© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9581.t1 |
| Gene name | |
| Location | scaffold_090:29645..31144 |
| Strand | - |
| Gene length (bp) | 1499 |
| Transcript length (bp) | 1143 |
| Coding sequence length (bp) | 1143 |
| Protein length (aa) | 381 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00664 | ABC_membrane | ABC transporter transmembrane region | 1.9E-05 | 76 | 171 |
| PF00664 | ABC_membrane | ABC transporter transmembrane region | 2.5E-13 | 174 | 318 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0140359 | ABC-type transporter activity | Yes |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0015399 | primary active transmembrane transporter activity | No |
| GO:0043167 | ion binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0003674 | molecular_function | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0006810 | transport | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
| GO:0005488 | binding | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0043168 | anion binding | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0097159 | organic cyclic compound binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 60 | 82 | 22 |
| 2 | 110 | 132 | 22 |
| 3 | 180 | 202 | 22 |
| 4 | 269 | 291 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9581.t1 MQLHKPASVHRSLVSTDEIAGHMASATDEDNELNNDTVKALVSDSLSPLRREGTWSVYNYYYQSAGFIPFATCLA FIVVEAVSGDFKTLWIQWWVEANEESPNKDVGMYLGVYAVLFVIQLVGTAGGLWLLIMNVINNTALNLHTDLLSA TLSALLRFFQDTEIGALTNRFRFASCVVKLVILCIVSKYLAVAVPALLVSLVILQRYYLRTSRQVRLLDLEAKAP LYTHFTEAVHGVTTLRAFRMERWFQEKMHMLLNKSQGPFYMLYCIQQWLTLVMGLIVAALAVIIAATTTSLADQY NGAAVGVALSLILTFNSTLSSTLRSWTSLETSIGAVSRVQQFVQDTPREANNDLMGSVVPRALGHSHFTIEFDNI TAAYG* |
| Coding | >Ani_SJS100_1|g9581.t1 ATGCAACTCCACAAGCCCGCAAGCGTGCACAGGTCCCTAGTGAGCACTGATGAAATTGCTGGGCATATGGCTTCC GCGACTGATGAGGACAATGAGCTGAACAATGATACTGTGAAGGCTCTAGTTTCAGACTCACTGAGTCCTCTGCGA CGCGAAGGGACCTGGTCGGTGTACAATTACTATTATCAAAGTGCTGGGTTCATTCCATTTGCAACCTGTCTAGCT TTTATTGTTGTGGAAGCAGTCAGTGGGGACTTTAAAACTCTGTGGATCCAGTGGTGGGTGGAGGCAAACGAAGAG AGTCCTAACAAAGATGTGGGTATGTATTTGGGAGTGTATGCTGTCCTCTTCGTGATACAGCTCGTAGGTACCGCA GGTGGATTGTGGCTCCTTATCATGAATGTAATCAATAACACTGCGTTGAATCTGCATACAGATCTTCTCTCTGCG ACGCTCAGTGCGCTGCTCAGATTCTTTCAAGACACAGAAATCGGGGCCTTGACAAATAGATTCAGATTCGCAAGC TGCGTGGTCAAATTGGTCATTCTTTGCATCGTCAGCAAATACCTAGCAGTTGCTGTGCCGGCGCTTCTGGTCAGC CTAGTGATCCTTCAGAGATATTACCTTCGCACTTCTCGGCAGGTACGACTGCTGGATCTGGAAGCCAAGGCTCCG CTTTATACGCATTTCACGGAAGCCGTGCATGGAGTCACCACTCTCCGTGCTTTCAGAATGGAACGCTGGTTCCAG GAGAAGATGCACATGCTCCTTAATAAATCACAAGGGCCTTTTTATATGCTGTACTGCATACAGCAATGGCTGACA CTCGTGATGGGCTTGATCGTTGCGGCGTTGGCAGTGATTATCGCGGCGACGACAACCTCTTTGGCCGACCAGTAT AACGGTGCTGCGGTCGGTGTTGCCCTTAGCTTAATCCTAACCTTCAACAGCACACTTTCAAGCACTCTCCGATCA TGGACTAGTCTTGAGACGAGCATCGGGGCAGTTTCGCGAGTCCAACAATTTGTGCAAGACACTCCTCGTGAGGCA AACAATGACCTGATGGGCAGTGTAGTCCCTCGGGCATTGGGACATTCTCATTTTACAATCGAGTTCGATAACATA ACAGCAGCATACGGGTAA |
| Transcript | >Ani_SJS100_1|g9581.t1 ATGCAACTCCACAAGCCCGCAAGCGTGCACAGGTCCCTAGTGAGCACTGATGAAATTGCTGGGCATATGGCTTCC GCGACTGATGAGGACAATGAGCTGAACAATGATACTGTGAAGGCTCTAGTTTCAGACTCACTGAGTCCTCTGCGA CGCGAAGGGACCTGGTCGGTGTACAATTACTATTATCAAAGTGCTGGGTTCATTCCATTTGCAACCTGTCTAGCT TTTATTGTTGTGGAAGCAGTCAGTGGGGACTTTAAAACTCTGTGGATCCAGTGGTGGGTGGAGGCAAACGAAGAG AGTCCTAACAAAGATGTGGGTATGTATTTGGGAGTGTATGCTGTCCTCTTCGTGATACAGCTCGTAGGTACCGCA GGTGGATTGTGGCTCCTTATCATGAATGTAATCAATAACACTGCGTTGAATCTGCATACAGATCTTCTCTCTGCG ACGCTCAGTGCGCTGCTCAGATTCTTTCAAGACACAGAAATCGGGGCCTTGACAAATAGATTCAGATTCGCAAGC TGCGTGGTCAAATTGGTCATTCTTTGCATCGTCAGCAAATACCTAGCAGTTGCTGTGCCGGCGCTTCTGGTCAGC CTAGTGATCCTTCAGAGATATTACCTTCGCACTTCTCGGCAGGTACGACTGCTGGATCTGGAAGCCAAGGCTCCG CTTTATACGCATTTCACGGAAGCCGTGCATGGAGTCACCACTCTCCGTGCTTTCAGAATGGAACGCTGGTTCCAG GAGAAGATGCACATGCTCCTTAATAAATCACAAGGGCCTTTTTATATGCTGTACTGCATACAGCAATGGCTGACA CTCGTGATGGGCTTGATCGTTGCGGCGTTGGCAGTGATTATCGCGGCGACGACAACCTCTTTGGCCGACCAGTAT AACGGTGCTGCGGTCGGTGTTGCCCTTAGCTTAATCCTAACCTTCAACAGCACACTTTCAAGCACTCTCCGATCA TGGACTAGTCTTGAGACGAGCATCGGGGCAGTTTCGCGAGTCCAACAATTTGTGCAAGACACTCCTCGTGAGGCA AACAATGACCTGATGGGCAGTGTAGTCCCTCGGGCATTGGGACATTCTCATTTTACAATCGAGTTCGATAACATA ACAGCAGCATACGGGTAA |
| Gene | >Ani_SJS100_1|g9581.t1 ATGCAACTCCACAAGCCCGCAAGCGTGCACAGGTCCCTAGTGAGCACTGATGAAATTGCTGGGCATATGGCTTCC GCGACTGATGAGGACAATGAGCTGAACAATGATACTGTGAAGGCTCTAGTTTCAGACTCACTGAGTCCTCTGCGA CGCGAAGGGACCTGGTCGGTGTACAATTACTATTATCAAAGTGCTGGGTTCATTCCATTTGCAACCTGTCTAGCT TTTATTGTTGTGGAAGCAGTCAGTGGGGACTTTAAAAGTGCGTCCCTGGTACTTATGATCCTGTTTTACGTCTCT TAAGCTGATATCTCCGGTTTTTGTTAGCTCTGTGGATCCAGTGGTGGGTGGAGGCAAACGAAGAGAGTCCTAACA AAGATGTGGGTATGTATTTGGGAGTGTATGCTGTCCTCTTCGTGATACAGCTCGTAGGTACCGCAGGTGGATTGT GGTAAGTAATTCCCATGATTCAAGTCATTATTGTCAATTACTGAAATGCTAGCTTACGCCTTTGGTCGTCCCAGG CTCCTTATCATGAATGTAATCAATAACACTGCGTTGAATCTGCATACAGATCTTCTCTCTGCGACGCTCAGGTAT TCCCAAATATTCTCTTCAATTTTTACATGTCTTTGCTGACTATCCAGGGCAGTGCGCTGCTCAGATTCTTTCAAG ACACAGAAATCGGGGCCTTGACAAATAGATTCAGTAAGATATGGAGTTGATTGACATGATGCTTCCTTTAGTGGC ATCTATGTTCTTAACGGGTAATGCTCTTCCCCCTTTCCCTTCTTTGCCTCCTTATCAACACGTCGGACTGGCGGA GTTAAGGGATCACTGGGTTCAAGAAGCTAACACCAGCCATCATAGGATTCGCAAGCTGCGTGGTCAAATTGGTCA TTCTTTGCATCGTCAGCAAATACCTAGCAGTTGCTGTGCCGGCGCTTCTGGTCAGCCTAGTGATCCTTCAGAGAT ATTACCTTCGCACTTCTCGGCAGGTACGACTGCTGGATCTGGAAGCCAAGGCTCCGCTTTATACGCATTTCACGG AAGCCGTGCATGGAGTCACCACTCTCCGTGCTTTCAGAATGGAACGCTGGTTCCAGGAGAAGATGCACATGCTCC TTAATAAATCACAAGGGCCTTTTTATATGCTGTACTGCATACAGCAATGGCTGACACTCGTGATGGGCTTGATCG TTGCGGCGTTGGCAGTGATTATCGCGGCGACGACAACCTCTTTGGCCGACCAGTATAACGGTGCTGCGGTCGGTG TTGCCCTTAGCTTAATCCTAACCTTCAACAGCACACTTTCAAGCACTCTCCGATCATGGACTAGTCTTGAGACGA GCATCGGGGCAGTTTCGCGAGTCCAACAATTTGTGCAAGACACTCCTCGTGAGGCAAACAATGACCTGATGGGCA GTGTAGTCCCTCGGGCATTGGGACATTCTCATTTTACAATCGAGTTCGATAACATAACAGCAGCATACGGGTAA |