Protein ID | Ani_SJS100_1|g9538.t1 |
Gene name | |
Location | scaffold_088:124924..125308 |
Strand | - |
Gene length (bp) | 384 |
Transcript length (bp) | 384 |
Coding sequence length (bp) | 384 |
Protein length (aa) | 128 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08229 | SHR3_chaperone | ER membrane protein SH3 | 1.5E-44 | 1 | 126 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 32 | 22 |
2 | 71 | 93 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9538.t1 MKLYKPSESNMLFDGASLVLYMCGITVYIANIVKGLRLVSGGVYGDELVKGGEEEVEQGQILGREDSLKVLAASN TILALVLVGVLVLQAGQWYAERKEAQEVESFASSSSKGKKEEGSEGGKKKKN* |
Coding | >Ani_SJS100_1|g9538.t1 ATGAAGCTGTACAAACCCTCGGAATCGAATATGTTGTTCGATGGCGCCAGTCTCGTGCTGTATATGTGTGGAATT ACGGTCTATATTGCGAATATTGTGAAGGGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGATGAGTTGGTCAAA GGTGGGGAGGAGGAGGTCGAGCAAGGGCAGATTCTGGGTAGGGAGGATAGTTTGAAGGTGTTGGCGGCGAGTAAT ACTATCTTGGCGCTGGTGTTGGTGGGTGTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAGAGGAAGGAGGCG CAGGAGGTGGAGAGTTTTGCTTCTTCGAGTTCGAAGGGGAAGAAGGAGGAGGGGAGTGAGGGGGGGAAGAAGAAG AAGAATTGA |
Transcript | >Ani_SJS100_1|g9538.t1 ATGAAGCTGTACAAACCCTCGGAATCGAATATGTTGTTCGATGGCGCCAGTCTCGTGCTGTATATGTGTGGAATT ACGGTCTATATTGCGAATATTGTGAAGGGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGATGAGTTGGTCAAA GGTGGGGAGGAGGAGGTCGAGCAAGGGCAGATTCTGGGTAGGGAGGATAGTTTGAAGGTGTTGGCGGCGAGTAAT ACTATCTTGGCGCTGGTGTTGGTGGGTGTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAGAGGAAGGAGGCG CAGGAGGTGGAGAGTTTTGCTTCTTCGAGTTCGAAGGGGAAGAAGGAGGAGGGGAGTGAGGGGGGGAAGAAGAAG AAGAATTGA |
Gene | >Ani_SJS100_1|g9538.t1 ATGAAGCTGTACAAACCCTCGGAATCGAATATGTTGTTCGATGGCGCCAGTCTCGTGCTGTATATGTGTGGAATT ACGGTCTATATTGCGAATATTGTGAAGGGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGATGAGTTGGTCAAA GGTGGGGAGGAGGAGGTCGAGCAAGGGCAGATTCTGGGTAGGGAGGATAGTTTGAAGGTGTTGGCGGCGAGTAAT ACTATCTTGGCGCTGGTGTTGGTGGGTGTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAGAGGAAGGAGGCG CAGGAGGTGGAGAGTTTTGCTTCTTCGAGTTCGAAGGGGAAGAAGGAGGAGGGGAGTGAGGGGGGGAAGAAGAAG AAGAATTGA |