACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTTCCCCGACGTGGAACGGGCAATTCGC GACGAGGCCCAGGAGAGACTGATGATCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGACCTGAACCTCACGGATCAGGACGGC AGAAGCTTGAAGTCCGTCAATAAAAAGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTTCTCCGGTTTGCCGCCAGATATCCTC CATTTCCTGGGCCTGAATGCGCAACCGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT CGGGAGATCTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAGAGCAGCAAACAATCATGCGCAATCG TTGCCAAATAAGATCGAGCACCCTAGTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAGTGCGGTGGAATGTCTGATGATTAGC GGTGATGTACTAGTAGAATTCTGGGAGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAGCGACGAGCAACCTGCCGGCGAGCTG AGTGTCGATGATAACTTCAAGATGAGGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCGGCCTTCCGATCCGGATCCTTTCCTC AGTGTGGGCCTAGACAAAGTCCGGCTGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTCGTCCTTTCTCACGCTTCCCGGGGCC GGTGAGTTCTCAACACCGTCAGAGACGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAGGGCGGTCTCTATGCACTGGTCAGAG ATTCTCAGCAAGTCAACGGAGCTGCTTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGACATTAGCAATTGCTTCCATATAACG GACGAAGGGTTCAGCAAGTTGGTTGCGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACAGGAGGTTGATCTGAGCAATTGTCGA AAAGTCGGGGATACGCTCCTAGCTCGAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGACCGTATACGGCTGCCCCGAACTCAAG AAATTAACCTTATCCTATTGCAAGCATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTTCCAATTCTGGGGTAATGCTCGGTTC ACCAATCTCCGCAGACTCTGCTTGGCGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA GCAAAGCAGCTGCGGGAGCTAGATTTGGTAAGCTAGATCTACAATGTCTAAGTGACGACGGACTAACAATTGGCA GTCGTTCTGTTGTGCTCTGTCCGACACGGCTACAGAAGTACTTGCTCTGCAATGTTCGCAACTGACCTACCTCAA TATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATCGGCCTGCACCTGTTACATCTTAAACG TCTTTCCGTCCGAGGCTGTGTTCGGGTAACCGGTGCCGGTGTTGAGGCGGTTGCAGACGGCTGCAACCAACTGAC ATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGCGACGGACCCCGCAAATACGGGAAGAA GATATCATTTGAGACTGTTGCGCAAAACGGAAGGGTCTTTCGCTGA |