Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9554.t1
Gene name
Locationscaffold_089:57652..58441
Strand+
Gene length (bp)789
Transcript length (bp)579
Coding sequence length (bp)579
Protein length (aa) 193

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 37 59 22
2 72 94 22
3 116 138 22
4 155 177 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9554.t1
MALDIVLTACAIAGAKEGVGRHFVDFHSSEDLHHAMLWWWLGQCLYICASGIAKVSIALALLRLSVQKYQRMILW
TVMGASICISLIFWFLMLLQCHPVSEFWERTGTGKCLNTDILINVAYVYSGICAICDFALGLLPIDLVRQLQINP
KTKMALGATLSLGCVASAAVILRIPCLHYYKDIDFLCKCHTL*
Coding >Ani_SJS100_1|g9554.t1
ATGGCTCTTGATATCGTGCTTACCGCATGCGCAATCGCTGGTGCAAAGGAAGGCGTTGGCCGGCATTTCGTCGAT
TTCCACAGCTCCGAAGACTTACACCACGCCATGCTGTGGTGGTGGCTGGGTCAGTGCCTCTATATCTGCGCGTCC
GGGATCGCCAAAGTATCCATTGCGCTCGCGCTTCTCCGACTGTCGGTCCAGAAGTACCAGCGCATGATCCTGTGG
ACCGTTATGGGAGCGTCGATTTGTATCAGCTTGATATTCTGGTTCCTCATGCTTTTACAATGTCATCCCGTTTCG
GAGTTTTGGGAGCGGACAGGGACGGGCAAGTGCTTGAACACTGATATATTGATTAATGTGGCGTACGTATACAGT
GGGATCTGCGCCATCTGTGACTTTGCACTGGGGCTGCTGCCCATTGATCTCGTTCGCCAGCTGCAAATCAATCCA
AAGACAAAGATGGCGCTGGGCGCGACCCTGAGTTTAGGTTGTGTGGCGAGTGCAGCTGTTATCCTTCGGATTCCC
TGCCTGCATTACTACAAGGACATTGATTTCTTGTGTAAGTGCCACACATTGTGA
Transcript >Ani_SJS100_1|g9554.t1
ATGGCTCTTGATATCGTGCTTACCGCATGCGCAATCGCTGGTGCAAAGGAAGGCGTTGGCCGGCATTTCGTCGAT
TTCCACAGCTCCGAAGACTTACACCACGCCATGCTGTGGTGGTGGCTGGGTCAGTGCCTCTATATCTGCGCGTCC
GGGATCGCCAAAGTATCCATTGCGCTCGCGCTTCTCCGACTGTCGGTCCAGAAGTACCAGCGCATGATCCTGTGG
ACCGTTATGGGAGCGTCGATTTGTATCAGCTTGATATTCTGGTTCCTCATGCTTTTACAATGTCATCCCGTTTCG
GAGTTTTGGGAGCGGACAGGGACGGGCAAGTGCTTGAACACTGATATATTGATTAATGTGGCGTACGTATACAGT
GGGATCTGCGCCATCTGTGACTTTGCACTGGGGCTGCTGCCCATTGATCTCGTTCGCCAGCTGCAAATCAATCCA
AAGACAAAGATGGCGCTGGGCGCGACCCTGAGTTTAGGTTGTGTGGCGAGTGCAGCTGTTATCCTTCGGATTCCC
TGCCTGCATTACTACAAGGACATTGATTTCTTGTGTAAGTGCCACACATTGTGA
Gene >Ani_SJS100_1|g9554.t1
ATGGTAATAAACCCCCTGGATTTTCCCTTCTCCGCGGTCCAATCGGACTGGGCTGGTATTCAAGCCTAAGCTCAC
TACATCATGAATCACTAACATGTTTCCAGGCTCTTGATATCGTGCTTACCGCATGCGCAATCGCTGGTGCAAAGG
AAGGCGTTGGCCGGCATTTCGTCGATTTCCACAGCTCCGAAGACTTACACCACGCCATGCTGGTACGTAAAATGA
CGTCGTCTTCAGCCCACATGAGATACTGAACGGCCTGTCTAGTGGTGGTGGCTGGGTCAGTGCCTCTATATCTGC
GCGTCCGGGATCGCCAAAGTATCCATTGCGCTCGCGCTTCTCCGACTGTCGGTCCAGAAGTACCAGCGCATGATC
CTGTGGACCGTTATGGGAGCGTCGATTTGTATCAGCTTGATATTCTGGTTCCTCATGCTTTTACAATGTCATCCC
GTTTCGGAGTTTTGGGAGCGGACAGGGACGGGCAAGTGCTTGAACACTGATATATTGATTAATGTGGCGTACGTA
TACAGTGGGATCTGCGCCATCTGTGACTTTGCACTGGGGCTGCTGCCCATTGATCTCGTTCGCCAGCTGCAAATC
AATCCAAAGACAAAGATGGCGCTGGGCGCGACCCTGAGTTTAGGTTGTGTGTATGTAAACTGTGCGATGCTGTTG
GTACAGTGGCTGATATTTGGCGTCTCCAGGGCGAGTGCAGCTGTTATCCTTCGGATTCCCTGCCTGCATTACTAC
AAGGACATTGATTTCTTGTGTAAGTGCCACACATTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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