Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9501.t1
Gene name
Locationscaffold_088:29447..30813
Strand+
Gene length (bp)1366
Transcript length (bp)1176
Coding sequence length (bp)1176
Protein length (aa) 392

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05739 SNARE SNARE domain 1.2E-12 275 327

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 313 330 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9501.t1
MWRDRTNLYISYRQSFAHHPAKKPRYLGASNGFSDSLSQPEESRRLISETGGLDDDGDAIIEMDVLPPRWVDVQE
EVTELLADIAQKSSHLDKLHQKHLLPGFGDEDVRKQDEVVIERLTQDITRAFHECQKAVKKIETMVREAQQQGGV
SSGDETMAKNLQISLAARVQEASARFRKKQSTYLKKLRGLEGGSAPFERSPTPMQNPYTDPSLMESDADKSFSQS
TLMQTSQRLTGQNDAAIEQREREINDIAKGIIELSDIFRELQSMVIDQGTMLDRIDYNIERMGTEVKAADKELKV
ATNYQRRTVKRKIMLLLVIIVAGLFIVLLVKPKKHSSPDPAPAPAPPPPPQTNEQPPAMAPRAFHTIYRRKRSPS
SLRTARNKWGDPDIFR*
Coding >Ani_SJS100_1|g9501.t1
ATGTGGCGGGACCGTACCAACCTCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCACGT
TATCTCGGAGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACA
GGAGGACTCGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAGGAG
GAAGTGACGGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTA
CCTGGATTCGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACGCGC
GCCTTCCATGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTT
AGCAGCGGCGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCTCGG
TTTCGGAAGAAACAGAGTACCTATTTGAAGAAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCC
CCGACACCGATGCAGAATCCATACACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAATCT
ACACTAATGCAAACGTCTCAACGACTGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAAC
GACATCGCGAAAGGAATTATCGAGCTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGTACT
ATGCTGGATCGGATAGACTATAATATTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTG
GCTACGAACTACCAACGACGTACAGTGAAGCGCAAGATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTTT
ATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTCCCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCCCG
CAAACTAATGAACAGCCGCCCGCAATGGCTCCTCGTGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCCTCT
TCGTTACGGACTGCGAGAAACAAATGGGGTGATCCGGATATATTTCGATAG
Transcript >Ani_SJS100_1|g9501.t1
ATGTGGCGGGACCGTACCAACCTCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCACGT
TATCTCGGAGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACA
GGAGGACTCGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAGGAG
GAAGTGACGGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTA
CCTGGATTCGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACGCGC
GCCTTCCATGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTT
AGCAGCGGCGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCTCGG
TTTCGGAAGAAACAGAGTACCTATTTGAAGAAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCC
CCGACACCGATGCAGAATCCATACACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAATCT
ACACTAATGCAAACGTCTCAACGACTGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAAC
GACATCGCGAAAGGAATTATCGAGCTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGTACT
ATGCTGGATCGGATAGACTATAATATTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTG
GCTACGAACTACCAACGACGTACAGTGAAGCGCAAGATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTTT
ATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTCCCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCCCG
CAAACTAATGAACAGCCGCCCGCAATGGCTCCTCGTGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCCTCT
TCGTTACGGACTGCGAGAAACAAATGGGGTGATCCGGATATATTTCGATAG
Gene >Ani_SJS100_1|g9501.t1
ATGTGGCGGGACCGTACCAACCTGTAATGCATCCCGGGCTAAGTTATGGTGGATAGCGAAGATAAGGAACTAACA
ACTATCTCAAAACAGCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCACGTTATCTCGG
AGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACAGGAGGACT
CGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAGGAGGAAGTGAC
GGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTACCTGGATT
CGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACGCGCGCCTTCCA
TGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTTAGCAGCGG
CGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCTCGGTTTCGGAA
GAAACAGAGTACCTATTTGAAGAGTGAGTTTATCCTGGGCTCAGCTGCGTCTGTTCGTTGAGCTAACCGAGTTGC
CTGGTAGAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCCCCGACACCGATGCAGAATCCATAC
ACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAATCTACACTAATGCAAACGTCTCAACGA
CTGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAACGACATCGCGAAAGGAATTATCGAG
CTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGTACTATGCTGGATCGGATAGACTATAAT
ATTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTGGTACGTTTGCGTCCGGTGCAGCCA
CCCGAAGTTAAGTTTCCACTAACCAATCTGCATATTGTAGGCTACGAACTACCAACGACGTACAGTGAAGCGCAA
GATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTTTATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTC
CCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCCCGCAAACTAATGAACAGCCGCCCGCAATGGCTCCTCG
TGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCCTCTTCGTTACGGACTGCGAGAAACAAATGGGGTGATCC
GGATATATTTCGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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