Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9515.t1
Gene name
Locationscaffold_088:63220..63835
Strand+
Gene length (bp)615
Transcript length (bp)231
Coding sequence length (bp)231
Protein length (aa) 77

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02238 COX7a Cytochrome c oxidase subunit VII 8.5E-22 16 68

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 41 63 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9515.t1
MFRTAPRMAGFVFRENRVPYYQRLFQQHDGKRQWWKTERSGYLMWPYLISVYGMGIATTYAMGRMVFGHKTWFGK
A*
Coding >Ani_SJS100_1|g9515.t1
ATGTTCCGCACCGCTCCTCGTATGGCTGGATTCGTGTTCCGTGAGAACCGTGTCCCTTACTACCAGCGTCTTTTC
CAGCAGCACGACGGCAAGCGCCAGTGGTGGAAGACTGAGCGCAGTGGTTACCTCATGTGGCCCTACCTGATCTCC
GTCTACGGAATGGGCATCGCTACCACCTACGCTATGGGTCGTATGGTCTTTGGCCACAAGACCTGGTTCGGCAAG
GCGTAA
Transcript >Ani_SJS100_1|g9515.t1
ATGTTCCGCACCGCTCCTCGTATGGCTGGATTCGTGTTCCGTGAGAACCGTGTCCCTTACTACCAGCGTCTTTTC
CAGCAGCACGACGGCAAGCGCCAGTGGTGGAAGACTGAGCGCAGTGGTTACCTCATGTGGCCCTACCTGATCTCC
GTCTACGGAATGGGCATCGCTACCACCTACGCTATGGGTCGTATGGTCTTTGGCCACAAGACCTGGTTCGGCAAG
GCGTAA
Gene >Ani_SJS100_1|g9515.t1
ATGTTCCGCACCGCTCCTCGTATGGCTGGGTATGTTCACTGATTTCATTTCCTTACTTGTTCCCCCGCATGGCTT
CCTGAGCGCGGCCGGGCTGACGGCTTGTCGGTCGGGACTGTTGGCTGCTCAATTGCGTAAATATTCCATGCAATT
GGGACTCGGAAGCGAACCTTTACACTGGATTGGACTTGCTAACATATTTGCCTTCCCATAGATTCGTGTTCCGTG
AGAACCGTGTCCCTTACTACCAGCGTCTTTTCCAGCAGCACGACGGCAAGCGCCAGTGGTGGAAGGTCCGTTGAT
CTGCGAATCGATCGTAACTTACGAAAGCAACAAGAAAGCCTAACAAACGAACTCTCTATAGACTGAGCGCAGTGG
TTACCTCATGTGGCCCTACCTGATCTCCGTCTACGGAATGGGCATCGGTAAGCGCCTTAAATACATAAATAAAGA
TGGACCACGGCTAATGCATATCTTCCTTAGCTACCACCTACGCTATGGGTCGTATGGTCTTTGTGAGTTGCACCT
TGGAATTTGGGTTTCAAAGGGGAACCTGTGGAATAACAGATTTACTAATGCTCATCCTAGGGCCACAAGACCTGG
TTCGGCAAGGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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